FFCP PHASE1:Mm9::chr17:29411023..29411074,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=80748|HGNC=|MCL_coexpression_id=1576|UniProt=D3Z523|association_with_transcript=0bp_to_ENSMUST00000149405_5end|description=CAGE_peak_4_at_BC004004_5end|id=chr17:29411023..29411074,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.17e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.49e-17!22;UBERON:0007499!4.49e-17!22;UBERON:0006925!4.49e-17!22;UBERON:0009497!4.49e-17!22;UBERON:0000015!4.49e-17!22;UBERON:0002423!4.49e-17!22;UBERON:0006235!4.49e-17!22;UBERON:0008835!4.49e-17!22;UBERON:0003894!4.49e-17!22;UBERON:0004161!4.49e-17!22;UBERON:0008836!4.49e-17!22;UBERON:0009854!7.05e-16!23;UBERON:0009856!7.05e-16!23;UBERON:0002365!1.44e-15!25;UBERON:0002330!1.44e-15!25;UBERON:0005172!1.17e-14!49;UBERON:0005173!1.17e-14!49;UBERON:0002417!1.17e-14!49;UBERON:0000916!1.17e-14!49;UBERON:0009569!2.03e-14!66;UBERON:0003914!1.00e-13!47;UBERON:0005256!4.01e-09!47;UBERON:0005177!5.17e-09!85|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.44e-23,22;UBERON:0007499,2.44e-23,22;UBERON:0006925,2.44e-23,22;UBERON:0009497,2.44e-23,22;UBERON:0000015,2.44e-23,22;UBERON:0002423,2.44e-23,22;UBERON:0006235,2.44e-23,22;UBERON:0008835,2.44e-23,22;UBERON:0003894,2.44e-23,22;UBERON:0004161,2.44e-23,22;UBERON:0008836,2.44e-23,22;UBERON:0002365,4.66e-22,25;UBERON:0002330,4.66e-22,25;UBERON:0009854,5.01e-22,23;UBERON:0009856,5.01e-22,23;UBERON:0005172,9.24e-15,49;UBERON:0005173,9.24e-15,49;UBERON:0002417,9.24e-15,49;UBERON:0000916,9.24e-15,49;UBERON:0003914,9.32e-15,47;UBERON:0009569,2.06e-10,66;UBERON:0003104,3.08e-10,61;UBERON:0009142,3.08e-10,61;UBERON:0005256,4.18e-09,45;UBERON:0005177,5.23e-08,79|phase1_expression=0,0,0,0.90739263392049,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0.319984845586813,0,0.57423196411502,0.430761996159075,0.215471232685889,1.33016393619462,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0.075726193333184,0,2.6087803983151,18.0689014166091,6.11974200336975,31.3027851149934,33.1385972898311,9.40856462904405,8.98844288843212,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,9.7056297761201,0,0.148442139064825,0.173485326766136,0.608930956624282,0.691846491768175,1.80867168663147,0.117588707135705,0.251333182659351,0.988779870937496,1.59059292611903,0,0,0.441683036920787,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.505445516867349,1.26265113531884,0,0,0,0.753524089178575,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0.268273401399619,0,0.987359099480883,6.40253109908471,10.0525323836861,15.3509986796599,13.8316572633362,20.6677884890973,0,0,0,0.264450566663544,0,0.232236671860439,0,0,0,0,0.474529061544512,0.658795818896044,0.251335208800269,0.198956472041151,0.779856348476481,0,0.432276099749388,0.199141273254367,0,0.228497025219458,0,0.407302655690628,1.16371492300575,1.68325967736765,5.31186911843761,17.7132177575523,24.8057989989372,17.0288086212085,13.3403682189217,0.166845105716094,0.786235980452812,1.57403478669398,2.63718157805054,8.92355491083942,15.2775511068852,22.727994858614,3.89124544260085,15.3754391385326,7.18841032636773,18.2349064357567,20.9065240986756,24.5001511608698,32.1121370204223,26.5343936749852,1.47802552133284,0,0,0,0,0,0.952174563544055,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.983179888294