FFCP PHASE1:Hg19::chr5:118691590..118691601,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25816|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17260|TSSclassifier=S|UniProt=O95379|association_with_transcript=0bp_to_NM_014350,uc003ksi.2_5end|description=CAGE_peak_14_at_TNFAIP8_5end|id=chr5:118691590..118691601,+|ontology_enrichment_celltype=CL:0002194!1.78e-19!63;CL:0000576!1.78e-19!63;CL:0000040!1.78e-19!63;CL:0000559!1.78e-19!63;CL:0002009!7.27e-19!65;CL:0002087!2.89e-18!119;CL:0002057!3.38e-16!42;CL:0000557!2.49e-15!71;CL:0000839!3.02e-15!70;CL:0000860!4.12e-15!45;CL:0000738!7.02e-15!140;CL:0002031!2.72e-14!124;CL:0000766!8.98e-14!76;CL:0000048!3.71e-13!430;CL:0000723!1.57e-12!436;CL:0002320!4.00e-12!365;CL:0000034!1.05e-11!444;CL:0000134!1.63e-11!358;CL:0000037!4.41e-09!172;CL:0000566!4.41e-09!172;CL:0000219!1.18e-08!390;CL:0000988!1.67e-08!182;CL:0000945!2.68e-08!24;CL:0000826!2.68e-08!24;CL:0002032!5.33e-08!165;CL:0000837!5.33e-08!165;CL:0002371!3.43e-07!591;CL:0000236!6.41e-07!14|ontology_enrichment_celltype_v019=CL:0000860;2.24e-29;33!CL:0002057;2.24e-29;33!CL:0000473;4.44e-23;39!CL:0000234;4.44e-23;39!CL:0000236;2.95e-15;13!CL:0000576;7.40e-13;48!CL:0000766;1.94e-09;69!CL:0000945;2.09e-09;24|ontology_enrichment_celltype_v019_2=CL:0000473,4.86e-25,48;CL:0000234,4.86e-25,48;CL:0000860,3.70e-24,42;CL:0002057,3.70e-24,42;CL:0002194,3.95e-23,59;CL:0000576,3.95e-23,59;CL:0000040,3.95e-23,59;CL:0000559,3.95e-23,59;CL:0002009,3.58e-22,61;CL:0002087,4.75e-22,115;CL:0002031,9.21e-21,120;CL:0000839,4.96e-20,66;CL:0000738,6.71e-20,136;CL:0000557,1.22e-19,67;CL:0000766,1.61e-19,72;CL:0000037,2.32e-14,168;CL:0002032,2.92e-14,161;CL:0000837,2.92e-14,161;CL:0000236,4.21e-14,14;CL:0000988,3.58e-13,177;CL:0002320,2.21e-12,361;CL:0000134,4.38e-12,354;CL:0000048,4.26e-11,427;CL:0000763,6.18e-11,108;CL:0000049,6.18e-11,108;CL:0000723,9.34e-11,433;CL:0000034,2.57e-10,441;CL:0000219,6.28e-10,386;CL:0000945,2.33e-09,24;CL:0000826,2.33e-09,24|ontology_enrichment_development_v019=CL:0002057;2.04e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.31e-15!80;UBERON:0002390!1.08e-14!102;UBERON:0003061!1.08e-14!102;UBERON:0002193!2.88e-14!112;UBERON:0001474!1.46e-13!86;UBERON:0004765!1.32e-11!101;UBERON:0001434!1.32e-11!101;UBERON:0002204!8.65e-11!167;UBERON:0002384!1.08e-10!375;UBERON:0002405!5.44e-10!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.11e-18,76;UBERON:0001474,8.58e-18,82;UBERON:0004765,4.02e-17,90;UBERON:0001434,4.07e-16,100;UBERON:0002405,6.18e-15,93;UBERON:0002390,7.66e-14,98;UBERON:0003061,7.66e-14,98;UBERON:0002193,5.75e-12,108;UBERON:0002204,7.57e-12,167;UBERON:0002384,1.05e-11,371;UBERON:0003081,1.50e-07,203;UBERON:0000926,7.52e-07,315;UBERON:0004120,7.52e-07,315;UBERON:0006603,7.52e-07,315|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0.247532705920093,1.65698687863958,0,0,1.46062018077475,0,0,0.204000691244253,0,0.286235987131057,0,0,0.916960868975415,0.656804715599566,1.10195093839151,1.18009283054671,0,0.154816123316076,0,0,0,0,0,0.587200878669695,0,0.601633342410425,0.434021741431704,0.671746422719773,0.971680998056939,0.515151135268373,0,0,0,0.697287110717054,1.6446715520873,1.54853185447552,2.8769239