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FFCP PHASE1:Mm9::chr16:44558890..44558912,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=117606|HGNC=|UniProt=Q6AZB0|association_with_transcript=70bp_to_ENSMUST00000023370,NM_172506,uc007zhl.1,uc007zhm.1,uc007zhn.1_5end|description=CAGE_peak_4_at_Boc_5end|id=chr16:44558890..44558912,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,4.77e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!5.18e-12!94;UBERON:0004121!1.71e-11!102;UBERON:0000924!1.71e-11!102;UBERON:0006601!1.71e-11!102;UBERON:0000033!4.67e-11!63;UBERON:0002346!1.56e-10!71;UBERON:0003075!1.56e-10!71;UBERON:0007284!1.56e-10!71;UBERON:0007811!6.55e-10!86;UBERON:0000956!1.15e-09!21;UBERON:0001869!1.15e-09!21;UBERON:0000203!1.15e-09!21;UBERON:0001049!1.32e-09!52;UBERON:0005068!1.32e-09!52;UBERON:0006241!1.32e-09!52;UBERON:0007135!1.32e-09!52;UBERON:0003056!3.37e-09!49;UBERON:0001017!4.81e-08!73;UBERON:0005743!4.81e-08!73;UBERON:0002020!4.91e-08!34;UBERON:0002616!8.26e-08!49;UBERON:0000073!1.90e-07!75;UBERON:0001016!1.90e-07!75;UBERON:0000955!2.63e-07!50;UBERON:0006238!2.63e-07!50;UBERON:0002619!2.82e-07!17;UBERON:0000468!2.86e-07!333;UBERON:0002791!3.22e-07!29;UBERON:0003528!3.22e-07!29;UBERON:0001893!3.22e-07!29;UBERON:0002780!6.46e-07!39;UBERON:0001890!6.46e-07!39;UBERON:0006240!6.46e-07!39;UBERON:0003080!8.09e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.55e-13,21;UBERON:0001869,5.55e-13,21;UBERON:0000203,5.55e-13,21;UBERON:0002619,1.89e-08,17;UBERON:0003528,3.03e-08,29;UBERON:0002791,3.03e-08,29;UBERON:0001893,3.03e-08,29;UBERON:0002020,1.71e-07,34|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,1.00717454380462,0.608261587317087,0.367093504323363,0.782391344348039,1.96222640742402,2.19686182734472,3.88859798148567,0.55994568650145,7.18762821824858,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,1.41621522601718,2.11596391708813,0.633831403506179,0,0.889294796111139,0,0,0,0.898800331555214,1.53687322128622,7.98410014775278,6.75029691658453,5.67877395648731,0.856952953211411,0.662605622854841,1.71487118900936,1.91690942036473,0.919218786610021,0,0.127687338085188,0.307213066512487,0.923204014111357,0.182975287204819,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0.569486723196412,1.4911955666024,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,1.26759077799012,0,0,0,0,0.253359865475099,0,0.22836775943812,0,1.03909497345377,0.520455980298408,0,0.461230994512117,0.150722640552623,0.470354828542819,0.376999773989026,0.247194967734374,0.144599356919912,0,1.13236794963186,0.441683036920787,0,0,4.09893115816166,2.51336048176146,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,1.04294592115366,0.767146371990992,0.20778804455956,0,1.12023300235348,0.373220911830279,0.252722758433675,1.68353484709179,1.30120442962704,0.919608417733892,0.360124259610698,0.753524089178575,0.816437989815934,0.768682321709099,0.749613796477831,1.29351685369508,1.07783996466421,1.32374256117473,0.703804496655795,1.09597866213787,3.05851974148158,1.0447564995665,1.23469281844766,0.995171334092466,0,0,0,0.414251545071004,0.469052119962192,0,0.473489471170421,0.393528463494808,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0.420579897128254,0.92614151141356,0,0,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.799739588268102,0,1.4255592949172,0.387904974335251,0.350679099451593,0.189709611372772,0.147610147979602,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.32643988239339,0.162964976442026,1.18821560042632,0.234690248288502,0.670025029767263,0.476087281772027,1.75620283072019,0.630540576424764,0.8858587585951,0.797273843287435,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,1.10374698521893,0.642202359951168,0.468846746368813,0.327869890753351,0.757412781613119,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0,0.141940085208269,0.35613120733451,1.62886959353576,0.659880491890142,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0,0,1.58018378967908,0,0,0.340439605753788,0.540183282093931,0.905