428,1.03610989119537,0.723245292907558,0,0,0,0,0,0,0,2.27223834483936,0,0,0,0,0,0,0,0.292255857911312,0,0,0,1.06839362200353,0,0,1.32745138339963,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0.32977250588296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0.655087691238533,1.21377911746339,2.31429676030941,6.28214260761671,0,10.5627683224777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0.735374033800057,1.77797382241292,1.23621034343337,1.92551525755089,2.27427490587418,3.04175159868288,1.88626341386076,1.68554713445788,1.72867911493147,1.83793500657962,0.476293691283074,1.39061191133827,1.92909220463705,2.06042950401653,2.50238164228475,1.02860775715625,0.70990322463735,0.715308569841963,1.0174249164263,2.25862512996793,1.52306294205018,1.82927972872773,1.57841826862706,1.49384525230448,0,1.66089025373844,1.87158516513571,1.22769312950907,2.01417893541756,1.15743966588685,0,3.74290573512653,0.429742108096597,0,0,0.463735671240843|short_description=p4@BC004004}} | ||
|EntrezGene=80748 | |||
|HGNC= | |||
|MCL_coexpression_id=1576 | |||
|UniProt=D3Z523 | |||
|association_with_transcript=0bp_to_ENSMUST00000149405_5end | |||
|description=CAGE_peak_4_at_BC004004_5end | |||
|id=chr17:29411023..29411074,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.17e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.49e-17!22;UBERON:0007499!4.49e-17!22;UBERON:0006925!4.49e-17!22;UBERON:0009497!4.49e-17!22;UBERON:0000015!4.49e-17!22;UBERON:0002423!4.49e-17!22;UBERON:0006235!4.49e-17!22;UBERON:0008835!4.49e-17!22;UBERON:0003894!4.49e-17!22;UBERON:0004161!4.49e-17!22;UBERON:0008836!4.49e-17!22;UBERON:0009854!7.05e-16!23;UBERON:0009856!7.05e-16!23;UBERON:0002365!1.44e-15!25;UBERON:0002330!1.44e-15!25;UBERON:0005172!1.17e-14!49;UBERON:0005173!1.17e-14!49;UBERON:0002417!1.17e-14!49;UBERON:0000916!1.17e-14!49;UBERON:0009569!2.03e-14!66;UBERON:0003914!1.00e-13!47;UBERON:0005256!4.01e-09!47;UBERON:0005177!5.17e-09!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.44e-23,22;UBERON:0007499,2.44e-23,22;UBERON:0006925,2.44e-23,22;UBERON:0009497,2.44e-23,22;UBERON:0000015,2.44e-23,22;UBERON:0002423,2.44e-23,22;UBERON:0006235,2.44e-23,22;UBERON:0008835,2.44e-23,22;UBERON:0003894,2.44e-23,22;UBERON:0004161,2.44e-23,22;UBERON:0008836,2.44e-23,22;UBERON:0002365,4.66e-22,25;UBERON:0002330,4.66e-22,25;UBERON:0009854,5.01e-22,23;UBERON:0009856,5.01e-22,23;UBERON:0005172,9.24e-15,49;UBERON:0005173,9.24e-15,49;UBERON:0002417,9.24e-15,49;UBERON:0000916,9.24e-15,49;UBERON:0003914,9.32e-15,47;UBERON:0009569,2.06e-10,66;UBERON:0003104,3.08e-10,61;UBERON:0009142,3.08e-10,61;UBERON:0005256,4.18e-09,45;UBERON:0005177,5.23e-08,79 | |||
|phase1_expression=0,0,0,0.90739263392049,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0.319984845586813,0,0.57423196411502,0.430761996159075,0.215471232685889,1.33016393619462,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0.075726193333184,0,2.6087803983151,18.0689014166091,6.11974200336975,31.3027851149934,33.1385972898311,9.40856462904405,8.98844288843212,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,9.7056297761201,0,0.148442139064825,0.173485326766136,0.608930956624282,0.691846491768175,1.80867168663147,0.117588707135705,0.251333182659351,0.988779870937496,1.59059292611903,0,0,0.441683036920787,