FFCP PHASE1:Mm9::chr17:36003622..36003644,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76448|HGNC=|UniProt=Q8BQ30|association_with_transcript=17bp_to_ENSMUST00000113814_5end|description=CAGE_peak_6_at_Ppp1r18_5end|id=chr17:36003622..36003644,+|ontology_enrichment_celltype=CL:0000219!3.81e-08!54;CL:0000738!7.03e-07!17;CL:0002087!7.03e-07!17|ontology_enrichment_celltype_v019_2=CL:0000219,2.72e-14,54;CL:0002320,2.24e-10,46;CL:0000134,2.24e-10,46;CL:0000988,4.03e-08,32;CL:0002032,4.03e-08,32;CL:0000037,4.03e-08,32;CL:0000837,4.03e-08,32;CL:0000034,7.19e-08,97;CL:0000738,2.91e-07,17;CL:0002087,2.91e-07,17;CL:0000333,7.83e-07,10;CL:0000095,7.83e-07,10;CL:0000243,7.83e-07,10;CL:0000123,7.83e-07,10;CL:0000125,7.83e-07,10;CL:0000030,7.83e-07,10;CL:0000339,7.83e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!2.45e-09!88|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.24e-10,46;UBERON:0003081,2.66e-08,87|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0.33575854382378,0,3.48632973292256,10.559154161375,19.1932911584035,0.68487187290202,2.31339261086476,2.56801094896809,1.22388563386596,1.66554880907831,0.607425802169478,0,2.83915948822414,2.19383093769182,0.84877930359606,0.255129870453209,0.893618560807968,0.783599367416806,0.319984845586813,0.68822784320151,0.57423196411502,0.86152399231815,0.646413698057667,0,0,0.443461021310609,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,0.971020706062307,1.6366586336825,2.73717714292689,0.917733760808408,8.60630478782843,0.436050312760893,1.97717564461025,2.52758868796568,2.09979632438044,1.43752564364972,2.01339127269284,5.07753499407941,0.672187598284928,2.82985379639542,0.85960031981627,3.09403255366465,0.202316460859598,0,0,2.37191172448392,0,2.2497492932035,8.89979726310277,2.8419204597844,4.19440154725767,1.53687322128622,0.103689612308478,0.540023753326763,0.210324961351382,0.285650984403804,0,0.122490799214954,0.479227355091182,0,0,0.255374676170375,0,0.131886287730194,0.823388792421687,0.52091337055676,0.279182999001381,0,0.30559649555362,0.294628585473668,0.284743361598206,0.186399445825301,2.80186915332781,3.47629176491213,4.05810284182349,0,0,0,0,0,0.561777680527007,2.21559419351475,2.59786004602869,2.47337702157238,0.14084341977668,2.56652954828636,0,0,0.432982082022428,0.760079596425296,0.505524445014783,0.11418387971906,11.6522047641227,1.33597925158342,1.56136794089522,0.913396434936424,0.922461989024234,1.05505848386836,1.05829836422134,0,1.73036477414062,1.15679485535929,0.884610551949874,0.808834249737046,1.54589062922275,0.484875253135222,0,0.585561594023094,0,0.766371165625774,3.83408398418945,1.79970819298022,2.54140454146129,0.149790639404823,0.915001205637253,0,0.521472960576829,0.511430914660661,0,0.162241263067758,0.712875546952214,1.36847667671102,0.252722758433675,0.210441855886474,1.04096354370163,0,0,0.60281927134286,0.816437989815934,0.640568601424249,0.374806898238915,0.258703370739016,1.07783996466421,0.756424320671277,1.75951124163949,1.31517439456545,0.834141747676794,1.39300866608867,0.411564272815887,0.398068533636986,4.21327912387941,1.28673953557358,0,1.44988040774851,1.64168241986767,0.540186184383045,1.89395788468168,0.590292695242212,1.69693824176116,1.86027155800326,1.3413670069981,1.28441876603886,0.987359099480883,1.14917224855367,0.324275238183423,0.438599962275997,0.219550115291051,0.805238512562231,0,0.617427674275707,0.991256348951394,0.793351699990633,1.70630600428187,1.16118335930219,0.902072229254653,0.201683524623343,0.667134131534611,1.14135375667535,0,0.494096864172033,0,0.596869416123452,0.38992817423824,0.898819408654221,0.432276099749388,0.199141273254367,0.379335801906163,0.685491075658373,0,1.22190796707189,0.387904974335251,0.561086559122548,0.379419222745544,0.147610147979602,0,0.740382983530803,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0,1.2731292589071,0.287696137450811,0.648540907100142,0.274561413188081,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0,1.29327233116623,0.189491411770485,1.30371981153621,0.509235257325564,1.17345