FFCP PHASE1:Mm9::chr17:56615789..56615883,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19280|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=0bp_to_ENSMUST00000143018_5end|description=CAGE_peak_1_at_Ptprs_5end|id=chr17:56615789..56615883,-|ontology_enrichment_celltype=CL:0002319!1.87e-19!43;CL:0000221!3.83e-19!44;CL:0000133!3.83e-19!44;CL:0000540!2.90e-17!33;CL:0000047!2.90e-17!33;CL:0000031!2.90e-17!33;CL:0000404!2.90e-17!33;CL:0000055!3.22e-17!50;CL:0000393!1.58e-15!39;CL:0000211!1.58e-15!39;CL:0000117!2.43e-14!23;CL:0000337!2.43e-14!23;CL:0002321!8.34e-07!70;CL:0000220!8.34e-07!70|ontology_enrichment_celltype_v019_2=CL:0002319,1.87e-19,43;CL:0000221,3.82e-19,44;CL:0000133,3.82e-19,44;CL:0000540,2.89e-17,33;CL:0000047,2.89e-17,33;CL:0000031,2.89e-17,33;CL:0000404,2.89e-17,33;CL:0000393,1.57e-15,39;CL:0000211,1.57e-15,39;CL:0000117,2.42e-14,23;CL:0000337,2.42e-14,23;CL:0002321,8.78e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.49e-37!73;UBERON:0005743!1.49e-37!73;UBERON:0000073!1.27e-36!75;UBERON:0001016!1.27e-36!75;UBERON:0004121!2.65e-33!102;UBERON:0000924!2.65e-33!102;UBERON:0006601!2.65e-33!102;UBERON:0002346!1.36e-30!71;UBERON:0003075!1.36e-30!71;UBERON:0007284!1.36e-30!71;UBERON:0001049!2.85e-27!52;UBERON:0005068!2.85e-27!52;UBERON:0006241!2.85e-27!52;UBERON:0007135!2.85e-27!52;UBERON:0000033!3.69e-26!63;UBERON:0000955!7.93e-26!50;UBERON:0006238!7.93e-26!50;UBERON:0002616!2.60e-25!49;UBERON:0003056!1.30e-23!49;UBERON:0003080!2.85e-21!40;UBERON:0002780!7.95e-21!39;UBERON:0001890!7.95e-21!39;UBERON:0006240!7.95e-21!39;UBERON:0002020!1.53e-20!34;UBERON:0002791!1.02e-17!29;UBERON:0003528!1.02e-17!29;UBERON:0001893!1.02e-17!29;UBERON:0000153!6.54e-15!94;UBERON:0007811!2.30e-14!86;UBERON:0000956!2.48e-13!21;UBERON:0001869!2.48e-13!21;UBERON:0000203!2.48e-13!21;UBERON:0002619!1.27e-10!17;UBERON:0000025!8.83e-08!114;UBERON:0004111!6.32e-07!122;UBERON:0002021!6.41e-07!10;UBERON:0000411!6.41e-07!10;UBERON:0001950!6.41e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.48e-37,73;UBERON:0001016,1.26e-36,75;UBERON:0004121,3.14e-33,95;UBERON:0000924,3.14e-33,95;UBERON:0006601,3.14e-33,95;UBERON:0002346,2.92e-31,64;UBERON:0003075,2.92e-31,64;UBERON:0007284,2.92e-31,64;UBERON:0000073,2.13e-28,54;UBERON:0001049,2.83e-27,52;UBERON:0005068,2.83e-27,52;UBERON:0006241,2.83e-27,52;UBERON:0007135,2.83e-27,52;UBERON:0010371,5.60e-27,73;UBERON:0000955,2.69e-24,47;UBERON:0006238,2.69e-24,47;UBERON:0002616,8.66e-24,46;UBERON:0003056,1.29e-23,49;UBERON:0010314,7.80e-23,92;UBERON:0003080,2.84e-21,40;UBERON:0002780,7.91e-21,39;UBERON:0001890,7.91e-21,39;UBERON:0006240,7.91e-21,39;UBERON:0002020,1.53e-20,34;UBERON:0003528,1.01e-17,29;UBERON:0002791,1.01e-17,29;UBERON:0001893,1.01e-17,29;UBERON:0000956,2.48e-13,21;UBERON:0001869,2.48e-13,21;UBERON:0000203,2.48e-13,21;UBERON:0002619,1.26e-10,17;UBERON:0000025,9.78e-08,114;UBERON:0002021,6.41e-07,10;UBERON:0000411,6.41e-07,10;UBERON:0001950,6.