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.505445516867349,1.26265113531884,0,0,0,0.753524089178575,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0.268273401399619,0,0.987359099480883,6.40253109908471,10.0525323836861,15.3509986796599,13.8316572633362,20.6677884890973,0,0,0,0.264450566663544,0,0.232236671860439,0,0,0,0,0.474529061544512,0.658795818896044,0.251335208800269,0.198956472041151,0.779856348476481,0,0.432276099749388,0.199141273254367,0,0.228497025219458,0,0.407302655690628,1.16371492300575,1.68325967736765,5.31186911843761,17.7132177575523,24.8057989989372,17.0288086212085,13.3403682189217,0.166845105716094,0.786235980452812,1.57403478669398,2.63718157805054,8.92355491083942,15.2775511068852,22.727994858614,3.89124544260085,15.3754391385326,7.18841032636773,18.2349064357567,20.9065240986756,24.5001511608698,32.1121370204223,26.5343936749852,1.47802552133284,0,0,0,0,0,0.952174563544055,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.983179888294428,1.03610989119537,0.723245292907558,0,0,0,0,0,0,0,2.27223834483936,0,0,0,0,0,0,0,0.292255857911312,0,0,0,1.06839362200353,0,0,1.32745138339963,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0.32977250588296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0.655087691238533,1.21377911746339,2.31429676030941,6.28214260761671,0,10.5627683224777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0.735374033800057,1.77797382241292,1.23621034343337,1.92551525755089,2.27427490587418,3.04175159868288,1.88626341386076,1.68554713445788,1.72867911493147,1.83793500657962,0.476293691283074,1.39061191133827,1.92909220463705,2.06042950401653,2.50238164228475,1.02860775715625,0.70990322463735,0.715308569841963,1.0174249164263,2.25862512996793,1.52306294205018,1.82927972872773,1.57841826862706,1.49384525230448,0,1.66089025373844,1.87158516513571,1.22769312950907,2.01417893541756,1.15743966588685,0,3.74290573512653,0.429742108096597,0,0,0.463735671240843 | |||
|short_description=p4@BC004004 | |||
}} |
Revision as of 13:59, 13 September 2013
Short description: | p4@BC004004 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_BC004004_5end |
Coexpression cluster: | MCL_coexpression_mm9:1576 |
Association with transcript: | 0bp_to_ENSMUST00000149405_5end |
EntrezGene: | BC004004 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.17e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 2.44e-23 | 22 |
epithelial sac | 2.44e-23 | 22 |
digestive gland | 2.44e-23 | 22 |
epithelium of foregut-midgut junction | 2.44e-23 | 22 |
anatomical boundary | 2.44e-23 | 22 |
hepatobiliary system | 2.44e-23 | 22 |
foregut-midgut junction | 2.44e-23 | 22 |
hepatic diverticulum | 2.44e-23 | 22 |
liver primordium | 2.44e-23 | 22 |
septum transversum | 2.44e-23 | 22 |
liver bud | 2.44e-23 | 22 |
exocrine gland | 4.66e-22 | 25 |
exocrine system | 4.66e-22 | 25 |
digestive tract diverticulum | 5.01e-22 | 23 |
sac | 5.01e-22 | 23 |
abdomen element | 9.24e-15 | 49 |
abdominal segment element | 9.24e-15 | 49 |
abdominal segment of trunk | 9.24e-15 | 49 |
abdomen | 9.24e-15 | 49 |
epithelial tube | 9.32e-15 | 47 |
subdivision of trunk | 2.06e-10 | 66 |
mesenchyme | 3.08e-10 | 61 |
entire embryonic mesenchyme | 3.08e-10 | 61 |
trunk mesenchyme | 4.18e-09 | 45 |
trunk region element | 5.23e-08 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.