FFCP PHASE1:Hg19::chr5:150408168..150408181,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-478bp_to_CU690655_5end|coexpression_cluster_id=C331|description=CAGE_peak_5_at_CU690655_5end|id=chr5:150408168..150408181,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002615;1.18e-12;3!CL:0000136;9.71e-11;13!CL:0002616;5.79e-10;1|ontology_enrichment_celltype_v019_2=CL:0002615,1.21e-12,3;CL:0002616,5.79e-10,1;CL:0000136,2.30e-09,15|ontology_enrichment_development_v019=UBERON:0010227;1.83e-09;1!UBERON:0007123;9.92e-08;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;5.51e-18;2!DOID:178;9.29e-10;1!DOID:326;9.29e-10;1!DOID:3978;9.29e-10;1!DOID:3394;9.29e-10;1!DOID:5844;9.29e-10;1!DOID:1287;1.88e-09;4|ontology_enrichment_disease_v019_2=DOID:114,8.08e-18,2;DOID:178,1.15e-09,1;DOID:326,1.15e-09,1;DOID:3978,1.15e-09,1;DOID:3394,1.15e-09,1;DOID:5844,1.15e-09,1;DOID:1287,2.27e-09,4|ontology_enrichment_uberon=UBERON:0007023!9.27e-13!115;UBERON:0000062!2.73e-07!511|ontology_enrichment_uberon_v019=UBERON:0002079;1.83e-09;1!UBERON:0000996;1.83e-09;1!UBERON:0002171;1.83e-09;1!UBERON:0002426;1.83e-09;1!UBERON:0003831;1.83e-09;1!UBERON:0003898;1.83e-09;1!UBERON:0004830;1.83e-09;1!UBERON:0006518;1.83e-09;1!UBERON:0008949;1.83e-09;1!UBERON:0003830;1.83e-09;1!UBERON:0005175;1.83e-09;1!UBERON:0001774;1.83e-09;1!UBERON:0000101;1.83e-09;1!UBERON:0001103;1.83e-09;1!UBERON:0002167;1.83e-09;1!UBERON:0002046;9.92e-08;5!UBERON:0003688;9.60e-07;6!UBERON:0002358;9.60e-07;6!UBERON:0003684;9.60e-07;6!UBERON:0001178;9.60e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.36e-09,1;UBERON:0006518,1.36e-09,1;UBERON:0008949,1.36e-09,1;UBERON:0000101,1.36e-09,1;UBERON:0002167,1.36e-09,1;UBERON:0002426,1.48e-09,1;UBERON:0003831,1.48e-09,1;UBERON:0003898,1.48e-09,1;UBERON:0004830,1.48e-09,1;UBERON:0003830,1.48e-09,1;UBERON:0005175,1.48e-09,1;UBERON:0001774,1.48e-09,1;UBERON:0001103,1.48e-09,1;UBERON:0010084,1.48e-09,1;UBERON:0002079,1.62e-09,1;UBERON:0000996,2.08e-09,1;UBERON:0002046,1.08e-07,5;UBERON:0004117,1.08e-07,5;UBERON:0007689,1.08e-07,5;UBERON:0007123,1.08e-07,5;UBERON:0003091,1.08e-07,5;UBERON:0003688,9.74e-07,6;UBERON:0002358,9.74e-07,6;UBERON:0003684,9.74e-07,6;UBERON:0001178,9.74e-07,6|phase1_expression=0.726713517082227,0.856402095563933,0.563817616383885,4.00293193412522,8.04529969969118,3.48935409640147,0,0.631719873426831,1.82829939739887,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,2.70852973188684,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0.580418477257168,0,1.24564449799115,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68507104770311,0,0,0.324547393654683,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0.325378394664303,0.309123034943167,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.192444225451024,1.34060455107157,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,4.34999745260876,0,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0.611030144933625,0,0,0.104421949505455,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0,0.52418000472609,0.171986032471617,0,0,0,0.193978032976839,0,2.48578814858586,0,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0,2.1964690054889,3.004582336956,0,0.134366944973453,0.360299883542404,0,0.157566364614447,0.164831716762333,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,3.86147965766071,1.04909176269996,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,3.97520666736664,0,0,0,0,0.320362237703084,0,1.65695622138878,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,1.00067161847319,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.852935927603924,0.23806443146374,0,0,0.897054900644907,3.37329938874274,2.22328907854041,0.217716747896961,0.342233301085281,0.0673520530145875,0.573777643141411,0,0,0,0,0,0,0.122241444182866,0,1.33151354837103,0,0|short_description=p5@CU690655}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-478bp_to_CU690655_5end | |||
|coexpression_cluster_id=C331 | |||
|description=CAGE_peak_5_at_CU690655_5end | |||