41e-07,10;UBERON:0004111,6.94e-07,122|phase1_expression=45.1619748835519,0.697950815278722,0,0,0.500895729946347,9.06548068324205,9.34450562382103,10.5881125222093,7.74337971834167,11.7032263160997,10.6155140299813,21.2193942927595,0.684802919724823,0.262261207256992,2.6648780945253,2.42970320867791,0.699561878128147,3.94327706697797,4.2505474417779,4.66828616977833,50.6858009300376,43.7873094795904,25.8587791247546,3.99981056983517,3.21172993494038,1.72269589234506,2.15380998079537,2.15471232685889,1.14014051673824,1.26015064879965,3.54768817048488,1.27006134691926,0.61506478758457,0,4.04392267651784,3.32469290716985,2.24586291888606,0,0,0,0,0,0.485510353031154,62.3189248979108,65.5908744990259,84.7985994986969,97.0165266991569,183.141131359575,92.4878829312126,89.8266133723189,71.3930750289349,87.6890642626327,4.19456515144341,4.35217285206807,9.74672017513146,23.4106086792712,19.4842739158355,22.17389996793,297.405197463609,207.364463874637,245.926584560398,94.1987799152187,69.3649940966689,40.495487277663,35.5991890524111,37.6554460921433,194.140871615926,302.379806288063,356.173818279621,325.499317317706,308.757043263829,205.097406801931,170.952250696549,285.648543769273,330.379338599861,300.584543221477,135.442533629248,183.486704828415,152.377680990194,328.133083872722,300.811372164723,252.122071349472,135.682937514671,128.309875087223,152.645449529033,180.901951480832,188.357733697213,229.64411725677,22.1877746466229,46.3253663454595,17.3918693221007,12.0459342777394,0.679971333707751,1.61910957491345,1.29955283489534,0.896053774194671,15.0275529540974,6.81721290312231,4.1565760736459,4.94675404314476,43.2389298714409,19.2489716121477,15.2883143823987,14.2213340630666,60.61749148314,68.6605235437517,67.740275631981,6.96521666286266,5.43769555659061,80.7525236512647,59.1584964272523,43.5385633986362,46.8149459429799,46.2718506496551,63.733079267552,46.7479719746393,1.97755974187499,16.6289260457898,13.2691582792481,44.0005831856953,25.3967746229453,34.4261429726008,13.0474232852686,106.864990909215,108.4933941293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| ||
|EntrezGene=19280 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000143018_5end | |||
|description=CAGE_peak_1_at_Ptprs_5end | |||
|id=chr17:56615789..56615883,- | |||
|ontology_enrichment_celltype=CL:0002319!1.87e-19!43;CL:0000221!3.83e-19!44;CL:0000133!3.83e-19!44;CL:0000540!2.90e-17!33;CL:0000047!2.90e-17!33;CL:0000031!2.90e-17!33;CL:0000404!2.90e-17!33;CL:0000055!3.22e-17!50;CL:0000393!1.58e-15!39;CL:0000211!1.58e-15!39;CL:0000117!2.43e-14!23;CL:0000337!2.43e-14!23;CL:0002321!8.34e-07!70;CL:0000220!8.34e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.87e-19,43;CL:0000221,3.82e-19,44;CL:0000133,3.82e-19,44;CL:0000540,2.89e-17,33;CL:0000047,2.89e-17,33;CL:0000031,2.89e-17,33;CL:0000404,2.89e-17,33;CL:0000393,1.57e-15,39;CL:0000211,1.57e-15,39;CL:0000117,2.42e-14,23;CL:0000337,2.42e-14,23;CL:0002321,8.78e