FFCP PHASE1:Hg19::chr5:156536036..156536065,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84868|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18437|TSSclassifier=S|UniProt=|association_with_transcript=37bp_to_ENST00000522902_5end|coexpression_cluster_id=C392|description=CAGE_peak_2_at_HAVCR2_5end|id=chr5:156536036..156536065,-|ontology_enrichment_celltype=CL:0000557!2.67e-41!71;CL:0000839!2.27e-38!70;CL:0000766!5.46e-38!76;CL:0002009!1.02e-37!65;CL:0002194!3.09e-36!63;CL:0000576!3.09e-36!63;CL:0000040!3.09e-36!63;CL:0000559!3.09e-36!63;CL:0000763!3.88e-36!112;CL:0000049!3.88e-36!112;CL:0002057!1.10e-33!42;CL:0000037!5.29e-31!172;CL:0000566!5.29e-31!172;CL:0000738!1.25e-30!140;CL:0000860!5.35e-30!45;CL:0002032!4.97e-29!165;CL:0000837!4.97e-29!165;CL:0002031!3.09e-28!124;CL:0000988!1.74e-27!182;CL:0002087!1.51e-25!119;CL:0002393!7.95e-07!9;CL:0002397!7.95e-07!9|ontology_enrichment_celltype_v019=CL:0000473;1.18e-31;39!CL:0000234;1.18e-31;39!CL:0000860;1.48e-31;33!CL:0002057;1.48e-31;33!CL:0000576;3.02e-26;48!CL:0000766;1.66e-21;69!CL:0000763;3.02e-12;100!CL:0000235;8.17e-08;6!CL:0000738;1.26e-07;136!CL:0002087;6.59e-07;104|ontology_enrichment_celltype_v019_2=CL:0000557,2.53e-54,67;CL:0000766,1.85e-50,72;CL:0002009,6.59e-50,61;CL:0000839,1.22e-49,66;CL:0002194,4.70e-48,59;CL:0000576,4.70e-48,59;CL:0000040,4.70e-48,59;CL:0000559,4.70e-48,59;CL:0000473,9.02e-48,48;CL:0000234,9.02e-48,48;CL:0000860,3.19e-41,42;CL:0002057,3.19e-41,42;CL:0000763,3.97e-38,108;CL:0000049,3.97e-38,108;CL:0000738,6.01e-27,136;CL:0002031,8.68e-26,120;CL:0000037,3.42e-24,168;CL:0002087,2.38e-23,115;CL:0002032,1.40e-22,161;CL:0000837,1.40e-22,161;CL:0000988,1.86e-21,177;CL:0002393,4.64e-08,9;CL:0002397,4.64e-08,9;CL:0000235,8.21e-08,6|ontology_enrichment_development_v019=CL:0002057;8.78e-30;42!CL:0000049;2.37e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.76e-44!115;UBERON:0002390!1.07e-40!102;UBERON:0003061!1.07e-40!102;UBERON:0002371!6.98e-39!80;UBERON:0002193!3.19e-36!112;UBERON:0001474!6.16e-34!86;UBERON:0002405!5.71e-30!115;UBERON:0004765!4.34e-26!101;UBERON:0001434!4.34e-26!101;UBERON:0001049!8.30e-21!57;UBERON:0005068!8.30e-21!57;UBERON:0006241!8.30e-21!57;UBERON:0007135!8.30e-21!57;UBERON:0002616!1.48e-16!59;UBERON:0003080!2.09e-15!42;UBERON:0002780!6.00e-15!41;UBERON:0001890!6.00e-15!41;UBERON:0006240!6.00e-15!41;UBERON:0000955!2.66e-14!69;UBERON:0006238!2.66e-14!69;UBERON:0001017!4.76e-14!82;UBERON:0005743!2.84e-13!86;UBERON:0002020!9.87e-13!34;UBERON:0003528!9.87e-13!34;UBERON:0001893!1.09e-12!34;UBERON:0003081!2.92e-12!216;UBERON:0003075!3.16e-12!86;UBERON:0007284!3.16e-12!86;UBERON:0002791!3.33e-12!33;UBERON:0001869!2.19e-11!32;UBERON:0002346!7.09e-11!90;UBERON:0000073!8.36e-11!94;UBERON:0001016!8.36e-11!94;UBERON:0002204!5.19e-10!167;UBERON:0002619!7.89e-10!22;UBERON:0001950!8.39e-09!20;UBERON:0000062!7.33e-08!511;UBERON:0003056!7.50e-08!61;UBERON:0000956!7.52e-08!25;UBERON:0000