FFCP PHASE1:Mm9::chr16:37868270..37868289,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=320184|HGNC=|MCL_coexpression_id=99|UniProt=Q3UGP9,Q8BTI3|association_with_transcript=-185bp_to_ENSMUST00000078717,ENSMUST00000171099_5end|description=CAGE_peak_3_at_Lrrc58_5end|id=chr16:37868270..37868289,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!2.26e-17!79;UBERON:0005177!1.32e-15!85;UBERON:0002100!6.63e-13!98;UBERON:0009569!3.01e-12!66;UBERON:0005172!1.36e-10!49;UBERON:0005173!1.36e-10!49;UBERON:0002417!1.36e-10!49;UBERON:0000916!1.36e-10!49;UBERON:0002323!1.28e-09!37;UBERON:0004458!1.28e-09!37;UBERON:0002107!2.07e-09!22;UBERON:0007499!2.07e-09!22;UBERON:0006925!2.07e-09!22;UBERON:0009497!2.07e-09!22;UBERON:0000015!2.07e-09!22;UBERON:0002423!2.07e-09!22;UBERON:0006235!2.07e-09!22;UBERON:0008835!2.07e-09!22;UBERON:0003894!2.07e-09!22;UBERON:0004161!2.07e-09!22;UBERON:0008836!2.07e-09!22;UBERON:0009854!4.48e-09!23;UBERON:0009856!4.48e-09!23;UBERON:0000464!5.53e-09!57;UBERON:0003886!6.14e-09!38;UBERON:0002365!6.68e-09!25;UBERON:0002330!6.68e-09!25;UBERON:0002553!3.98e-08!39;UBERON:0005256!6.16e-08!47;UBERON:0003914!2.32e-07!47;UBERON:0001048!3.06e-07!147;UBERON:0001264!4.00e-07!12;UBERON:0003922!4.00e-07!12;UBERON:0002114!4.00e-07!12;UBERON:0003923!4.00e-07!12;UBERON:0003924!4.00e-07!12;UBERON:0003921!4.00e-07!12;UBERON:0005157!7.03e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.24e-18,79;UBERON:0002100,4.16e-16,90;UBERON:0009569,1.19e-12,66;UBERON:0005172,1.01e-10,49;UBERON:0005173,1.01e-10,49;UBERON:0002417,1.01e-10,49;UBERON:0000916,1.01e-10,49;UBERON:0002323,1.06e-09,37;UBERON:0004458,1.06e-09,37;UBERON:0002107,1.29e-09,22;UBERON:0007499,1.29e-09,22;UBERON:0006925,1.29e-09,22;UBERON:0009497,1.29e-09,22;UBERON:0000015,1.29e-09,22;UBERON:0002423,1.29e-09,22;UBERON:0006235,1.29e-09,22;UBERON:0008835,1.29e-09,22;UBERON:0003894,1.29e-09,22;UBERON:0004161,1.29e-09,22;UBERON:0008836,1.29e-09,22;UBERON:0002365,2.79e-09,25;UBERON:0002330,2.79e-09,25;UBERON:0009854,2.84e-09,23;UBERON:0009856,2.84e-09,23;UBERON:0005256,5.07e-09,45;UBERON:0003886,5.72e-09,38;UBERON:0002553,2.74e-08,39;UBERON:0003104,1.66e-07,61;UBERON:0009142,1.66e-07,61;UBERON:0003914,1.80e-07,47;UBERON:0001264,2.85e-07,12|phase1_expression=1.44133962394315,0,0,0,0,1.17515490338323,0.934450562382103,0.774739940649458,6.89864738543167,7.72412936862578,0,0.159544317990673,0.342401459862411,0,0,0.202475267389826,0,0,0,0,2.55129870453209,0.496454756004426,0.261199789138935,0.47997726838022,0,0,0,0.430942465371778,0,0.252030129759931,0,0,0,0,1.1554064790051,0.997407872150954,1.22501613757421,0,0,0,0,0,0,1.76255545165808,2.63580021170738,2.20256102594018,19.559783608701,2.18025156380447,2.85592037554813,1.94429899074283,8.25919887589639,2.87505128729943,0.335565212115473,0,1.00828139742739,12.0911934936895,2.29226751951005,9.28209766099396,0.809265843438391,1.05798195854407,1.26766280701236,2.37191172448392,9