124144251,1.17254380209271,0.714130922658041,1.17080188714679,1.10344600874334,1.99318220683897,1.11618338060241,0.655453258862952,0.863424909329478,1.01254341007058,1.50791283939272,4.89515115436839,0,0.551873492609465,0,0,0.983609672260053,0,0.94652465824877,0.780877488593277,1.29254038639679,2.86762557543062,3.11918143715352,2.83076530788832,2.83367491172426,1.75353514746787,2.37172666767914,0,0.709700426041343,1.24645922567079,0.488660878060728,0.989820737835213,0,0.728341908464944,0.604647113929502,0.377210159511796,1.47650946440386,0.307435147943927,0.258428293168221,1.09060118843252,1.06949213515416,0.948110273807448,0,0,0,0.36012218806262,0.517434735131018,0.857348140126369,0.886701168211368,0.713475270408282,1.31639216481697,0.608929898229199,2.3467170806371,0.21183207086382,0.220528398054962,0.8244312647074,0.968786560175433,0.784068024066026,0.835606408021955,0.820704498725306,0.582961673259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| ||
|EntrezGene=76448 | |||
|HGNC= | |||
|UniProt=Q8BQ30 | |||
|association_with_transcript=17bp_to_ENSMUST00000113814_5end | |||
|description=CAGE_peak_6_at_Ppp1r18_5end | |||
|id=chr17:36003622..36003644,+ | |||
|ontology_enrichment_celltype=CL:0000219!3.81e-08!54;CL:0000738!7.03e-07!17;CL:0002087!7.03e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.72e-14,54;CL:0002320,2.24e-10,46;CL:0000134,2.24e-10,46;CL:0000988,4.03e-08,32;CL:0002032,4.03e-08,32;CL:0000037,4.03e-08,32;CL:0000837,4.03e-08,32;CL:0000034,7.19e-08,97;CL:0000738,2.91e-07,17;CL:0002087,2.91e-07,17;CL:0000333,7.83e-07,10;CL:0000095,7.83e-07,10;CL:0000243,7.83e-07,10;CL:0000123,7.83e-07,10;CL:0000125,7.83e-07,10;CL:0000030,7.83e-07,10;CL:0000339,7.83e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.45e-09!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.24e-10,46;UBERON:0003081,2.66e-08,87 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0.33575854382378,0,3.48632973292256,10.559154161375,19.1932911584035,0.68487187290202,2.31339261086476,2.56801094896809,1.22388563386596,1.66554880907831,0.607425802169478,0,2.83915948822414,2.19383093769182,0.84877930359606,0.255129870453209,0.893618560807968,0.783599367416806,0.319984845586813,0.68822784320151,0.57423196411502,0.86152399231815,0.646413698057667,0,0,0.443461021310609,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,0.971020706062307,1.6366586336825,2.73717714292689,0.917733760808408,8.60630478782843,0.436050312760893,1.97717564461025,2.52758868796568,2.09979632438044,1.43752564364972,2.01339127269284,5.07753499407941,0.672187598284928,2.82985379639542,0.85960031981627,3.09403255366465,0.202316460859598,0,0,2.37191172448392,0,2.2497492932035,8.89979726310277,2.8419204597844,4.19440154725767,1.53687322128622,0.103689612308478,0.540023753326763,0.210324961351382,0.285650984403804,0,0.122490799214954,0.479227355091182,0,0,0.255374676170375,0,0.131886287730194,0.823388792421687,0.52091337055676,0.279182999001381,0,0.30559649555362,0.294628585473668,0.284743361598206,0.186399445825301,2.80186915332781,3.47629176491213,4.05810284182349,0,0,0,0,0,0.561777680527007,2.21559419351475,2.59786004602869,2.47337702157238,0.14084341977668,2.56652954828636,0,0,0.432982082022428,0.760079596425296,0.505524445014783,0.11418387971906,11.6522047641227,1.33597925158342,1.56136794089522,0.913396434936424,0.922461989024234,1.05505848386836,1.05829836422134,0,1.73036477414062,1.15679485535929,0.884610551949874,0.808834249737046,1.54589062922275,0.484875253135222,0,0.585561594023094,0,0.766371165625774,3.83408398418945,1.79970819298022,2.54140454146129,0.149790639404823,0.915001205637253,0,0.521472960576829,0.511430914660661,0,0.162241263067758,0.712875546952214,1.36847667671102,0.252722758433675,0.210441855886474,1.04096354370163,0,0,0.60281927134286,0.816437989815934,0.640568601424249,0.374806898238915,0.258703370739016,1.07783996466421,0.756424320671277,1.75951124163949,1.31517439456545,0.834141747676794,1.39300866608867,0.411564272815887,0.398068533636986,4.21327912387941,1.28673953557358,0,1.44988040