232215,0.768482119587302,1.41889337933151,1.72372840368309,1.29096936716765,1.35426486594342,0.376484679085209,0.818718450173537,2.47195832889593,1.22433556948361,1.60464513538047,1.27867425159808,0.989553900560148,1.39624560335142,0.426224750532694,0.870627715885752,2.8369261234557,2.4912889959823,2.51248665256743,2.60741459210101,1.52032191293582,2.42159801053347,2.57794345191295,2.84816148696796,0.633765858935825,0.212604299965044,0.209658645508376,0.336985893439485,0.901061357049038,0.32145117339416,0,0.59675003159727,0.182664153764634,0,3.82297027883492,2.66852776159066,4.69403244823158,6.00593980554019,2.87376219977242,3.30522436392431,2.86216126360609,2.27685187643779,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.334231370655521,0,0.443067789167242,0.270803863765016,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0.566546713487831,0,0,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0,1.24930726552346,0.473554504088034,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0.472674085820339,0.221729397462564,0.263504357079378,0.261958150995425,0,0,2.59637914923747,0.696518949197069,0.26591592103773,2.62339686735876,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0.573673241497627,0.354668382198357,1.12135520028461,0,0,0.311211035399766,0,0,0,0,0,1.24864030732128,0,0.448346041655403,0,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,1.18800285728205,1.23633464639278,0,0,0,0,0,0,0,0.6009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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17260 | |||
|TSSclassifier=S | |||
|UniProt=O95379 | |||
|association_with_transcript=0bp_to_NM_014350,uc003ksi.2_5end | |||
|description=CAGE_peak_14_at_TNFAIP8_5end | |||
|id=chr5:118691590..118691601,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.78e-19!63;CL:0000576!1.78e-19!63;CL:0000040!1.78e-19!63;CL:0000559!1.78e-19!63;CL:0002009!7.27e-19!65;CL:0002087!2.89e-18!119;CL:0002057!3.38e-16!42;CL:0000557!2.49e-15!71;CL:0000839!3.02e-15!70;CL:0000860!4.12e-15!45;CL:0000738!7.02e-15!140;CL:0002031!2.72e-14!124;CL:0000766!8.98e-14!76;CL:0000048!3.71e-13!430;CL:0000723!1.57e-12!436;CL:0002320!4.00e-12!365;CL:0000034!1.05e-11!444;CL:0000134!1.63e-11!358;CL:0000037!4.41e-09!172;CL:0000566!4.41e-09!172;CL:0000219!1.18e-08!390;CL:0000988!1.67e-08!182;CL:0000945!2.68e-08!24;CL:0000826!2.68e-08!24;CL:0002032!5.33e-08!165;CL:0000837!5.33e-08!165;CL:0002371!3.43e-07!591;CL:0000236!6.41e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.24e-29;33!CL:0002057;2.24e-29;33!CL:0000473;4.44e-23;39!CL:0000234;4.44e-23;39!CL:0000236;2.95e-15;13!CL:0000576;7.40e-13;48!CL:0000766;1.94e-09;69!CL:0000945;2.09e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.86e-25,48;CL:0000234,4.86e-25,48;CL:0000860,3.70e-24,42;CL:0002057,3.70e-24,42;CL:0002194,3.95e-23,59;CL:0000576,3.95e-23,59;CL:0000040,3.95e-23,59;CL:0000559,3.95e-23,59;CL:0002009,3.58e-22,61;CL:0002087,4.75e-22,115;CL:0002031,9.21e-21,120;CL:0000839,4.96e-20,66;CL:0000738,6.71e-20,136;CL:0000557,1.22e-19,67;CL:0000766,1.61e-19,72;CL:0000037,2.32e-14,168;CL:0002032,2.92e-14,161;CL:0000837,2.92e-14,161;CL:0000236,4.21e-14,14;CL:0000988,3.58e-13,177;CL:0002320,2.21e-12,361;CL:0000134,4.38e-12,354;CL:0000048,4.26e-11,427;CL:0000763,6.18e-11,108;CL:0000049,6.18e-11,108;CL:0000723,9.34e-11,433;CL:0000034,2.57e-10,441;CL:0000219,6.28e-10,386;CL:0000945,2.33e-09,24;CL:0000826,2.33e-09,24 | |||