.78224275722253,0.449949858640699,0.988866362566974,0.7104801149461,1.19840044207362,2.68952813725088,1.76272340924412,1.21505344498522,2.73422449756797,0.285650984403804,1.10434270475807,0.979926393719632,0.670918297127655,0.919218786610021,2.20231761998777,1.0214987046815,2.15049146558741,0.659431438650969,0.548925861614458,0.52091337055676,0.837548997004143,2.8138130501584,2.13917546887534,0.589257170947335,0.569486723196412,1.67759501242771,1.74170244666323,2.11600368298999,7.8263411949453,30.1148356943485,314.146756172981,30.7630819233556,33.7883737072788,41.2184736129549,3.65155492342555,2.38602451609281,2.07828803682295,1.06001872353102,1.69012103732017,3.84979432242953,0,0,0.216491041011214,0.253359865475099,0,12.1034912502204,0.258937883647172,22.5632051378534,40.7690517900419,59.9796992274918,60.1906447838313,53.506537396181,31.0434186838261,21.8659868913635,3.46072954828123,9.25435884287435,4.42305275974937,1.7794353494215,0.883366073841574,0.969750506270444,1.86391761218122,0.585561594023094,1.25668024088073,0.510914110417183,1.43778149407104,0,0.762421362438388,3.44518470631092,2.28750301409313,0.753926112677186,2.43354048269187,6.13717097592793,2.70124457927428,3.0825839982874,3.1570202793598,6.22034853050465,0.505445516867349,1.05220927943237,1.04096354370163,2.29902104433473,1.80062129805349,1.35634336052144,1.49680298132921,1.15302348256365,2.52994656311268,1.03481348295606,2.80238390812695,2.08016688184601,1.05570674498369,1.7535658594206,1.39023624612799,1.39300866608867,0.823128545631774,16.5198441459349,0,0.51469581422943,1.13665399758237,3.31401236056803,3.98694301967864,2.52086886045421,1.18372367792605,1.96764231747404,1.69693824176116,1.39520366850245,2.41446061259657,1.5179494507732,1.31647879930784,1.80584210487005,1.78351381000883,2.19299981137998,0.439100230582101,1.74468344388483,2.73376933133365,1.13195073617213,0.660837565967596,0.264450566663544,2.98603550749328,3.25131340604614,1.67527699718721,2.01683524623343,2.2237804384487,2.09248188723815,1.4235871846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| ||
|EntrezGene=320184 | |||
|HGNC= | |||
|MCL_coexpression_id=99 | |||
|UniProt=Q3UGP9,Q8BTI3 | |||
|association_with_transcript=-185bp_to_ENSMUST00000078717,ENSMUST00000171099_5end | |||
|description=CAGE_peak_3_at_Lrrc58_5end | |||
|id=chr16:37868270..37868289,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!2.26e-17!79;UBERON:0005177!1.32e-15!85;UBERON:0002100!6.63e-13!98;UBERON:0009569!3.01e-12!66;UBERON:0005172!1.36e-10!49;UBERON:0005173!1.36e-10!49;UBERON:0002417!1.36e-10!49;UBERON:0000916!1.36e-10!49;UBERON:0002323!1.28e-09!37;UBERON:0004458!1.28e-09!37;UBERON:0002107!2.07e-09!22;UBERON:0007499!2.07e-09!22;UBERON:0006925!2.07e-09!22;UBERON:0009497!2.07e-09!22;UBERON:0000015!2.07e-09!22;UBERON:0002423!2.07e-09!22;UBERON:0006235!2.07e-09!22;UBERON:0008835!2.07e-09!22;UBERON:0003894!2.07e-09!22;UBERON:0004161!2.07e-09!22;UBERON:0