FFCP PHASE1:Hg19::chr5:142814364..142814381,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2908|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7978|TSSclassifier=S|UniProt=|association_with_transcript=-25bp_to_ENST00000503701_5end|description=CAGE_peak_22_at_NR3C1_5end|id=chr5:142814364..142814381,-|ontology_enrichment_celltype=CL:0000738!2.90e-48!140;CL:0002087!2.90e-44!119;CL:0002031!2.05e-40!124;CL:0000037!1.54e-38!172;CL:0000566!1.54e-38!172;CL:0000988!8.78e-38!182;CL:0002032!3.45e-35!165;CL:0000837!3.45e-35!165;CL:0002057!2.81e-29!42;CL:0000860!2.08e-26!45;CL:0000766!1.15e-24!76;CL:0002194!1.24e-23!63;CL:0000576!1.24e-23!63;CL:0000040!1.24e-23!63;CL:0000559!1.24e-23!63;CL:0000557!1.42e-22!71;CL:0002009!1.90e-22!65;CL:0000839!1.05e-21!70;CL:0000838!6.02e-19!52;CL:0000542!2.34e-18!53;CL:0000051!2.34e-18!53;CL:0000763!7.37e-17!112;CL:0000049!7.37e-17!112;CL:0000791!1.13e-10!18;CL:0000789!1.13e-10!18;CL:0002420!1.13e-10!18;CL:0002419!1.13e-10!18;CL:0000790!1.13e-10!18;CL:0000945!8.35e-10!24;CL:0000826!8.35e-10!24;CL:0002393!2.79e-09!9;CL:0002397!2.79e-09!9;CL:0000084!9.79e-09!25;CL:0000827!9.79e-09!25;CL:0000134!1.22e-08!358;CL:0002320!5.52e-08!365;CL:0000624!2.31e-07!6|ontology_enrichment_celltype_v019=CL:0000473;7.27e-26;39!CL:0000234;7.27e-26;39!CL:0000860;7.54e-26;33!CL:0002057;7.54e-26;33!CL:0000576;2.17e-16;48!CL:0002087;7.73e-13;104!CL:0000784;7.00e-12;3!CL:0000766;5.41e-11;69!CL:0000624;1.78e-10;6!CL:0000738;7.10e-10;136!CL:0000791;1.92e-09;18!CL:0000789;1.92e-09;18!CL:0002419;1.92e-09;18!CL:0000084;1.43e-08;25!CL:0000988;1.18e-07;177|ontology_enrichment_celltype_v019_2=CL:0002087,2.56e-41,115;CL:0000738,3.03e-40,136;CL:0000473,2.52e-36,48;CL:0000234,2.52e-36,48;CL:0002031,8.98e-35,120;CL:0000037,1.31e-32,168;CL:0000860,3.29e-31,42;CL:0002057,3.29e-31,42;CL:0002194,1.49e-30,59;CL:0000576,1.49e-30,59;CL:0000040,1.49e-30,59;CL:0000559,1.49e-30,59;CL:0000988,1.78e-30,177;CL:0002009,2.26e-29,61;CL:0000557,1.08e-28,67;CL:0002032,4.09e-27,161;CL:0000837,4.09e-27,161;CL:0000839,9.90e-27,66;CL:0000766,1.76e-26,72;CL:0000763,3.34e-17,108;CL:0000049,3.34e-17,108;CL:0000134,4.11e-14,354;CL:0002320,1.21e-13,361;CL:0000784,3.37e-12,3;CL:0000219,5.47e-12,386;CL:0000624,1.05e-10,6;CL:0000048,5.76e-10,427;CL:0000791,8.96e-10,18;CL:0000789,8.96e-10,18;CL:0002420,8.96e-10,18;CL:0002419,8.96e-10,18;CL:0000790,8.96e-10,18;CL:0000838,1.01e-09,52;CL:0000723,1.10e-09,433;CL:0000542,1.74e-09,53;CL:0000051,1.74e-09,53;CL:0000034,2.51e-09,441;CL:0000084,7.30e-09,25;CL:0000827,7.30e-09,25|ontology_enrichment_development_v019=CL:0002057;2.08e-21;42!CL:0000790;1.92e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.37e-26!102;UBERON:0003061!1.37e-26!102;UBERON:0002193!1.92e-23!112;UBERON:0002371!2.94e-19!80;UBERON:0001474!7.55e-17!86;UBERON:0002405!8.43e-16!115;UBERON:0004765!6.10e-13!101;UBERON:0001434!6.10e-13!101;UBERON:0007023!1.55e-11!115;UBERON:0002384!4.13e