FFCP PHASE1:Hg19::chr5:172755232..172755247,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8614 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11374 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-176bp_to_ENST00000520648_5end | |||
|coexpression_cluster_id=C2818 | |||
|description=CAGE_peak_4_at_STC2_5end | |||
|id=chr5:172755232..172755247,- | |||
|ontology_enrichment_celltype=CL:0000055!1.59e-29!180;CL:0000057!2.26e-20!75;CL:0000222!8.01e-18!119;CL:0000680!1.19e-15!57;CL:0000056!1.19e-15!57;CL:0000355!1.19e-15!57;CL:0000548!6.79e-15!679;CL:0000004!6.79e-15!679;CL:0000255!6.79e-15!679;CL:0000192!8.03e-15!42;CL:0000514!8.03e-15!42;CL:0000359!2.04e-14!32;CL:0000012!3.07e-14!682;CL:0000187!6.93e-14!54;CL:0000183!1.44e-12!59;CL:0000220!2.00e-12!246;CL:0002321!2.15e-12!248;CL:0000144!2.92e-12!625;CL:0000393!2.43e-11!60;CL:0000211!2.43e-11!60;CL:0002371!2.13e-10!591;CL:0000003!4.70e-07!722;CL:0002494!5.58e-07!16;CL:0002334!5.89e-07!12;CL:0000076!8.77e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.09e-16;32!CL:0000192;6.70e-13;43!CL:0002334;1.42e-09;12!CL:0000057;6.53e-09;73!CL:0002494;4.18e-08;16!CL:0000134;7.01e-08;55!CL:0000048;3.04e-07;58!CL:0002320;6.42e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.30e-23,76;CL:0000192,1.34e-17,43;CL:0000514,1.34e-17,43;CL:0000359,8.21e-17,32;CL:0000222,2.53e-16,121;CL:0000680,5.50e-16,58;CL:0000056,5.50e-16,58;CL:0000355,5.50e-16,58;CL:0000048,7.57e-15,427;CL:0000723,1.63e-14,433;CL:0000187,1.02e-13,55;CL:0000034,1.90e-13,441;CL:0000393,3.45e-11,61;CL:0000211,3.45e-11,61;CL:0002334,1.99e-09,12;CL:0002494,5.72e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000514;6.70e-13;43!CL:0000355;2.10e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.18e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.78e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!5.47e-20!84;UBERON:0001637!9.55e-19!42;UBERON:0003509!9.55e-19!42;UBERON:0004572!9.55e-19!42;UBERON:0002049!2.56e-18!79;UBERON:0007798!2.56e-18!79;UBERON:0001981!1.15e-17!60;UBERON:0007500!1.15e-17!60;UBERON:0004537!1.15e-17!60;UBERON:0006965!1.15e-17!60;UBERON:0000055!1.21e-16!69;UBERON:0004535!1.35e-15!110;UBERON:0001009!8.46e-15!113;UBERON:0000490!2.54e-14!138;UBERON:0002100!2.59e-14!216;UBERON:0004573!6.75e-14!33;UBERON:0004571!6.75e-14!33;UBERON:0000914!9.18e-14!83;UBERON:0002329!9.18e-14!83;UBERON:0003077!9.18e-14!83;UBERON:0003059!9.18e-14!83;UBERON:0007282!9.18e-14!83;UBERON:0009618!9.18e-14!83;UBERON:0007285!9.18e-14!83;UBERON:0001134!1.80e-13!61;UBERON:0002036!1.80e-13!61;UBERON:0003082!1.80e-13!61;UBERON:0003914!2.78e-13!118;UBERON:0004290!5.18e-13!70;UBERON:0002385!8.83e-13!63;UBERON:0001015!8.83e-13!63;UBERON:0000383!8.83e-13!63;UBERON:0000486!1.02e-12!82;UBERON:0005256!1.18e-11!143;UBERON:0003102!3.45e-10!95;UBERON:0000475!2.76e-08!365;UBERON:0000947!4.46e-08!21;UBERON:0010191!4.46e-08!21;UBERON:0003104!9.11e-08!238;UBERON:0009142!9.11e-08!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.20e-17;42!UBERON:0003509;2.20e-17;42!UBERON:0004572;2.20e-17;42!UBERON:0004573;1.86e-14;33!UBERON:0004571;1.86e-14;33!UBERON:0007500;3.90e-11;56!UBERON:0001981;3.90e-11;56!UBERON:0004537;3.90e-11;56!UBERON:0000947;2.81e-09;21!UBERON:0010191;2.81e-09;21!UBERON:0000055;7.68e-09;65!UBERON:0002049;3.42e-08;75!UBERON:0007798;3.42e-08;75!UBERON:0003914;2.26e-07;74!UBERON:0002384;2.70e-07;198!UBERON:0003688;3.15e-07;6!UBERON:0002358;3.15e-07;6!UBERON:0003684;3.15e-07;6!UBERON:0001178;3.15e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,9.84e-23,42;UBERON:0003509,9.84e-