008836!2.07e-09!22;UBERON:0009854!4.48e-09!23;UBERON:0009856!4.48e-09!23;UBERON:0000464!5.53e-09!57;UBERON:0003886!6.14e-09!38;UBERON:0002365!6.68e-09!25;UBERON:0002330!6.68e-09!25;UBERON:0002553!3.98e-08!39;UBERON:0005256!6.16e-08!47;UBERON:0003914!2.32e-07!47;UBERON:0001048!3.06e-07!147;UBERON:0001264!4.00e-07!12;UBERON:0003922!4.00e-07!12;UBERON:0002114!4.00e-07!12;UBERON:0003923!4.00e-07!12;UBERON:0003924!4.00e-07!12;UBERON:0003921!4.00e-07!12;UBERON:0005157!7.03e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.24e-18,79;UBERON:0002100,4.16e-16,90;UBERON:0009569,1.19e-12,66;UBERON:0005172,1.01e-10,49;UBERON:0005173,1.01e-10,49;UBERON:0002417,1.01e-10,49;UBERON:0000916,1.01e-10,49;UBERON:0002323,1.06e-09,37;UBERON:0004458,1.06e-09,37;UBERON:0002107,1.29e-09,22;UBERON:0007499,1.29e-09,22;UBERON:0006925,1.29e-09,22;UBERON:0009497,1.29e-09,22;UBERON:0000015,1.29e-09,22;UBERON:0002423,1.29e-09,22;UBERON:0006235,1.29e-09,22;UBERON:0008835,1.29e-09,22;UBERON:0003894,1.29e-09,22;UBERON:0004161,1.29e-09,22;UBERON:0008836,1.29e-09,22;UBERON:0002365,2.79e-09,25;UBERON:0002330,2.79e-09,25;UBERON:0009854,2.84e-09,23;UBERON:0009856,2.84e-09,23;UBERON:0005256,5.07e-09,45;UBERON:0003886,5.72e-09,38;UBERON:0002553,2.74e-08,39;UBERON:0003104,1.66e-07,61;UBERON:0009142,1.66e-07,61;UBERON:0003914,1.80e-07,47;UBERON:0001264,2.85e-07,12 | |||
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| |||
|short_description=p3@Lrrc58 | |||
}} |
Revision as of 12:36, 13 September 2013
Short description: | p3@Lrrc58 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lrrc58_5end |
Coexpression cluster: | MCL_coexpression_mm9:99 |
Association with transcript: | -185bp_to_ENSMUST00000078717, ENSMUST00000171099_5end |
EntrezGene: | Lrrc58 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.24e-18 | 79 |
trunk | 4.16e-16 | 90 |
subdivision of trunk | 1.19e-12 | 66 |
abdomen element | 1.01e-10 | 49 |
abdominal segment element | 1.01e-10 | 49 |
abdominal segment of trunk | 1.01e-10 | 49 |
abdomen | 1.01e-10 | 49 |
body cavity | 1.06e-09 | 37 |
body cavity or lining | 1.06e-09 | 37 |
liver | 1.29e-09 | 22 |
epithelial sac | 1.29e-09 | 22 |
digestive gland | 1.29e-09 | 22 |
epithelium of foregut-midgut junction | 1.29e-09 | 22 |
anatomical boundary | 1.29e-09 | 22 |
hepatobiliary system | 1.29e-09 | 22 |
foregut-midgut junction | 1.29e-09 | 22 |
hepatic diverticulum | 1.29e-09 | 22 |
liver primordium | 1.29e-09 | 22 |
septum transversum | 1.29e-09 | 22 |
liver bud | 1.29e-09 | 22 |
exocrine gland | 2.79e-09 | 25 |
exocrine system | 2.79e-09 | 25 |
digestive tract diverticulum | 2.84e-09 | 23 |
sac | 2.84e-09 | 23 |
trunk mesenchyme | 5.07e-09 | 45 |
body cavity precursor | 5.72e-09 | 38 |
anatomical cavity | 2.74e-08 | 39 |
mesenchyme | 1.66e-07 | 61 |
entire embryonic mesenchyme | 1.66e-07 | 61 |
epithelial tube | 1.80e-07 | 47 |
pancreas | 2.85e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.