|ontology_enrichment_development_v019=CL:0002057;2.04e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.31e-15!80;UBERON:0002390!1.08e-14!102;UBERON:0003061!1.08e-14!102;UBERON:0002193!2.88e-14!112;UBERON:0001474!1.46e-13!86;UBERON:0004765!1.32e-11!101;UBERON:0001434!1.32e-11!101;UBERON:0002204!8.65e-11!167;UBERON:0002384!1.08e-10!375;UBERON:0002405!5.44e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.11e-18,76;UBERON:0001474,8.58e-18,82;UBERON:0004765,4.02e-17,90;UBERON:0001434,4.07e-16,100;UBERON:0002405,6.18e-15,93;UBERON:0002390,7.66e-14,98;UBERON:0003061,7.66e-14,98;UBERON:0002193,5.75e-12,108;UBERON:0002204,7.57e-12,167;UBERON:0002384,1.05e-11,371;UBERON:0003081,1.50e-07,203;UBERON:0000926,7.52e-07,315;UBERON:0004120,7.52e-07,315;UBERON:0006603,7.52e-07,315 | |||
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| |||
|short_description=p14@TNFAIP8 | |||
}} |
Revision as of 12:48, 13 September 2013
Short description: | p14@TNFAIP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_TNFAIP8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_014350, uc003ksi.2_5end |
EntrezGene: | TNFAIP8 |
HGNC: | 17260 |
UniProt: | O95379 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.86e-25 | 48 |
phagocyte | 4.86e-25 | 48 |
classical monocyte | 3.70e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.70e-24 | 42 |
monopoietic cell | 3.95e-23 | 59 |
monocyte | 3.95e-23 | 59 |
monoblast | 3.95e-23 | 59 |
promonocyte | 3.95e-23 | 59 |
macrophage dendritic cell progenitor | 3.58e-22 | 61 |
nongranular leukocyte | 4.75e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 9.21e-21 | 120 |
myeloid lineage restricted progenitor cell | 4.96e-20 | 66 |
leukocyte | 6.71e-20 | 136 |
granulocyte monocyte progenitor cell | 1.22e-19 | 67 |
myeloid leukocyte | 1.61e-19 | 72 |
hematopoietic stem cell | 2.32e-14 | 168 |
hematopoietic oligopotent progenitor cell | 2.92e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.92e-14 | 161 |
B cell | 4.21e-14 | 14 |
hematopoietic cell | 3.58e-13 | 177 |
connective tissue cell | 2.21e-12 | 361 |
mesenchymal cell | 4.38e-12 | 354 |
multi fate stem cell | 4.26e-11 | 427 |
myeloid cell | 6.18e-11 | 108 |
common myeloid progenitor | 6.18e-11 | 108 |
somatic stem cell | 9.34e-11 | 433 |
stem cell | 2.57e-10 | 441 |
motile cell | 6.28e-10 | 386 |
lymphocyte of B lineage | 2.33e-09 | 24 |
pro-B cell | 2.33e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.11e-18 | 76 |
bone element | 8.58e-18 | 82 |
skeletal element | 4.02e-17 | 90 |
skeletal system | 4.07e-16 | 100 |
immune system | 6.18e-15 | 93 |
hematopoietic system | 7.66e-14 | 98 |
blood island | 7.66e-14 | 98 |
hemolymphoid system | 5.75e-12 | 108 |
musculoskeletal system | 7.57e-12 | 167 |
connective tissue | 1.05e-11 | 371 |
lateral plate mesoderm | 1.50e-07 | 203 |
mesoderm | 7.52e-07 | 315 |
mesoderm-derived structure | 7.52e-07 | 315 |
presumptive mesoderm | 7.52e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.