FFCP PHASE1:Mm9::chr17:36116509..36116536,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=14670|HGNC=|MCL_coexpression_id=0|UniProt=P36916|association_with_transcript=-259bp_to_ENSMUST00000087200_5end|description=CAGE_peak_8_at_Gnl1_5end|id=chr17:36116509..36116536,+|ontology_enrichment_celltype=CL:0000221!3.59e-07!44;CL:0000133!3.59e-07!44;CL:0002319!5.39e-07!43|ontology_enrichment_celltype_v019_2=CL:0002453,3.35e-19,8;CL:0000333,2.85e-15,10;CL:0000095,2.85e-15,10;CL:0000243,2.85e-15,10;CL:0000123,2.85e-15,10;CL:0000125,2.85e-15,10;CL:0000030,2.85e-15,10;CL:0000339,2.85e-15,10;CL:0000128,1.23e-11,6;CL:0000126,1.23e-11,6;CL:0000127,1.23e-11,6;CL:0000878,4.99e-10,2;CL:0000129,4.99e-10,2;CL:0002605,1.35e-09,2;CL:0002604,1.35e-09,2;CL:0002319,9.12e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.37e-18!73;UBERON:0005743!2.37e-18!73;UBERON:0000073!3.19e-18!75;UBERON:0001016!3.19e-18!75;UBERON:0000955!3.19e-17!50;UBERON:0006238!3.19e-17!50;UBERON:0000033!6.21e-17!63;UBERON:0002616!1.10e-16!49;UBERON:0001049!6.13e-15!52;UBERON:0005068!6.13e-15!52;UBERON:0006241!6.13e-15!52;UBERON:0007135!6.13e-15!52;UBERON:0004121!7.31e-15!102;UBERON:0000924!7.31e-15!102;UBERON:0006601!7.31e-15!102;UBERON:0003080!1.13e-13!40;UBERON:0003056!4.06e-13!49;UBERON:0002780!4.28e-13!39;UBERON:0001890!4.28e-13!39;UBERON:0006240!4.28e-13!39;UBERON:0002346!2.03e-12!71;UBERON:0003075!2.03e-12!71;UBERON:0007284!2.03e-12!71;UBERON:0007811!4.85e-11!86;UBERON:0002020!1.75e-09!34;UBERON:0002791!2.24e-09!29;UBERON:0003528!2.24e-09!29;UBERON:0001893!2.24e-09!29;UBERON:0000153!1.23e-08!94;UBERON:0002619!4.25e-07!17|ontology_enrichment_uberon_v019_2=|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0.129123323441576,0,0.468129052643987,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,9.26971862646661,0.595745707205312,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,1.5378032791413,1.74986909166855,1.25987779462826,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,1.90149421051854,0.338844532069132,0,0,0,0.7104801149461,2.69640099466564,9.60545763303886,0,0.270011876663381,0,0,1.32521124570968,0.489963196859816,0.0958454710182364,0.919218786610021,1.10115880999389,0.766124028511126,0.921639199537461,0.395658863190582,0.914876436024097,0.52091337055676,0.279182999001381,0.56276261003168,0.45839474333043,0,0.711858403995515,0.372798891650601,0.151452386666368,0.151143120213571,0,0,0,0,0,0,1.54488862144927,0,0,0,0.281686839553361,0,0,0,0,0,0,1.25602267690966,0,0.148442139064825,0,0,0,0.150722640552623,0,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0.127070227073065,0.748953197024114,0.457500602818626,0.628271760564322,0.695297280769106,0,0.41557608911912,0.162241263067758,0.203678727700633,0.248813941220186,0.252722758433675,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.204109497453984,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0.702213187313235,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,0.841159794256509,0.514523061896422,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.494096864172033,0,0.397912944082302,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0.581857461502877,0.420814919341911,0.316182685621286,0.295220295959204,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0.287696137450811,1.13494658742525,0,1.43768206527355,0,0,0,0.179397413521912,0.482443521363367,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0.963303539926752,0.35163505977661,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,0.642642632843614,0.283880170416537,0.35613120733451,0.325773918707152,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0.720244376125241,0.388076051348264,0.643011105094777,0.709360934569094,0.178368817602071,0.987294123612726,0.608929898229199,0,0.21183207086382,0,0.65954501176592,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0.279902904647316,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0,0,0,0,0,0,64.8246879486819,0,0.496375471371293,0.583353565032143,0.387479470433193,0,0,0.13020438484395,0.314578033277133,16.4277202161684,24.7705805381764,0,0,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0,0.100966449948148,0.15241361331,0.201652370273681,0.194915761479505,0.0962118416403295,0,0.453460767230423,0,0.179427713218951,0.335769232728157,0.19318959403219,0,0.183151624267265,0,0,0.564751842617067,1.38097570952153,1.14579102687879,0,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,0,0.103787347584177,0,0,0,0,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.0640251524048693,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0,0,0.354951612318675,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0.29551344712669,0,0,0.192906610981141,0,0.467863216890817,0.644613162144895,0.191288332068843,0.441182838239031,0|short_description=p8@Gnl1}} | ||
|EntrezGene=14670 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=P36916 | |||
|association_with_transcript=-259bp_to_ENSMUST00000087200_5end | |||
|description=CAGE_peak_8_at_Gnl1_5end | |||
|id=chr17:36116509..36116536,+ | |||