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.51e-25,98;UBERON:0003061,4.51e-25,98;UBERON:0002371,1.31e-24,76;UBERON:0001474,2.22e-22,82;UBERON:0002193,4.04e-22,108;UBERON:0002405,6.45e-21,93;UBERON:0004765,7.17e-20,90;UBERON:0001434,2.68e-17,100;UBERON:0002384,5.30e-13,371;UBERON:0003081,1.74e-09,203;UBERON:0002204,4.45e-08,167|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,1.14940825229924,1.33808328233255,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0.309868802321207,0.284338464974843,0.293600439334847,2.21598163412751,0.200544447470142,0.434021741431704,0,0.32389366601898,0,0.436194716338694,0.755751887377619,0,1.16214518452842,0,0,2.01384674625505,1.0246428261164,1.89185783910868,0.689491361473237,0,1.35426486594342,0.564727018627814,0,0.674170453335254,1.53041946185451,1.60464513538047,1.27867425159808,1.64925650093358,1.39624560335142,1.27867425159808,0.290209238628584,0,0.622822248995575,1.50749199154046,0.521482918420201,1.52032191293582,0.605399502633369,1.10483290796269,3.16462387440884,0.845021145247767,1.06302149982522,1.46761051855863,0.898629049171961,1.35159203557356,2.08943262706204,0.285012743741249,0.59675003159727,0.91332076882317,1.75996244461323,1.09227722252426,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0.764546456250458,0,0.560508562981536,0.263384084775077,1.96709770113833,0.393010762749165,1.02800749499755,0,2.60737813306872,0.473447805734733,0,0.668462741311041,0.294605907474837,0.443067789167242,0.541607727530031,0.25618263945135,0.130059347559878,0.328875809207352,0,0,0.593146252648242,0.267540828089713,0,0,1.91610246800961,2.40539211837841,2.78321661221453,0.95569624297229,0,0.950452044448374,1.80690142893327,0.895906278080929,0,1.65744076430812,1.64225599384209,0.201606743224732,0.802320587350522,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,1.19245312152671,1.71598473234038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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2908 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_ENST00000503701_5end | |||
|description=CAGE_peak_22_at_NR3C1_5end | |||
|id=chr5:142814364..142814381,- | |||
|ontology_enrichment_celltype=CL:0000738!2.90e-48!140;CL:0002087!2.90e-44!119;CL:0002031!2.05e-40!124;CL:0000037!1.54e-38!172;CL:0000566!1.54e-38!172;CL:0000988!8.78e-38!182;CL:0002032!3.45e-35!165;CL:0000837!3.45e-35!165;CL:0002057!2.81e-29!42;CL:0000860!2.08e-26!45;CL:0000766!1.15e-24!76;CL:0002194!1.24e-23!63;CL:0000576!1.24e-23!63;CL:0000040!1.24e-23!63;CL:0000559!1.24e-23!63;CL:0000557!1.42e-22!71;CL:0002009!1.90e-22!65;CL:0000839!1.05e-21!70;CL:0000838!6.02e-19!52;CL:0000542!2.34e-18!53;CL:0000051!2.34e-18!53;CL:0000763!7.37e-17!112;CL:0000049!7.37e-17!112;CL:0000791!1.13e-10!18;CL:0000789!1.13e-10!18;CL:0002420!1.13e-10!18;CL:0002419!1.13e-10!18;CL:0000790!1.13e-10!18;CL:0000945!8.35e-10!24;CL:0000826!8.35e-10!24;CL:0002393!2.79e-09!9;CL:0002397!2.79e-09!9;CL:0000084!9.79e-09!25;CL:0000827!9.79e-09!25;CL:0000134!1.22e-08!358;CL:0002320!5.52e-08!365;CL:0000624!2.31e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.27e-26;39!CL:0000234;7.27e-26;39!CL:0000860;7.54e-26;33!CL:0002057;7.54e-26;33!CL:0000576;2.17e-16;48!CL:0002087;7.73e-13;104!CL:0000784;7.00e-12;3!CL:0000766;5.41e-11;69!CL:0000624;1.78e-10;6!CL:0000738;7.10e-10;136!CL:0000791;1.92e-09;18!CL:0000789;1.92e-09;18!CL:0002419;1.92e-09;18!CL:0000084;1.43e-08;25!CL:0000988;1.18e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.56e-41,115;CL:0000738,3.03e-40,136;CL:0000473,2.52e-36,48;CL:0000234,2.52e-36,48;CL:0002031,8.98e-35,120;CL:0000037,1.31e-32,168;CL:0000860,3.29e-31,42;CL:0002057,3.29e-31,42;CL:0002194,1.49e-30,59;CL:0000576,1.49e-30,59;CL:0000040,1.49e-30,59;CL:0000559,1.49e-30,59;CL:0000988,1.78e-30,177;CL:0002009,2.26e-29,61;CL:0000557,1.08e-28,67;CL:0002032,4.09e-27,161;CL:0000837,4.09e-27,161;CL:0000839,9.90e-27,66;CL:0000766,1.76e-26,72;CL:0000763,3.34e-17,108;CL:0000049,3.34e-17,108;CL:0000134,4.11e-14,354;CL:0002320,1.21e-13,361;CL:0000784,3.37e-12,3;CL:0000219,5.47e-12,386;CL:0000624,1.05e-10,6;CL:0000048,5.76e-10,427;CL:0000791,8.96e-10,18;CL:0000789,8.96e-10,18;CL:0002420,8.96e-10,18;CL:0002419,8.96e-10,18;CL:0000790,8.96e-10,18;CL:0000838,1.01e-09,52;CL:0000723,1.10e-09,433;CL:0000542,1.74e-09,53;CL:0000051,1.74e-09,53;CL:0000034,2.51e-09,441;CL:0000084,7.30e-09,25;CL:0000827,7.30e-09,25 | |||
|ontology_enrichment_development_v019=CL:0002057;2.08e-21;42!CL:0000790;1.92e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.37e-26!102;UBERON:0003061!1.37e-26!102;UBERON:0002193!1.92e-23!112;UBERON:0002371!2.94e-19!80;UBERON:0001474!7.55e-17!86;UBERON:0002405!8.43e-16!115;UBERON:0004765!6.10e-13!101;UBERON:0001434!6.10e-13!101;UBERON:0007023!1.55e-11!115;UBERON:0002384!4.13e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.51e-25,98;UBERON:0003061,4.51e-25,98;UBERON:0002371,1.31e-24,76;UBERON:0001474,2.22e-22,82;UBERON:0002193,4.04e-22,108;UBERON:0002405,6.45e-21,93;UBERON:0004765,7.17e-20,90;UBERON:0001434,2.68e-17,100;UBERON:0002384,5.30e-13,371;UBERON:0003081,1.74e-09,203;UBERON:0002204,4.45e-08,167 | |||
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|short_description=p22@NR3C1 | |||
}} |
Revision as of 13:45, 13 September 2013
Short description: | p22@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_NR3C1_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000503701_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.51e-25 | 98 |
blood island | 4.51e-25 | 98 |
bone marrow | 1.31e-24 | 76 |
bone element | 2.22e-22 | 82 |
hemolymphoid system | 4.04e-22 | 108 |
immune system | 6.45e-21 | 93 |
skeletal element | 7.17e-20 | 90 |
skeletal system | 2.68e-17 | 100 |
connective tissue | 5.30e-13 | 371 |
lateral plate mesoderm | 1.74e-09 | 203 |
musculoskeletal system | 4.45e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.