23,42;UBERON:0004572,9.84e-23,42;UBERON:0004872,3.24e-20,83;UBERON:0007500,2.50e-18,59;UBERON:0001981,2.50e-18,59;UBERON:0004537,2.50e-18,59;UBERON:0006965,2.50e-18,59;UBERON:0000055,1.44e-16,68;UBERON:0002049,1.86e-16,78;UBERON:0007798,1.86e-16,78;UBERON:0004573,6.82e-16,33;UBERON:0004571,6.82e-16,33;UBERON:0004535,8.46e-15,109;UBERON:0001134,4.51e-14,62;UBERON:0002036,4.51e-14,62;UBERON:0003082,4.51e-14,62;UBERON:0001009,6.76e-14,112;UBERON:0002385,3.24e-13,64;UBERON:0001015,3.24e-13,64;UBERON:0000383,3.24e-13,64;UBERON:0007524,3.10e-12,73;UBERON:0002329,3.35e-12,71;UBERON:0003059,3.35e-12,71;UBERON:0007282,3.35e-12,71;UBERON:0004290,3.35e-12,71;UBERON:0009618,3.35e-12,71;UBERON:0003077,7.57e-12,72;UBERON:0007285,7.57e-12,72;UBERON:0003914,8.82e-12,117;UBERON:0000490,1.46e-11,148;UBERON:0000486,1.39e-10,83;UBERON:0007503,1.75e-10,78;UBERON:0002100,1.01e-09,199;UBERON:0000947,2.02e-09,21;UBERON:0010191,2.02e-09,21;UBERON:0005256,1.43e-08,122;UBERON:0000926,1.43e-07,315;UBERON:0004120,1.43e-07,315;UBERON:0006603,1.43e-07,315;UBERON:0003688,3.78e-07,6;UBERON:0002358,3.78e-07,6;UBERON:0003684,3.78e-07,6;UBERON:0001178,3.78e-07,6 | |||
|phase1_expression=3.45188920614058,5.56661362116556,5.21531295155093,6.00439790118782,5.36353313312745,0,2.53299878168311,0.631719873426831,0,0.737201809504527,0,0,0.263766978228454,0.247532705920093,0,0.672325146451775,4.21886169616784,2.19093027116212,1.95173119516203,0.123121058076788,0.408001382488506,0.626909442956176,0.286235987131057,0,0,0,0,0.0787107813136792,0,0,0,0,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.53435074212236,2.1686349143074,5.0133791063589,4.92478164466801,2.3858578411533,1.94653948121054,0.283604451492204,0.443458794925128,0.43917392846563,0.392937226493138,0.364295288292542,0.741568885568859,0,0,0,0,0,0,1.78886166630035,3.4409383804245,1.04142150482278,0.56530794192401,2.09749718104953,3.02629846134074,2.29894463190492,0,0,0.33472061276467,0,1.52054421143703,1.22031028774085,2.57364156242108,3.24056779152704,0.714397826272638,0.22452937262617,0,1.53316637465883,0.949265659568129,1.46561395144326,0,0,0,3.97577561356255,4.81195944325403,8.87141511448566,3.15520282823695,2.83734705758686,7.28880880184999,4.2699598291882,11.8400423240237,1.55605517699883,2.2900814251847,0.980771418680752,0.605429710579726,1.15235184896,1.64025002283658,0.312160076830321,0,1.19558944441441,0.587172493218824,0.323745888736263,0.280901613404497,0.408308342509787,1.10550885580591,1.13658359293342,3.56400857184616,4.94533858557114,0.910161361938026,5.03032699271367,0.505008341862199,0.250237039743928,0.831192346452549,2.63386572528503,7.35570709917647,3.90618953157152,3.62982986112067,3.58779271377724,4.69826255400848,1.90738711043606,4.20127534518163,2.06105058476878,4.12224864073007,2.23340227597908,4.89451363499672,4.77441325289873,3.78650661366172,2.85354685791128,2.58633690910099,2.13005755509969,1.91428986632517,1.52604533079439,0.193260853163297,0.272746120590835,0.573609190778008,0.243947412259191,0.132529768321485,0,0.414644220061482,0.252320850875628,0,4.69348596989448,0.643240938192885,0,1.85747171212792,1.44375896333917,0.118306800039844,0,0,0.220587945464788,0,0.237270619111097,0.269662616320329,0,0.38474715694639,0.738155454624648,1.40241773803446,0.8231480226628,0,0,0,0,0,0.122988438543114,1.3725424823882,0.219500570817251,2.24803506515239,0.703702806881416,0.462942225792648,1.3032332212413,0,0,0,1.52631302506568,1.15493158208859,0.462985512576611,1.14152491340759,1.58040879591855,1.71697232418975,0,0,0,0.93733833986777,0.503946384596579