|id=chr5:150408168..150408181,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.18e-12;3!CL:0000136;9.71e-11;13!CL:0002616;5.79e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.21e-12,3;CL:0002616,5.79e-10,1;CL:0000136,2.30e-09,15 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.83e-09;1!UBERON:0007123;9.92e-08;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;5.51e-18;2!DOID:178;9.29e-10;1!DOID:326;9.29e-10;1!DOID:3978;9.29e-10;1!DOID:3394;9.29e-10;1!DOID:5844;9.29e-10;1!DOID:1287;1.88e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.08e-18,2;DOID:178,1.15e-09,1;DOID:326,1.15e-09,1;DOID:3978,1.15e-09,1;DOID:3394,1.15e-09,1;DOID:5844,1.15e-09,1;DOID:1287,2.27e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.27e-13!115;UBERON:0000062!2.73e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.83e-09;1!UBERON:0000996;1.83e-09;1!UBERON:0002171;1.83e-09;1!UBERON:0002426;1.83e-09;1!UBERON:0003831;1.83e-09;1!UBERON:0003898;1.83e-09;1!UBERON:0004830;1.83e-09;1!UBERON:0006518;1.83e-09;1!UBERON:0008949;1.83e-09;1!UBERON:0003830;1.83e-09;1!UBERON:0005175;1.83e-09;1!UBERON:0001774;1.83e-09;1!UBERON:0000101;1.83e-09;1!UBERON:0001103;1.83e-09;1!UBERON:0002167;1.83e-09;1!UBERON:0002046;9.92e-08;5!UBERON:0003688;9.60e-07;6!UBERON:0002358;9.60e-07;6!UBERON:0003684;9.60e-07;6!UBERON:0001178;9.60e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.36e-09,1;UBERON:0006518,1.36e-09,1;UBERON:0008949,1.36e-09,1;UBERON:0000101,1.36e-09,1;UBERON:0002167,1.36e-09,1;UBERON:0002426,1.48e-09,1;UBERON:0003831,1.48e-09,1;UBERON:0003898,1.48e-09,1;UBERON:0004830,1.48e-09,1;UBERON:0003830,1.48e-09,1;UBERON:0005175,1.48e-09,1;UBERON:0001774,1.48e-09,1;UBERON:0001103,1.48e-09,1;UBERON:0010084,1.48e-09,1;UBERON:0002079,1.62e-09,1;UBERON:0000996,2.08e-09,1;UBERON:0002046,1.08e-07,5;UBERON:0004117,1.08e-07,5;UBERON:0007689,1.08e-07,5;UBERON:0007123,1.08e-07,5;UBERON:0003091,1.08e-07,5;UBERON:0003688,9.74e-07,6;UBERON:0002358,9.74e-07,6;UBERON:0003684,9.74e-07,6;UBERON:0001178,9.74e-07,6 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.563817616383885,4.00293193412522,8.04529969969118,3.48935409640147,0,0.631719873426831,1.82829939739887,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,2.70852973188684,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0.580418477257168,0,1.24564449799115,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68507104770311,0,0,0.324547393654683,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0.325378394664303,0.309123034943167,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.192444225451024,1.34060455107157,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,4.34999745260876,0,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0.611030144933625,0,0,0.104421949505455,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0,0.52418000472609,0.171986032471617,0,0,0,0.193978032976839,0,2.48578814858586,0,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0,2.1964690054889,3.004582336956,0,0.134366944973453,0.360299883542404,0,0.157566364614447,0.164831716762333,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,3.86147965766071,1.04909176269996,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,3.97520666736664,0,0,0,0,0.320362237703084,0,1.65695622138878,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,1.00067161847319,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.852935927603924,0.23806443146374,0,0,0.897054900644907,3.37329938874274,2.22328907854041,0.217716747896961,0.342233301085281,0.0673520530145875,0.573777643141411,0,0,0,0,0,0,0.122241444182866,0,1.33151354837103,0,0 | |||
|short_description=p5@CU690655 | |||
}} |
Revision as of 14:10, 13 September 2013
Short description: | p5@CU690655 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CU690655_5end |
Coexpression cluster: | C331_kidney_thyroid_breast_Adipocyte_adipose_retina_vagina |
Association with transcript: | -478bp_to_CU690655_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.21e-12 | 3 |
perirenal adipocyte cell | 5.79e-10 | 1 |
fat cell | 2.30e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.36e-09 | 1 |
right lung lobe | 1.36e-09 | 1 |
lower lobe of lung | 1.36e-09 | 1 |
lobe of lung | 1.36e-09 | 1 |
right lung | 1.36e-09 | 1 |
chest muscle | 1.48e-09 | 1 |
respiratory system muscle | 1.48e-09 | 1 |
skeletal muscle of trunk | 1.48e-09 | 1 |
respiratory system skeletal muscle | 1.48e-09 | 1 |
thoracic segment muscle | 1.48e-09 | 1 |
chest organ | 1.48e-09 | 1 |
muscle of trunk | 1.48e-09 | 1 |
diaphragm | 1.48e-09 | 1 |
future diaphragm | 1.48e-09 | 1 |
left cardiac atrium | 1.62e-09 | 1 |
vagina | 2.08e-09 | 1 |
thyroid gland | 1.08e-07 | 5 |
pharyngeal pouch | 1.08e-07 | 5 |
thyroid diverticulum | 1.08e-07 | 5 |
pharyngeal pouch 2 | 1.08e-07 | 5 |
thyroid primordium | 1.08e-07 | 5 |
omentum | 9.74e-07 | 6 |
peritoneum | 9.74e-07 | 6 |
abdominal cavity | 9.74e-07 | 6 |
visceral peritoneum | 9.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.08e-18 | 2 |
vascular disease | 1.15e-09 | 1 |
ischemia | 1.15e-09 | 1 |
extrinsic cardiomyopathy | 1.15e-09 | 1 |
myocardial ischemia | 1.15e-09 | 1 |
myocardial infarction | 1.15e-09 | 1 |
cardiovascular system disease | 2.27e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.