FFCP PHASE1:Mm9::chr16:38902418..38902429,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=207683|HGNC=|MCL_coexpression_id=176|UniProt=P0C673|association_with_transcript=0bp_to_ENSMUST00000023478_5end|description=CAGE_peak_5_at_Igsf11_5end|id=chr16:38902418..38902429,+|ontology_enrichment_celltype=CL:0000221!1.45e-17!44;CL:0000133!1.45e-17!44;CL:0002319!8.67e-17!43;CL:0000055!8.43e-14!50;CL:0000540!5.78e-10!33;CL:0000047!5.78e-10!33;CL:0000031!5.78e-10!33;CL:0000404!5.78e-10!33;CL:0000333!1.03e-08!10;CL:0000095!1.03e-08!10;CL:0000243!1.03e-08!10;CL:0000123!1.03e-08!10;CL:0000125!1.03e-08!10;CL:0000030!1.03e-08!10;CL:0000339!1.03e-08!10;CL:0002321!2.07e-08!70;CL:0000220!2.07e-08!70;CL:0000393!3.53e-07!39;CL:0000211!3.53e-07!39;CL:0000117!5.19e-07!23;CL:0000337!5.19e-07!23;CL:0002453!6.30e-07!8|ontology_enrichment_celltype_v019_2=CL:0000333,1.01e-33,10;CL:0000095,1.01e-33,10;CL:0000243,1.01e-33,10;CL:0000123,1.01e-33,10;CL:0000125,1.01e-33,10;CL:0000030,1.01e-33,10;CL:0000339,1.01e-33,10;CL:0002453,4.12e-26,8;CL:0000128,5.20e-18,6;CL:0000126,5.20e-18,6;CL:0000127,5.20e-18,6;CL:0002319,9.49e-17,43;CL:0000221,2.59e-16,44;CL:0000133,2.59e-16,44;CL:0000878,6.33e-10,2;CL:0000129,6.33e-10,2;CL:0002605,1.52e-09,2;CL:0002604,1.52e-09,2;CL:0002321,2.52e-09,70;CL:0000217,3.24e-09,2;CL:0000328,3.24e-09,2;CL:0002573,3.24e-09,2;CL:0002376,3.24e-09,2;CL:0000218,3.24e-09,2;CL:0000692,3.24e-09,2;CL:0002377,3.24e-09,2;CL:0002611,3.24e-09,2;CL:0002375,3.24e-09,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!7.06e-18!102;UBERON:0000924!7.06e-18!102;UBERON:0006601!7.06e-18!102;UBERON:0000073!5.66e-16!75;UBERON:0001016!5.66e-16!75;UBERON:0001017!1.68e-14!73;UBERON:0005743!1.68e-14!73;UBERON:0002346!5.53e-12!71;UBERON:0003075!5.53e-12!71;UBERON:0007284!5.53e-12!71;UBERON:0002020!5.67e-09!34;UBERON:0000033!3.85e-08!63;UBERON:0002791!4.25e-08!29;UBERON:0003528!4.25e-08!29;UBERON:0001893!4.25e-08!29;UBERON:0001049!5.06e-07!52;UBERON:0005068!5.06e-07!52;UBERON:0006241!5.06e-07!52;UBERON:0007135!5.06e-07!52;UBERON:0000955!9.35e-07!50;UBERON:0006238!9.35e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.83e-11,75;UBERON:0004121,1.10e-09,95;UBERON:0000924,1.10e-09,95;UBERON:0006601,1.10e-09,95;UBERON:0002256,3.24e-09,2;UBERON:0001017,9.47e-09,73|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,5.45062890951116,4.83309602015838,2.3331587888914,2.51975558925653,10.062679505548,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,6.5912024314049,13.4476406862544,0.207379224616955,0.405017814995072,0.210324961351382,2.57085885963423,1.32521124570968,0.122490799214954,0.191690942036473,0,0,0.893811366596314,0.46081959976873,0.131886287730194,0.182975287204819,0.52091337055676,1.95428099300967,0.56276261003168,1.06958773443767,0,0.427115042397309,0,2.27178579999552,1.43585964202892,0,0.860423876981386,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0.506719730950197,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0.608930956624282,0.230615497256059,0.60289056221049,0.352766121407114,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0.753926112677186,0.695297280769106,0.511430914660661,0.20778804455956,0.324482526135515,0,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0.476255494059295,0.2562274405697,1.03071897015702,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0.502670417600539,