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.49e-37!73;UBERON:0005743!1.49e-37!73;UBERON:0000073!1.27e-36!75;UBERON:0001016!1.27e-36!75;UBERON:0004121!2.65e-33!102;UBERON:0000924!2.65e-33!102;UBERON:0006601!2.65e-33!102;UBERON:0002346!1.36e-30!71;UBERON:0003075!1.36e-30!71;UBERON:0007284!1.36e-30!71;UBERON:0001049!2.85e-27!52;UBERON:0005068!2.85e-27!52;UBERON:0006241!2.85e-27!52;UBERON:0007135!2.85e-27!52;UBERON:0000033!3.69e-26!63;UBERON:0000955!7.93e-26!50;UBERON:0006238!7.93e-26!50;UBERON:0002616!2.60e-25!49;UBERON:0003056!1.30e-23!49;UBERON:0003080!2.85e-21!40;UBERON:0002780!7.95e-21!39;UBERON:0001890!7.95e-21!39;UBERON:0006240!7.95e-21!39;UBERON:0002020!1.53e-20!34;UBERON:0002791!1.02e-17!29;UBERON:0003528!1.02e-17!29;UBERON:0001893!1.02e-17!29;UBERON:0000153!6.54e-15!94;UBERON:0007811!2.30e-14!86;UBERON:0000956!2.48e-13!21;UBERON:0001869!2.48e-13!21;UBERON:0000203!2.48e-13!21;UBERON:0002619!1.27e-10!17;UBERON:0000025!8.83e-08!114;UBERON:0004111!6.32e-07!122;UBERON:0002021!6.41e-07!10;UBERON:0000411!6.41e-07!10;UBERON:0001950!6.41e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.48e-37,73;UBERON:0001016,1.26e-36,75;UBERON:0004121,3.14e-33,95;UBERON:0000924,3.14e-33,95;UBERON:0006601,3.14e-33,95;UBERON:0002346,2.92e-31,64;UBERON:0003075,2.92e-31,64;UBERON:0007284,2.92e-31,64;UBERON:0000073,2.13e-28,54;UBERON:0001049,2.83e-27,52;UBERON:0005068,2.83e-27,52;UBERON:0006241,2.83e-27,52;UBERON:0007135,2.83e-27,52;UBERON:0010371,5.60e-27,73;UBERON:0000955,2.69e-24,47;UBERON:0006238,2.69e-24,47;UBERON:0002616,8.66e-24,46;UBERON:0003056,1.29e-23,49;UBERON:0010314,7.80e-23,92;UBERON:0003080,2.84e-21,40;UBERON:0002780,7.91e-21,39;UBERON:0001890,7.91e-21,39;UBERON:0006240,7.91e-21,39;UBERON:0002020,1.53e-20,34;UBERON:0003528,1.01e-17,29;UBERON:0002791,1.01e-17,29;UBERON:0001893,1.01e-17,29;UBERON:0000956,2.48e-13,21;UBERON:0001869,2.48e-13,21;UBERON:0000203,2.48e-13,21;UBERON:0002619,1.26e-10,17;UBERON:0000025,9.78e-08,114;UBERON:0002021,6.41e-07,10;UBERON:0000411,6.41e-07,10;UBERON:0001950,6.41e-07,10;UBERON:0004111,6.94e-07,122 | |||
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| |||
|short_description=p1@Ptprs | |||
}} |
Revision as of 14:59, 13 September 2013
Short description: | p1@Ptprs |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ptprs_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000143018_5end |
EntrezGene: | Ptprs |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.87e-19 | 43 |
ectodermal cell | 3.82e-19 | 44 |
neurectodermal cell | 3.82e-19 | 44 |
neuron | 2.89e-17 | 33 |
neuronal stem cell | 2.89e-17 | 33 |
neuroblast | 2.89e-17 | 33 |
electrically signaling cell | 2.89e-17 | 33 |
electrically responsive cell | 1.57e-15 | 39 |
electrically active cell | 1.57e-15 | 39 |
CNS neuron (sensu Vertebrata) | 2.42e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.42e-14 | 23 |
embryonic cell | 8.78e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.