774851,1.64168241986767,0.540186184383045,1.89395788468168,0.590292695242212,1.69693824176116,1.86027155800326,1.3413670069981,1.28441876603886,0.987359099480883,1.14917224855367,0.324275238183423,0.438599962275997,0.219550115291051,0.805238512562231,0,0.617427674275707,0.991256348951394,0.793351699990633,1.70630600428187,1.16118335930219,0.902072229254653,0.201683524623343,0.667134131534611,1.14135375667535,0,0.494096864172033,0,0.596869416123452,0.38992817423824,0.898819408654221,0.432276099749388,0.199141273254367,0.379335801906163,0.685491075658373,0,1.22190796707189,0.387904974335251,0.561086559122548,0.379419222745544,0.147610147979602,0,0.740382983530803,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0,1.2731292589071,0.287696137450811,0.648540907100142,0.274561413188081,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0,1.29327233116623,0.189491411770485,1.30371981153621,0.509235257325564,1.17345124144251,1.17254380209271,0.714130922658041,1.17080188714679,1.10344600874334,1.99318220683897,1.11618338060241,0.655453258862952,0.863424909329478,1.01254341007058,1.50791283939272,4.89515115436839,0,0.551873492609465,0,0,0.983609672260053,0,0.94652465824877,0.780877488593277,1.29254038639679,2.86762557543062,3.11918143715352,2.83076530788832,2.83367491172426,1.75353514746787,2.37172666767914,0,0.709700426041343,1.24645922567079,0.488660878060728,0.989820737835213,0,0.728341908464944,0.604647113929502,0.377210159511796,1.47650946440386,0.307435147943927,0.258428293168221,1.09060118843252,1.06949213515416,0.948110273807448,0,0,0,0.36012218806262,0.517434735131018,0.857348140126369,0.886701168211368,0.713475270408282,1.31639216481697,0.608929898229199,2.3467170806371,0.21183207086382,0.220528398054962,0.8244312647074,0.968786560175433,0.784068024066026,0.835606408021955,0.820704498725306,0.582961673259701,0.370850604021019,1.02522528478712,1.03193433981611,2.22233432843654,1.31857919903284,1.0935538217682,0.686334519619568,5.09935289981566,6.15786390224095,7.60099855924331,0,1.10717597753397,0.609958401380546,0.648032044930808,0.627264888043406,0,0.944050424693745,1.07449492442937,0.523511883968059,0.518459893167171,0,0.56369293868419,0.897099276263873,0.992750942742586,0.583353565032143,1.03327858782185,0.506868376472335,0.704143431874524,0.39061315453185,1.04859344425711,0.241584120826006,0.288030006257865,0.632022241256357,1.01362607645082,0.821687657318618,0.389762468933385,0.895133478337407,0.79472541912506,0.480781798079875,0.590758108698309,0.605798699688886,0.304827226619999,0.403304740547362,1.07203668813728,0.481059208201647,0.701261413089414,0.906921534460845,0.443971906748129,1.43542170575161,2.18250001273302,1.73870634628971,1.12609485270709,0.36630324853453,0.428736758158132,0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| |||
|short_description=p6@Ppp1r18 | |||
}} | |||
Revision as of 14:27, 13 September 2013
| Short description: | p6@Ppp1r18 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Ppp1r18_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 17bp_to_ENSMUST00000113814_5end |
| EntrezGene: | Ppp1r18 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| motile cell | 2.72e-14 | 54 |
| connective tissue cell | 2.24e-10 | 46 |
| mesenchymal cell | 2.24e-10 | 46 |
| hematopoietic cell | 4.03e-08 | 32 |
| hematopoietic oligopotent progenitor cell | 4.03e-08 | 32 |
| hematopoietic stem cell | 4.03e-08 | 32 |
| hematopoietic multipotent progenitor cell | 4.03e-08 | 32 |
| stem cell | 7.19e-08 | 97 |
| leukocyte | 2.91e-07 | 17 |
| nongranular leukocyte | 2.91e-07 | 17 |
| migratory neural crest cell | 7.83e-07 | 10 |
| neuron associated cell | 7.83e-07 | 10 |
| glial cell (sensu Vertebrata) | 7.83e-07 | 10 |
| neuron associated cell (sensu Vertebrata) | 7.83e-07 | 10 |
| glial cell | 7.83e-07 | 10 |
| glioblast | 7.83e-07 | 10 |
| glioblast (sensu Vertebrata) | 7.83e-07 | 10 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 2.24e-10 | 46 |
| lateral plate mesoderm | 2.66e-08 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