203!7.52e-08!25;UBERON:0002420!6.28e-07!9;UBERON:0007245!6.28e-07!9;UBERON:0010009!6.28e-07!9;UBERON:0010011!6.28e-07!9;UBERON:0000454!6.28e-07!9;UBERON:0002308!6.88e-07!9;UBERON:0000125!6.88e-07!9|ontology_enrichment_uberon_v019=UBERON:0000073;1.88e-12;53!UBERON:0002616;1.88e-12;53!UBERON:0002780;2.01e-12;41!UBERON:0001890;2.01e-12;41!UBERON:0007023;2.67e-12;114!UBERON:0001893;3.99e-12;34!UBERON:0003528;4.29e-12;34!UBERON:0002020;4.29e-12;34!UBERON:0002791;1.63e-11;32!UBERON:0001869;2.47e-11;32!UBERON:0002619;2.52e-10;22!UBERON:0001950;4.39e-09;20!UBERON:0000956;1.81e-08;25!UBERON:0000203;1.81e-08;25!UBERON:0002420;3.68e-08;9!UBERON:0007245;3.68e-08;9!UBERON:0010009;3.68e-08;9!UBERON:0010011;3.68e-08;9!UBERON:0000454;3.68e-08;9!UBERON:0000125;4.06e-08;9!UBERON:0002308;4.06e-08;9!UBERON:0001017;1.02e-07;75!UBERON:0000955;2.38e-07;68|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.94e-48,76;UBERON:0007023,5.67e-45,114;UBERON:0002390,6.08e-44,98;UBERON:0003061,6.08e-44,98;UBERON:0002405,4.84e-43,93;UBERON:0001474,1.41e-42,82;UBERON:0002193,7.28e-40,108;UBERON:0004765,1.78e-36,90;UBERON:0001434,1.91e-31,100;UBERON:0001049,2.84e-23,56;UBERON:0005068,2.84e-23,56;UBERON:0006241,2.84e-23,56;UBERON:0007135,2.84e-23,56;UBERON:0000073,4.67e-21,53;UBERON:0002616,4.67e-21,53;UBERON:0002780,3.47e-17,41;UBERON:0001890,3.47e-17,41;UBERON:0003080,3.47e-17,41;UBERON:0006240,3.47e-17,41;UBERON:0001017,4.46e-16,81;UBERON:0000955,1.22e-15,68;UBERON:0006238,1.22e-15,68;UBERON:0003081,2.77e-15,203;UBERON:0003075,1.07e-14,82;UBERON:0007284,1.07e-14,82;UBERON:0003528,2.51e-14,34;UBERON:0002020,2.51e-14,34;UBERON:0001893,2.81e-14,34;UBERON:0002204,1.08e-13,167;UBERON:0001016,1.54e-13,89;UBERON:0002346,2.64e-13,86;UBERON:0002791,6.76e-13,32;UBERON:0001869,1.05e-12,32;UBERON:0002619,2.65e-10,22;UBERON:0003056,1.59e-09,61;UBERON:0000923,2.45e-09,560;UBERON:0010316,2.45e-09,560;UBERON:0005291,2.45e-09,560;UBERON:0006598,2.45e-09,560;UBERON:0010317,2.45e-09,560;UBERON:0002532,2.45e-09,560;UBERON:0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84868 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18437 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=37bp_to_ENST00000522902_5end | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_2_at_HAVCR2_5end | |||
|id=chr5:156536036..156536065,- | |||
|ontology_enrichment_celltype=CL:0000557!2.67e-41!71;CL:0000839!2.27e-38!70;CL:0000766!5.46e-38!76;CL:0002009!1.02e-37!65;CL:0002194!3.09e-36!63;CL:0000576!3.09e-36!63;CL:0000040!3.09e-36!63;CL:0000559!3.09e-36!63;CL:0000763!3.88e-36!112;CL:0000049!3.88e-36!112;CL:0002057!1.10e-33!42;CL:0000037!5.29e-31!172;CL:0000566!5.29e-31!172;CL:0000738!1.25e-30!140;CL:0000860!5.35e-30!45;CL:0002032!4.97e-29!165;CL:0000837!4.97e-29!165;CL:0002031!3.09e-28!124;CL:0000988!1.74e-27!182;CL:0002087!1.51e-25!119;CL:0002393!7.95e-07!9;CL:0002397!7.95e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.18e-31;39!CL