FFCP PHASE1:Mm9::chr17:56175969..56176070,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20405|HGNC=|MCL_coexpression_id=52|UniProt=Q62419,Q3TRJ7|association_with_transcript=0bp_to_ENSMUST00000003268,NM_001252471,NM_013664,uc008daq.1,uc012avp.1_5end|description=CAGE_peak_1_at_Sh3gl1_5end|id=chr17:56175969..56176070,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=51.2476310735341,107.833400960563,82.354862329506,77.7333023058553,72.128985112274,46.1667997757697,38.3124730576662,46.7426430858506,43.3629264227134,50.3238731592286,34.7572475497775,28.2393442843491,48.9634087603248,59.3584532424992,25.3163418979904,26.3217847606774,26.5833513688696,32.6503341145776,30.439404260474,30.5560549294582,36.6536580551111,27.3050115802435,26.3811787030325,28.9586285256066,34.8702107222098,60.2943562320771,37.4762936658395,45.8953725620944,34.3942389216037,28.7314347926321,29.2684274065002,25.4012269383852,27.0628506537211,15.8481681015439,25.9966457776147,27.0962471934343,24.2961533952219,36.412251874111,39.8481025707138,26.1761871986899,55.8819913629464,47.1301384621327,53.4061388334269,49.9810367363042,50.5870886785378,51.2095438531092,122.835441062642,58.6487670663401,45.9144121915046,42.5801478972681,62.153971201661,77.6263847570847,36.2410429084711,21.035502118329,28.231879127967,74.8624958864606,72.7794937444442,69.6157324574547,29.9428362072205,39.1453324661304,32.9592329823213,83.3557548890065,51.5790981744461,84.5905734244515,80.0981753679249,103.019616667185,71.3048263033803,107.581125490035,34.5286408987231,35.9115795962297,33.2313438935184,35.7063730504754,40.6398115350969,29.0303194139441,36.7088153999845,36.7687514644008,11.0115880999389,18.2592893461818,19.2008166570304,30.597618753405,38.1503473822048,27.6084086395083,22.0554569211091,16.8828783009504,21.3917546887534,27.9897156199984,31.6065131374009,32.8063024652529,50.0550137932347,35.7453479305096,43.4796733052517,40.4399222181252,54.39770669662,22.6675340487883,11.695975514058,13.8888335000174,20.6453297593675,57.7758793539616,71.4411512657889,61.4810859647992,47.7459193042947,96.2448580607384,349.083178398105,348.422684545132,18.185247444942,24.3225470856095,22.7486000256652,23.4076953424073,18.9024655062435,20.9303416081403,40.0751104829774,36.2313919191448,37.3597105554815,32.5560903593665,28.2212897125692,30.1599819191221,75.6416601267184,14.0261376212314,25.6537060065464,42.8682152360634,27.1635067706284,36.3656439851417,14.9113408974498,33.6697916563279,44.4027018444525,26.8229907969021,33.7878651106695,26.3957201637099,28.9720117726587,17.2259235315546,11.8950156732843,25.7591421831372,17.5562563394199,28.640131220997,17.0386196538839,22.5515355664183,50.0031276505053,36.8244633005875,22.9977710174644,17.0457903268044,28.2361361229067,44.8309103645272,30.0703756774933,33.1550599238573,30.3442786214922,30.6191791480791,36.9184794765332,22.5071932542944,39.2333747137773,34.9846248310466,40.6447096818722,50.6342141907698,39.4827093900349,61.9888856409456,48.5645841922747,40.0058876305171,30.8973802417823,28.050921875504,23.5855704498342,28.3762308373638,24.8597623579962,26.6491850962302,27.4623893278844,26.9566997493943,27.3052789810659,21.3931229170375,26.0225199357631,22.5357110768637,26.3295759861569,21.1776028662033,20.6725464341932,21.4913981515238,18.6617597997393,19.5941371390143,21.8701546506692,28.1958637919239,59.8057997200674,37.0230793328962,31.1400845781442,31.8164240448801,33.3766724824222,26.0171746764112,34.6909748397998,36.1428689613862,48.4019642775402,32.7750919900782,48.0050248808515,43.3725109049709,51.2755549123286,33.2563181202062,