|ontology_enrichment_celltype=CL:0000221!3.59e-07!44;CL:0000133!3.59e-07!44;CL:0002319!5.39e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.35e-19,8;CL:0000333,2.85e-15,10;CL:0000095,2.85e-15,10;CL:0000243,2.85e-15,10;CL:0000123,2.85e-15,10;CL:0000125,2.85e-15,10;CL:0000030,2.85e-15,10;CL:0000339,2.85e-15,10;CL:0000128,1.23e-11,6;CL:0000126,1.23e-11,6;CL:0000127,1.23e-11,6;CL:0000878,4.99e-10,2;CL:0000129,4.99e-10,2;CL:0002605,1.35e-09,2;CL:0002604,1.35e-09,2;CL:0002319,9.12e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.37e-18!73;UBERON:0005743!2.37e-18!73;UBERON:0000073!3.19e-18!75;UBERON:0001016!3.19e-18!75;UBERON:0000955!3.19e-17!50;UBERON:0006238!3.19e-17!50;UBERON:0000033!6.21e-17!63;UBERON:0002616!1.10e-16!49;UBERON:0001049!6.13e-15!52;UBERON:0005068!6.13e-15!52;UBERON:0006241!6.13e-15!52;UBERON:0007135!6.13e-15!52;UBERON:0004121!7.31e-15!102;UBERON:0000924!7.31e-15!102;UBERON:0006601!7.31e-15!102;UBERON:0003080!1.13e-13!40;UBERON:0003056!4.06e-13!49;UBERON:0002780!4.28e-13!39;UBERON:0001890!4.28e-13!39;UBERON:0006240!4.28e-13!39;UBERON:0002346!2.03e-12!71;UBERON:0003075!2.03e-12!71;UBERON:0007284!2.03e-12!71;UBERON:0007811!4.85e-11!86;UBERON:0002020!1.75e-09!34;UBERON:0002791!2.24e-09!29;UBERON:0003528!2.24e-09!29;UBERON:0001893!2.24e-09!29;UBERON:0000153!1.23e-08!94;UBERON:0002619!4.25e-07!17 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0.129123323441576,0,0.468129052643987,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,9.26971862646661,0.595745707205312,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,1.5378032791413,1.74986909166855,1.25987779462826,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,1.90149421051854,0.338844532069132,0,0,0,0.7104801149461,2.69640099466564,9.60545763303886,0,0.270011876663381,0,0,1.32521124570968,0.489963196859816,0.0958454710182364,0.919218786610021,1.10115880999389,0.766124028511126,0.921639199537461,0.395658863190582,0.914876436024097,0.52091337055676,0.279182999001381,0.56276261003168,0.45839474333043,0,0.711858403995515,0.372798891650601,0.151452386666368,0.151143120213571,0,0,0,0,0,0,1.54488862144927,0,0,0,0.281686839553361,0,0,0,0,0,0,1.25602267690966,0,0.148442139064825,0,0,0,0.150722640552623,0,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0.127070227073065,0.748953197024114,0.457500602818626,0.628271760564322,0.695297280769106,0,0.41557608911912,0.162241263067758,0.203678727700633,0.248813941220186,0.252722758433675,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.204109497453984,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0.702213187313235,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,0.841159794256509,0.514523061896422,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.494096864172033,0,0.397912944082302,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0.581857461502877,0.420814919341911,0.316182685621286,0.295220295959204,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0.287696137450811,1.13494658742525,0,1.43768206527355,0,0,0,0.179397413521912,0.482443521363367,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0.963303539926752,0.35163505977661,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,0.642642632843614,0.283880170416537,0.35613120733451,0.325773918707152,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0.720244376125241,0.388076051348264,0.643011105094777,0.709360934569094,0.178368817602071,0.987294123612726,0.608929898229199,0,0.21183207086382,0,0.65954501176592,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0.279902904647316,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0,0,0,0,0,0,64.8246879486819,0,0.496375471371293,0.583353565032143,0.387479470433193,0,0,0.13020438484395,0.314578033277133,16.4277202161684,24.7705805381764,0,0,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0,0.100966449948148,0.15241361331,0.201652370273681,0.194915761479505,0.0962118416403295,0,0.453460767230423,0,0.179427713218951,0.335769232728157,0.19318959403219,0,0.183151624267265,0,0,0.564751842617067,1.38097570952153,1.14579102687879,0,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,0,0.103787347584177,0,0,0,0,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.0640251524048693,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0,0,0.354951612318675,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0.29551344712669,0,0,0.192906610981141,0,0.467863216890817,0.644613162144895,0.191288332068843,0.441182838239031,0 | |||
|short_description=p8@Gnl1 | |||
}} |
Revision as of 14:28, 13 September 2013
Short description: | p8@Gnl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Gnl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -259bp_to_ENSMUST00000087200_5end |
EntrezGene: | Gnl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.35e-19 | 8 |
migratory neural crest cell | 2.85e-15 | 10 |
neuron associated cell | 2.85e-15 | 10 |
glial cell (sensu Vertebrata) | 2.85e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 2.85e-15 | 10 |
glial cell | 2.85e-15 | 10 |
glioblast | 2.85e-15 | 10 |
glioblast (sensu Vertebrata) | 2.85e-15 | 10 |
oligodendrocyte | 1.23e-11 | 6 |
macroglial cell | 1.23e-11 | 6 |
astrocyte | 1.23e-11 | 6 |
central nervous system macrophage | 4.99e-10 | 2 |
microglial cell | 4.99e-10 | 2 |
astrocyte of the cerebral cortex | 1.35e-09 | 2 |
astrocyte of the hippocampus | 1.35e-09 | 2 |
neural cell | 9.12e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.