,0.141775097242386,1.34337784054272,2.03443756959773,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.672786506072164,1.74384027533312,1.10007428731425,1.03417372606222,0,0,3.45719551560332,2.08014873822732,0.514414748524284,2.83698264046557,2.93064396917709,1.71573592389777,0,1.64648067356154,0,3.909311436168,0.791951872933429,1.50719688529793,3.48613383440118,2.29937879718731,0,0,0,16.7737398844108,8.04033550838797,0,9.41078493339265,5.13690806375959,5.37182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,1.62759014219841,1.03985430765404,1.60586089917446,0.946214490203608,0.468565659970853,1.80567659836631,0,2.0694614258501,4.64957918974806,2.21243002250044,4.34418072340414,0.391602314925481,0.343143423810856,0,0,0,0.303127571446259,0,0.30239029332968,1.24053903909388,5.21770709179412,5.61320188866147,3.33161788064823,5.11707249066703,6.91671860917512,2.96836132889982,1.54209693802656,2.84098760501003,1.06765302817952,2.07701771673448,3.37010097533882,0.362578348774867,1.00253235151642,0.644566922551274,7.00368133804101,4.55227920016793,2.62248829918848,0.451199612907412,0.385076685522074,0,0,0.105551628892876,0,0.510281115829547,1.0795795805107,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0,0.650756789328606,0.103041011647722,1.55668090191184,0.742585499285292,0.574265537996172,1.95018073810956,4.82051789532479,1.7400729292582,0.154048617114644,0.614014698904518,0.689182862422653,0.751941714077915,0.145016693914229,0.255679882248303,1.78064071293475,2.97512847649761,1.15314040419064,0.510450849978337,0.50578890427775,0,23.9257383591286,1.3940745403212,2.7723022215848,5.32306030317022,2.60979897622522,4.26245703939016,11.8793655995853,1.48863347743867,3.48017367190598,0.762520775695299,1.27948895655667,2.56763392820352,0.95460974377781,3.92474320099615,1.07923474549989,0.54907405947211,0.589062011728432,4.44801459461295,6.34041284692033,2.10629228119491,2.92580243453754,4.38684281336312,4.22600587027022,1.63799893689583,9.19135307699133,3.39024349860728,0.551365343546124,5.30751180192976,7.45366504931397,0,0,7.91350470154546,5.5768229657955,2.81695602532241,1.14729081763241,1.67023369722306,10.3434604929563,2.48332744849418,5.9110137883346,0.658589785919804,0,2.0996083214699,0.769776901804097,1.34060455107157,3.26672954583968,0.0941438007767792,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032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| |||
|short_description=p4@STC2 | |||
}} |
Revision as of 14:55, 13 September 2013
Short description: | p4@STC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_STC2_5end |
Coexpression cluster: | C2818_Smooth_Multipotent_hepatic_Preadipocyte_mesothelioma_Fibroblast_mesenchymal |
Association with transcript: | -176bp_to_ENST00000520648_5end |
EntrezGene: | STC2 |
HGNC: | 11374 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.30e-23 | 76 |
smooth muscle cell | 1.34e-17 | 43 |
smooth muscle myoblast | 1.34e-17 | 43 |
vascular associated smooth muscle cell | 8.21e-17 | 32 |
mesodermal cell | 2.53e-16 | 121 |
muscle precursor cell | 5.50e-16 | 58 |
myoblast | 5.50e-16 | 58 |
multi-potent skeletal muscle stem cell | 5.50e-16 | 58 |
multi fate stem cell | 7.57e-15 | 427 |
somatic stem cell | 1.63e-14 | 433 |
muscle cell | 1.02e-13 | 55 |
stem cell | 1.90e-13 | 441 |
electrically responsive cell | 3.45e-11 | 61 |
electrically active cell | 3.45e-11 | 61 |
preadipocyte | 1.99e-09 | 12 |
cardiocyte | 5.72e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.78e-07 | 14 |
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