32.4207074812041,32.2608862672075,48.5549826439889,40.9009675142829,30.4310886317317,32.9915151109409,31.4203029211554,33.8054651871335,33.5786012129806,24.6508947125936,18.2118524295995,18.3861774243483,23.7162101669719,20.3551028973635,20.0490175015467,20.2375901146368,22.9231937169008,22.9118301764796,32.0828573244589,23.8787794084173,22.698931748505,32.1236853430055,28.7536413054709,29.3991348658118,32.1398803307997,30.3094653536534,24.2186508254581,20.7450714186248,21.8008764396594,42.4460762365886,38.1338044874341,37.004428698991,37.0810592295833,33.1662389734795,32.3739351604979,41.1731996979955,30.8964882448134,36.7631384816966,39.8636921643718,33.4281162020105,31.2559817177271,29.9423551263729,30.1582567878545,27.1952841909355,25.5717421969899,23.4546234359023,14.6101036888891,20.0431984072667,39.3443868904021,22.9748543755979,35.3369205746207,32.0159770323244,35.7602840236446,32.9776941174522,30.9690156974528,33.1199541022934,40.8858808691643,34.7784470914461,28.4607200121497,15.1021018718249,24.5556347410305,54.3100091185128,45.1196877409406,24.2506080769627,19.9117707509944,37.1454373317122,35.3718561648759,30.1768127609437,45.1811896107582,36.2773474573834,52.9778000994853,41.8063788899131,44.5621722980902,31.6036757935816,30.5713964867496,17.5330423521918,29.2778060948258,32.7711191136985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| ||
|EntrezGene=20405 | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|UniProt=Q62419,Q3TRJ7 | |||
|association_with_transcript=0bp_to_ENSMUST00000003268,NM_001252471,NM_013664,uc008daq.1,uc012avp.1_5end | |||
|description=CAGE_peak_1_at_Sh3gl1_5end | |||
|id=chr17:56175969..56176070,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=51.2476310735341,107.833400960563,82.354862329506,77.7333023058553,72.128985112274,46.1667997757697,38.3124730576662,46.7426430858506,43.3629264227134,50.3238731592286,34.7572475497775,28.2393442843491,48.9634087603248,59.3584532424992,25.3163418979904,26.3217847606774,26.5833513688696,32.6503341145776,30.439404260474,30.5560549294582,36.6536580551111,27.3050115802435,26.3811787030325,28.9586285256066,34.8702107222098,60.2943562320771,37.4762936658395,45.8953725620944,34.3942389216037,28.7314347926321,29.2684274065002,25.4012269383852,27.0628506537211,15.8481681015439,25.9966457776147,27.0962471934343,24.2961533952219,36.412251874111,39.8481025707138,26.1761871986899,55.8819913629464,47.1301384621327,53.4061388334269,49.9810367363042,50.5870886785378,51.2095438531092,122.835441062642,58.6487670663401,45.9144121915046,42.5801478972681,62.153971201661,77.6263847570847,36.2410429084711,21.035502118329,28.231879127967,74.8624958864606,72.7794937444442,69.6157324574547,29.9428362072205,39.1453324661304,32.9592329823213,83.3557548890065,51.5790981744461,84.5905734244515,80.0981753679249,103.019616667185,71.3048263033803,107.581125490035,34.5286408987231,35.9115795962297,33.2313438935184,35.7063730504754,40.6398115350969,29.0303194139441,36.7088153999845,36.7687514644008,11.0115880999389,18.2592893461818,19.2008166570304,30.597618753405,38.1503473822048,27.6084086395083,22.0554569211091,16.8828783009504,21.3917546887534,27.9897156199984,31.6065131374009,32.8063024652529,50.0550137932347,35.7453479305096,43.4796733052517,40.4399222181252,54.39770669662,22.6675340487883,11.695975514058,13.8888335000174,20.6453297593675,57.7758793539616,71.4411512657889,61.4810859647992,47.7459193042947,96.2448580607384,349.083178398105,348.422684545132,18.185247444942,24.3225470856095,22.7486000256652,23.4076953424073,18.9024655062435,20.9303416081403,40.0751104829774