510786479282,0.214337035031592,0.709360934569094,0.891844088010353,0.329098041204242,0.608929898229199,0.469343416127421,0,0.220528398054962,0.32977250588296,2.09903754704677,0.603129249281559,0.716234064018819,0.492422699235184,0.874442509889552,0.370850604021019,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.627264888043406,1.31017538247707,1.34864346384821,1.23980183588004,1.83229159388821,0.518459893167171,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.506868376472335,0.234714477291508,0.2604087696879,0.419437377702843,0,0,0,2.8381530140623,2.56777392912068,1.03936658382236,2.50637373934474,0.39736270956253,0.600977247599844,0.590758108698309,0.605798699688886,0.762068066549998,0.907435666231565,0.877120926657772,1.05833025804362,1.16876902181569,3.62768613784338,0,0,0,2.12508553435409,1.31377732815827,0.183151624267265,0.428736758158132,0,1.12950368523413,0,2.29158205375759,2.57779773515531,0.685082519770642,1.5107877947794,1.35004500046361,0.900642406448441,1.35942722695261,1.55328093525546,1.03787347584177,1.59609949360412,2.73173769206615,1.70174701947806,0.838452650511929,0.183843508450014,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,0.760437899670719,0.754505365544305,0.468207537349412,0.256100609619477,0.746661096422973,0.476293691283074,0.579421629724277,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.290692833264657,1.03520318456864,0.507687647350059,0.73171189149109,0.789209134313529,0.271608227691724,0,0.593175090620871,0.394017929502254,0,0.464810523557898,0.578719832943424,1.24905288968973,0.233931608445408,1.28922632428979,1.91288332068843,0.441182838239031,1.39120701372253|short_description=p4@Boc}}
|EntrezGene=117606
|HGNC=
|UniProt=Q6AZB0
|association_with_transcript=70bp_to_ENSMUST00000023370,NM_172506,uc007zhl.1,uc007zhm.1,uc007zhn.1_5end
|description=CAGE_peak_4_at_Boc_5end
|id=chr16:44558890..44558912,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002609,4.77e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!5.18e-12!94;UBERON:0004121!1.71e-11!102;UBERON:0000924!1.71e-11!102;UBERON:0006601!1.71e-11!102;UBERON:0000033!4.67e-11!63;UBERON:0002346!1.56e-10!71;UBERON:0003075!1.56e-10!71;UBERON:0007284!1.56e-10!71;UBERON:0007811!6.55e-10!86;UBERON:0000956!1.15e-09!21;UBERON:0001869!1.15e-09!21;UBERON:0000203!1.15e-09!21;UBERON:0001049!1.32e-09!52;UBERON:0005068!1.32e-09!52;UBERON:0006241!1.32e-09!52;UBERON:0007135!1.32e-09!52;UBERON:0003056!3.37e-09!49;UBERON:0001017!4.81e-08!73;UBERON:0005743!4.81e-08!73;UBERON:0002020!4.91e-08!34;UBERON:0002616!8.26e-08!49;UBERON:0000073!1.90e-07!75;UBERON:0001016!1.90e-07!75;UBERON:0000955!2.63e-07!50;UBERON:0006238!2.63e-07!50;UBERON:0002619!2.82e-07!17;UBERON:0000468!2.86e-07!333;UBERON:0002791!3.22e-07!29;UBERON:0003528!3.22e-07!29;UBERON:0001893!3.22e-07!29;UBERON:0002780!6.46e-07!39;UBERON:0001890!6.46e-07!39;UBERON:0006240!6.46e-07!39;UBERON:0003080!8.09e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.55e-13,21;UBERON:0001869,5.55e-13,21;UBERON:0000203,5.55e-13,21;UBERON:0002619,1.89e-08,17;UBERON:0003528,3.03e-08,29;UBERON:0002791,3.03e-08,29;UBERON:0001893,3.03e-08,29;UBERON:0002020,1.71e-07,34
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,1.00717454380462,0.608261587317087,0.367093504323363,0.782391344348039,1.96222640742402,2.19686182734472,3.88859798148567,0.55994568650145,7.18762821824858,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,1.41621522601718,2.11596391708813,0.633831403506179,0,0.889294796111139,0,0,0,0.898800331555214,1.53687322128622,7.98410014775278,6.75029691658453,5.67877395648731,0.856952953211411,0.662605622854841,1.71487118900936,1.91690942036473,0.919218786610021,0,0.127687338085188,0.307213066512487,0.923204014111357,0.182975287204819,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0.569486723196412,1.4911955666024,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,1.26759077799012,0,0,0,0,0.253359865475099,0,0.22836775943812,0,1.03909497345377,0.520455980298408,0,0.461230994512117,0.150722640552623