FFCP PHASE1:Hg19::chr5:142780189..142780223,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2908|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7978|TSSclassifier=N|UniProt=B6ZGU6,F5ATB7,F5ATB8,F1D8N4|association_with_transcript=180bp_to_AB307716,AB527290,EU446477,HQ450643,HQ450644,HQ692822_5end|coexpression_cluster_id=C4472|description=CAGE_peak_6_at_NR3C1_5end|id=chr5:142780189..142780223,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000057,5.81e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!6.40e-07!69;UBERON:0006238!6.40e-07!69|ontology_enrichment_uberon_v019=UBERON:0004457;9.97e-07;9!UBERON:0000042;9.97e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000955,4.66e-09,68;UBERON:0006238,4.66e-09,68;UBERON:0001017,2.72e-08,81;UBERON:0000073,1.20e-07,53;UBERON:0002616,1.20e-07,53;UBERON:0001049,1.42e-07,56;UBERON:0005068,1.42e-07,56;UBERON:0006241,1.42e-07,56;UBERON:0007135,1.42e-07,56|phase1_expression=0.54503513781167,0.214100523890983,1.9733616573436,1.0007329835313,1.78784437770915,0.872338524100369,0,0,0,0,0,0.655324116390517,0.263766978228454,0.37129905888014,0,0,0,1.46062018077475,0,0,0,0,0,0,0.125542639594803,11.9969047024283,7.30695246104517,7.55623500611321,0,0.767658796194425,0,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0,0,0,0.436194716338694,0,0.242584061187816,0,0,0.309706370895104,0,0.256160706529101,0.47296445977717,0.344745680736619,0,2.70852973188684,0,0.545812300115692,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0.56738522469114,1.86846674698672,0,0,0,0.605399502633369,1.47311054395026,1.26584954976354,0,0,0.209658645508376,0,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,1.70763890732835,0,0.382273228125229,0,0,0,0.786839080455332,1.17903228824749,1.43921049299656,0,0,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0,1.14966148080576,0.68725489096526,1.77113784413652,0,0,0,0,0.127986611154418,0,0,0,0,0.534880391567015,0.144824403882799,0,0.670700859703636,0.12786256184353,1.80719576192283,0.50133791063589,0.869079113764942,0,0.486634870302636,0,0,0,0.392937226493138,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,1.98788780678127,3.92554586160197,2.78059279707759,2.58152958673932,0.709336764396714,0,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0.302714855289863,1.15235184896,0.468642863667593,0,0,0,0.352303495931295,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.413303124703062,0,0.989067717114227,0,0,0,0,0,2.19488810440419,1.22595118319608,0.45071417671979,0.567160915800105,0.358779271377724,1.06778694409284,5.29829752898905,4.50136644126603,4.43125875725287,1.28820270022815,2.60563598864226,2.86919764810153,1.65642908774038,2.01947019395292,3.86609574297657,2.7479829659198,0,0,0,0,0,0.286804595389004,0,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,1.0647612003586,0.674338760312407,0.723033089650446,0.772057809126758,0.435758888184812,0.474541238222193,1.07865046528132,0.98110732562673,0,0,0,0,0,1.26755034821831,0,0,0,0,0.857839051492628,0.109750285408626,0,0.201057944823262,0.277765335475589,0,0,0,0,0.234817388471643,0,0.462985512576611,0,0.790204397959275,0,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,3.49278238541108,2.03443756959773,0.766765358330422,0.492663237895943,0.176096868026452,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.51336800074665,16.6760513327533,0,0,0,0,0,0,0,0.428933980974443,3.7983512377401,0.823240336780769,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.868687840005475,0.205476322550383,0.716243852959582,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,8.97484377612075,0.828831026872071,0,0,0,0.831883446123229,0.713715955188647,0.788512075169673,1.40569697991256,0,0,0,0.664225598535437,0.553107505625109,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0.496215615637554,1.99500565274481,1.12264037773229,1.28139149255701,2.04682899626681,0.321707842287215,0,1.54209693802656,1.06537035187876,1.8067974323038,2.59627214591811,1.39452454151951,0,0.40101294060657,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0.325378394664303,0.309123034943167,0.0915694648183434,0,0,0,1.6068392984416,0.580024309752732,0,0.15350367472613,0.137836572484531,0.966782203814463,0.435050081742686,0.426133137080504,0.267096106940212,0,0,0.127612712494584,0,0.464845549297286,4.7221852024596,0.6970372701606,2.46426864140871,0.532306030317022,0.869932992075073,0.18532421910392,2.00374841438788,1.86079184679834,0,0,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0,0.2021824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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2908 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |||
|TSSclassifier=N | |||
|UniProt=B6ZGU6,F5ATB7,F5ATB8,F1D8N4 | |||
|association_with_transcript=180bp_to_AB307716,AB527290,EU446477,HQ450643,HQ450644,HQ692822_5end | |||
|coexpression_cluster_id=C4472 | |||
|description=CAGE_peak_6_at_NR3C1_5end | |||
|id=chr5:142780189..142780223,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.81e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!6.40e-07!69;UBERON:0006238!6.40e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.97e-07;9!UBERON:0000042;9.97e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,4.66e-09,68;UBERON:0006238,4.66e-09,68;UBERON:0001017,2.72e-08,81;UBERON:0000073,1.20e-07,53;UBERON:0002616,1.20e-07,53;UBERON:0001049,1.42e-07,56;UBERON:0005068,1.42e-07,56;UBERON:0006241,1.42e-07,56;UBERON:0007135,1.42e-07,56 | |||
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| |||
|short_description=p6@NR3C1 | |||
}} |
Revision as of 13:44, 13 September 2013
Short description: | p6@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_NR3C1_5end |
Coexpression cluster: | C4472_renal_B_splenic_b_xeroderma_Mesenchymal_cord |
Association with transcript: | 180bp_to_AB307716, AB527290, EU446477, HQ450643, HQ450644, HQ692822_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | B6ZGU6F5ATB7F5ATB8F1D8N4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.81e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
brain | 4.66e-09 | 68 |
future brain | 4.66e-09 | 68 |
central nervous system | 2.72e-08 | 81 |
regional part of nervous system | 1.20e-07 | 53 |
regional part of brain | 1.20e-07 | 53 |
neural tube | 1.42e-07 | 56 |
neural rod | 1.42e-07 | 56 |
future spinal cord | 1.42e-07 | 56 |
neural keel | 1.42e-07 | 56 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.