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.561086559122548,1.20149420536089,1.18088118383682,0.156998727841375,0.740382983530803,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0.505157755894224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937693492737625,0,0,0.315508219416257,0.390438744296638,0.430846795465598,1.19484398976276,0.222798674082394,0,0.809621403349789,0.876767573733936,0,0.642642632843614,0.425820255624806,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0,0.632073515871632,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,2.25477175473676,0,0,0.388902376688095,0.129159823477731,0,0.234714477291508,0.911430693907651,0.629156066554265,0.966336483304024,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.343706364687375,0,0,1.35004500046361,0,0,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p5@Igsf11}} | ||
|EntrezGene=207683 | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|UniProt=P0C673 | |||
|association_with_transcript=0bp_to_ENSMUST00000023478_5end | |||
|description=CAGE_peak_5_at_Igsf11_5end | |||
|id=chr16:38902418..38902429,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.45e-17!44;CL:0000133!1.45e-17!44;CL:0002319!8.67e-17!43;CL:0000055!8.43e-14!50;CL:0000540!5.78e-10!33;CL:0000047!5.78e-10!33;CL:0000031!5.78e-10!33;CL:0000404!5.78e-10!33;CL:0000333!1.03e-08!10;CL:0000095!1.03e-08!10;CL:0000243!1.03e-08!10;CL:0000123!1.03e-08!10;CL:0000125!1.03e-08!10;CL:0000030!1.03e-08!10;CL:0000339!1.03e-08!10;CL:0002321!2.07e-08!70;CL:0000220!2.07e-08!70;CL:0000393!3.53e-07!39;CL:0000211!3.53e-07!39;CL:0000117!5.19e-07!23;CL:0000337!5.19e-07!23;CL:0002453!6.30e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.01e-33,10;CL:0000095,1.01e-33,10;CL:0000243,1.01e-33,10;CL:0000123,1.01e-33,10;CL:0000125,1.01e-33,10;CL:0000030,1.01e-33,10;CL:0000339,1.01e-33,10;CL:0002453,4.12e-26,8;CL:0000128,5.20e-18,6;CL:0000126,5.20e-18,6;CL:0000127,5.20e-18,6;CL:0002319,9.49e-17,43;CL:0000221,2.59e-16,44;CL:0000133,2.59e-16,44;CL:0000878,6.33e-10,2;CL:0000129,6.33e-10,2;CL:0002605,1.52e-09,2;CL:0002604,1.52e-09,2;CL:0002321,2.52e-09,70;CL:0000217,3.24e-09,2;CL:0000328,3.24e-09,2;CL:0002573,3.24e-09,2;CL:0002376,3.24e-09,2;CL:0000218,3.24e-09,2;CL:0000692,3.24e-09,2;CL:0002377,3.24e-09,2;CL:0002611,3.24e-09,2;CL:0002375,3.24e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.06e-18!102;UBERON:0000924!7.06e-18!102;UBERON:0006601!7.06e-18!102;UBERON:0000073!5.66e-16!75;UBERON:0001016!5.66e-16!75;UBERON:0001017!1.68e-14!73;UBERON:0005743!1.68e-14!73;UBERON:0002346!5.53e-12!71;UBERON:0003075!5.53e-12!71;UBERON:0007284!5.53e-12!71;UBERON:0002020!5.67e-09!34;UBERON:0000033!3.85e-08!63;UBERON:0002791!4.25e-08!29;UBERON:0003528!4.25e-08!29;UBERON:0001893!4.25e-08!29;UBERON:0001049!5.06e-07!52;UBERON:0005068!5.06e-07!52;UBERON:0006241!5.06e-07!52;UBERON:0007135!5.06e-07!52;UBERON:0000955!9.35e-07!50;UBERON:0006238!9.35e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.83e-11,75;UBERON:0004121,1.10e-09,95;UBERON:0000924,1.10e-09,95;UBERON:0006601,1.10e-09,95;UBERON:0002256,3.24e-09,2;UBERON:0001017,9.47e-09,73 