,0.470354828542819,0.376999773989026,0.247194967734374,0.144599356919912,0,1.13236794963186,0.441683036920787,0,0,4.09893115816166,2.51336048176146,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,1.04294592115366,0.767146371990992,0.20778804455956,0,1.12023300235348,0.373220911830279,0.252722758433675,1.68353484709179,1.30120442962704,0.919608417733892,0.360124259610698,0.753524089178575,0.816437989815934,0.768682321709099,0.749613796477831,1.29351685369508,1.07783996466421,1.32374256117473,0.703804496655795,1.09597866213787,3.05851974148158,1.0447564995665,1.23469281844766,0.995171334092466,0,0,0,0.414251545071004,0.469052119962192,0,0.473489471170421,0.393528463494808,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0.420579897128254,0.92614151141356,0,0,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.799739588268102,0,1.4255592949172,0.387904974335251,0.350679099451593,0.189709611372772,0.147610147979602,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.32643988239339,0.162964976442026,1.18821560042632,0.234690248288502,0.670025029767263,0.476087281772027,1.75620283072019,0.630540576424764,0.8858587585951,0.797273843287435,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,1.10374698521893,0.642202359951168,0.468846746368813,0.327869890753351,0.757412781613119,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0,0.141940085208269,0.35613120733451,1.62886959353576,0.659880491890142,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0,0,1.58018378967908,0,0,0.340439605753788,0.540183282093931,0.905510786479282,0.214337035031592,0.709360934569094,0.891844088010353,0.329098041204242,0.608929898229199,0.469343416127421,0,0.220528398054962,0.32977250588296,2.09903754704677,0.603129249281559,0.716234064018819,0.492422699235184,0.874442509889552,0.370850604021019,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.627264888043406,1.31017538247707,1.34864346384821,1.23980183588004,1.83229159388821,0.518459893167171,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.506868376472335,0.234714477291508,0.2604087696879,0.419437377702843,0,0,0,2.8381530140623,2.56777392912068,1.03936658382236,2.50637373934474,0.39736270956253,0.600977247599844,0.590758108698309,0.605798699688886,0.762068066549998,0.907435666231565,0.877120926657772,1.05833025804362,1.16876902181569,3.62768613784338,0,0,0,2.12508553435409,1.31377732815827,0.183151624267265,0.428736758158132,0,1.12950368523413,0,2.29158205375759,2.57779773515531,0.685082519770642,1.5107877947794,1.35004500046361,0.900642406448441,1.35942722695261,1.55328093525546,1.03787347584177,1.59609949360412,2.73173769206615,1.70174701947806,0.838452650511929,0.183843508450014,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,0.760437899670719,0.754505365544305,0.468207537349412,0.256100609619477,0.746661096422973,0.476293691283074,0.579421629724277,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.290692833264657,1.03520318456864,0.507687647350059,0.73171189149109,0.789209134313529,0.271608227691724,0,0.593175090620871,0.394017929502254,0,0.464810523557898,0.578719832943424,1.24905288968973,0.233931608445408,1.28922632428979,1.91288332068843,0.441182838239031,1.39120701372253
|short_description=p4@Boc
}}

Revision as of 12:44, 13 September 2013

Short description:p4@Boc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Boc_5end
Coexpression cluster:NA
Association with transcript: 70bp_to_ENSMUST00000023370, NM_172506, uc007zhl.1, uc007zhm.1, uc007zhn.1_5end
EntrezGene:Boc
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p4@Boc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of cerebral cortex4.77e-076

Uber anatomy
Ontology termp-valuen
cerebral cortex5.55e-1321
cerebral hemisphere5.55e-1321
pallium5.55e-1321
regional part of cerebral cortex1.89e-0817
brain grey matter3.03e-0829
regional part of telencephalon3.03e-0829
telencephalon3.03e-0829
gray matter1.71e-0734







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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