,36.2313919191448,37.3597105554815,32.5560903593665,28.2212897125692,30.1599819191221,75.6416601267184,14.0261376212314,25.6537060065464,42.8682152360634,27.1635067706284,36.3656439851417,14.9113408974498,33.6697916563279,44.4027018444525,26.8229907969021,33.7878651106695,26.3957201637099,28.9720117726587,17.2259235315546,11.8950156732843,25.7591421831372,17.5562563394199,28.640131220997,17.0386196538839,22.5515355664183,50.0031276505053,36.8244633005875,22.9977710174644,17.0457903268044,28.2361361229067,44.8309103645272,30.0703756774933,33.1550599238573,30.3442786214922,30.6191791480791,36.9184794765332,22.5071932542944,39.2333747137773,34.9846248310466,40.6447096818722,50.6342141907698,39.4827093900349,61.9888856409456,48.5645841922747,40.0058876305171,30.8973802417823,28.050921875504,23.5855704498342,28.3762308373638,24.8597623579962,26.6491850962302,27.4623893278844,26.9566997493943,27.3052789810659,21.3931229170375,26.0225199357631,22.5357110768637,26.3295759861569,21.1776028662033,20.6725464341932,21.4913981515238,18.6617597997393,19.5941371390143,21.8701546506692,28.1958637919239,59.8057997200674,37.0230793328962,31.1400845781442,31.8164240448801,33.3766724824222,26.0171746764112,34.6909748397998,36.1428689613862,48.4019642775402,32.7750919900782,48.0050248808515,43.3725109049709,51.2755549123286,33.2563181202062,32.4207074812041,32.2608862672075,48.5549826439889,40.9009675142829,30.4310886317317,32.9915151109409,31.4203029211554,33.8054651871335,33.5786012129806,24.6508947125936,18.2118524295995,18.3861774243483,23.7162101669719,20.3551028973635,20.0490175015467,20.2375901146368,22.9231937169008,22.9118301764796,32.0828573244589,23.8787794084173,22.698931748505,32.1236853430055,28.7536413054709,29.3991348658118,32.1398803307997,30.3094653536534,24.2186508254581,20.7450714186248,21.8008764396594,42.4460762365886,38.1338044874341,37.004428698991,37.0810592295833,33.1662389734795,32.3739351604979,41.1731996979955,30.8964882448134,36.7631384816966,39.8636921643718,33.4281162020105,31.2559817177271,29.9423551263729,30.1582567878545,27.1952841909355,25.5717421969899,23.4546234359023,14.6101036888891,20.0431984072667,39.3443868904021,22.9748543755979,35.3369205746207,32.0159770323244,35.7602840236446,32.9776941174522,30.9690156974528,33.1199541022934,40.8858808691643,34.7784470914461,28.4607200121497,15.1021018718249,24.5556347410305,54.3100091185128,45.1196877409406,24.2506080769627,19.9117707509944,37.1454373317122,35.3718561648759,30.1768127609437,45.1811896107582,36.2773474573834,52.9778000994853,41.8063788899131,44.5621722980902,31.6036757935816,30.5713964867496,17.5330423521918,29.2778060948258,32.7711191136985,43.4645177510055,42.4387329362553,34.4040053266011,41.0248280484762,43.2763924183578,49.6277867056797,33.3233825450469,66.0916061095119,21.6117830093863,42.2108807530189,34.8763161663156,40.22872092708,50.1363844813173,44.6463247306567,40.2243554549194,15.7611506708933,21.7006018613273,42.1029210644974,24.6308721401717,24.4878994106098,21.460993752201,25.1655990527175,36.7153408786727,41.1457269831554,38.8341926390431,18.1387417422872,34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| |||
|short_description=p1@Sh3gl1 | |||
}} | |||
Revision as of 14:57, 13 September 2013
| Short description: | p1@Sh3gl1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Sh3gl1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:52 |
| Association with transcript: | 0bp_to_ENSMUST00000003268, NM_001252471, NM_013664, uc008daq.1, uc012avp.1_5end |
| EntrezGene: | Sh3gl1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