:0000234;1.18e-31;39!CL:0000860;1.48e-31;33!CL:0002057;1.48e-31;33!CL:0000576;3.02e-26;48!CL:0000766;1.66e-21;69!CL:0000763;3.02e-12;100!CL:0000235;8.17e-08;6!CL:0000738;1.26e-07;136!CL:0002087;6.59e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.53e-54,67;CL:0000766,1.85e-50,72;CL:0002009,6.59e-50,61;CL:0000839,1.22e-49,66;CL:0002194,4.70e-48,59;CL:0000576,4.70e-48,59;CL:0000040,4.70e-48,59;CL:0000559,4.70e-48,59;CL:0000473,9.02e-48,48;CL:0000234,9.02e-48,48;CL:0000860,3.19e-41,42;CL:0002057,3.19e-41,42;CL:0000763,3.97e-38,108;CL:0000049,3.97e-38,108;CL:0000738,6.01e-27,136;CL:0002031,8.68e-26,120;CL:0000037,3.42e-24,168;CL:0002087,2.38e-23,115;CL:0002032,1.40e-22,161;CL:0000837,1.40e-22,161;CL:0000988,1.86e-21,177;CL:0002393,4.64e-08,9;CL:0002397,4.64e-08,9;CL:0000235,8.21e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;8.78e-30;42!CL:0000049;2.37e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.76e-44!115;UBERON:0002390!1.07e-40!102;UBERON:0003061!1.07e-40!102;UBERON:0002371!6.98e-39!80;UBERON:0002193!3.19e-36!112;UBERON:0001474!6.16e-34!86;UBERON:0002405!5.71e-30!115;UBERON:0004765!4.34e-26!101;UBERON:0001434!4.34e-26!101;UBERON:0001049!8.30e-21!57;UBERON:0005068!8.30e-21!57;UBERON:0006241!8.30e-21!57;UBERON:0007135!8.30e-21!57;UBERON:0002616!1.48e-16!59;UBERON:0003080!2.09e-15!42;UBERON:0002780!6.00e-15!41;UBERON:0001890!6.00e-15!41;UBERON:0006240!6.00e-15!41;UBERON:0000955!2.66e-14!69;UBERON:0006238!2.66e-14!69;UBERON:0001017!4.76e-14!82;UBERON:0005743!2.84e-13!86;UBERON:0002020!9.87e-13!34;UBERON:0003528!9.87e-13!34;UBERON:0001893!1.09e-12!34;UBERON:0003081!2.92e-12!216;UBERON:0003075!3.16e-12!86;UBERON:0007284!3.16e-12!86;UBERON:0002791!3.33e-12!33;UBERON:0001869!2.19e-11!32;UBERON:0002346!7.09e-11!90;UBERON:0000073!8.36e-11!94;UBERON:0001016!8.36e-11!94;UBERON:0002204!5.19e-10!167;UBERON:0002619!7.89e-10!22;UBERON:0001950!8.39e-09!20;UBERON:0000062!7.33e-08!511;UBERON:0003056!7.50e-08!61;UBERON:0000956!7.52e-08!25;UBERON:0000203!7.52e-08!25;UBERON:0002420!6.28e-07!9;UBERON:0007245!6.28e-07!9;UBERON:0010009!6.28e-07!9;UBERON:0010011!6.28e-07!9;UBERON:0000454!6.28e-07!9;UBERON:0002308!6.88e-07!9;UBERON:0000125!6.88e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.88e-12;53!UBERON:0002616;1.88e-12;53!UBERON:0002780;2.01e-12;41!UBERON:0001890;2.01e-12;41!UBERON:0007023;2.67e-12;114!UBERON:0001893;3.99e-12;34!UBERON:0003528;4.29e-12;34!UBERON:0002020;4.29e-12;34!UBERON:0002791;1.63e-11;32!UBERON:0001869;2.47e-11;32!UBERON:0002619;2.52e-10;22!UBERON:0001950;4.39e-09;20!UBERON:0000956;1.81e-08;25!UBERON:0000203;1.81e-08;25!UBERON:0002420;3.68e-08;9!UBERON:0007245;3.68e-08;9!UBERON:0010009;3.68e-08;9!UBERON:0010011;3.68e-08;9!UBERON:0000454;3.68e-08;9!UBERON:0000125;4.06e-08;9!UBERON:0002308;4.06e-08;9!UBERON:0001017;1.02e-07;75!UBERON:0000955;2.38e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.94e-48,76;UBERON:0007023,5.67e-45,114;UBERON:0002390,6.08