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,5.45062890951116,4.83309602015838,2.3331587888914,2.51975558925653,10.062679505548,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,6.5912024314049,13.4476406862544,0.207379224616955,0.405017814995072,0.210324961351382,2.57085885963423,1.32521124570968,0.122490799214954,0.191690942036473,0,0,0.893811366596314,0.46081959976873,0.131886287730194,0.182975287204819,0.52091337055676,1.95428099300967,0.56276261003168,1.06958773443767,0,0.427115042397309,0,2.27178579999552,1.43585964202892,0,0.860423876981386,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0.506719730950197,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0.608930956624282,0.230615497256059,0.60289056221049,0.352766121407114,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0.753926112677186,0.695297280769106,0.511430914660661,0.20778804455956,0.324482526135515,0,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0.476255494059295,0.2562274405697,1.03071897015702,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0.502670417600539,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.561086559122548,1.20149420536089,1.18088118383682,0.156998727841375,0.740382983530803,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0.505157755894224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937693492737625,0,0,0.315508219416257,0.390438744296638,0.430846795465598,1.19484398976276,0.222798674082394,0,0.809621403349789,0.876767573733936,0,0.642642632843614,0.425820255624806,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0,0.632073515871632,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,2.25477175473676,0,0,0.388902376688095,0.129159823477731,0,0.234714477291508,0.911430693907651,0.629156066554265,0.966336483304024,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.343706364687375,0,0,1.35004500046361,0,0,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p5@Igsf11 | |||
}} |
Revision as of 12:39, 13 September 2013
Short description: | p5@Igsf11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Igsf11_5end |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | 0bp_to_ENSMUST00000023478_5end |
EntrezGene: | Igsf11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.01e-33 | 10 |
neuron associated cell | 1.01e-33 | 10 |
glial cell (sensu Vertebrata) | 1.01e-33 | 10 |
neuron associated cell (sensu Vertebrata) | 1.01e-33 | 10 |
glial cell | 1.01e-33 | 10 |
glioblast | 1.01e-33 | 10 |
glioblast (sensu Vertebrata) | 1.01e-33 | 10 |
oligodendrocyte precursor cell | 4.12e-26 | 8 |
oligodendrocyte | 5.20e-18 | 6 |
macroglial cell | 5.20e-18 | 6 |
astrocyte | 5.20e-18 | 6 |
neural cell | 9.49e-17 | 43 |
ectodermal cell | 2.59e-16 | 44 |
neurectodermal cell | 2.59e-16 | 44 |
central nervous system macrophage | 6.33e-10 | 2 |
microglial cell | 6.33e-10 | 2 |
astrocyte of the cerebral cortex | 1.52e-09 | 2 |
astrocyte of the hippocampus | 1.52e-09 | 2 |
embryonic cell | 2.52e-09 | 70 |
insulating cell | 3.24e-09 | 2 |
myelin accumulating cell | 3.24e-09 | 2 |
Schwann cell | 3.24e-09 | 2 |
non-myelinating Schwann cell | 3.24e-09 | 2 |
myelinating Schwann cell;;Schwann cell | 3.24e-09 | 2 |
terminal Schwann cell | 3.24e-09 | 2 |
immature Schwann cell | 3.24e-09 | 2 |
neuron of the dorsal spinal cord | 3.24e-09 | 2 |
Schwann cell precursor | 3.24e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.83e-11 | 75 |
ectoderm-derived structure | 1.10e-09 | 95 |
ectoderm | 1.10e-09 | 95 |
presumptive ectoderm | 1.10e-09 | 95 |
dorsal horn of spinal cord | 3.24e-09 | 2 |
central nervous system | 9.47e-09 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.