e-44,98;UBERON:0003061,6.08e-44,98;UBERON:0002405,4.84e-43,93;UBERON:0001474,1.41e-42,82;UBERON:0002193,7.28e-40,108;UBERON:0004765,1.78e-36,90;UBERON:0001434,1.91e-31,100;UBERON:0001049,2.84e-23,56;UBERON:0005068,2.84e-23,56;UBERON:0006241,2.84e-23,56;UBERON:0007135,2.84e-23,56;UBERON:0000073,4.67e-21,53;UBERON:0002616,4.67e-21,53;UBERON:0002780,3.47e-17,41;UBERON:0001890,3.47e-17,41;UBERON:0003080,3.47e-17,41;UBERON:0006240,3.47e-17,41;UBERON:0001017,4.46e-16,81;UBERON:0000955,1.22e-15,68;UBERON:0006238,1.22e-15,68;UBERON:0003081,2.77e-15,203;UBERON:0003075,1.07e-14,82;UBERON:0007284,1.07e-14,82;UBERON:0003528,2.51e-14,34;UBERON:0002020,2.51e-14,34;UBERON:0001893,2.81e-14,34;UBERON:0002204,1.08e-13,167;UBERON:0001016,1.54e-13,89;UBERON:0002346,2.64e-13,86;UBERON:0002791,6.76e-13,32;UBERON:0001869,1.05e-12,32;UBERON:0002619,2.65e-10,22;UBERON:0003056,1.59e-09,61;UBERON:0000923,2.45e-09,560;UBERON:0010316,2.45e-09,560;UBERON:0005291,2.45e-09,560;UBERON:0006598,2.45e-09,560;UBERON:0010317,2.45e-09,560;UBERON:0002532,2.45e-09,560;UBERON:0001950,4.50e-09,20;UBERON:0010371,4.73e-09,104;UBERON:0002050,5.92e-09,564;UBERON:0000956,1.89e-08,25;UBERON:0000203,1.89e-08,25;UBERON:0005423,2.89e-08,581;UBERON:0002420,3.48e-08,9;UBERON:0007245,3.48e-08,9;UBERON:0010009,3.48e-08,9;UBERON:0010011,3.48e-08,9;UBERON:0000454,3.48e-08,9;UBERON:0000125,3.89e-08,9;UBERON:0002308,3.89e-08,9;UBERON:0000922,1.35e-07,592;UBERON:0003076,2.61e-07,15;UBERON:0003057,2.61e-07,15;UBERON:0010314,7.57e-07,132 | |||
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| |||
|short_description=p2@HAVCR2 | |||
}} |
Revision as of 14:23, 13 September 2013
Short description: | p2@HAVCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HAVCR2_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | 37bp_to_ENST00000522902_5end |
EntrezGene: | HAVCR2 |
HGNC: | 18437 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.53e-54 | 67 |
myeloid leukocyte | 1.85e-50 | 72 |
macrophage dendritic cell progenitor | 6.59e-50 | 61 |
myeloid lineage restricted progenitor cell | 1.22e-49 | 66 |
monopoietic cell | 4.70e-48 | 59 |
monocyte | 4.70e-48 | 59 |
monoblast | 4.70e-48 | 59 |
promonocyte | 4.70e-48 | 59 |
defensive cell | 9.02e-48 | 48 |
phagocyte | 9.02e-48 | 48 |
classical monocyte | 3.19e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.19e-41 | 42 |
myeloid cell | 3.97e-38 | 108 |
common myeloid progenitor | 3.97e-38 | 108 |
leukocyte | 6.01e-27 | 136 |
hematopoietic lineage restricted progenitor cell | 8.68e-26 | 120 |
hematopoietic stem cell | 3.42e-24 | 168 |
nongranular leukocyte | 2.38e-23 | 115 |
hematopoietic oligopotent progenitor cell | 1.40e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-22 | 161 |
hematopoietic cell | 1.86e-21 | 177 |
intermediate monocyte | 4.64e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.64e-08 | 9 |
macrophage | 8.21e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.