FFCP PHASE1:Hg19::chr5:108083517..108083576,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2241|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3655|TSSclassifier=S|UniProt=P16591,B4DDX7,Q05DA5|association_with_transcript=0bp_to_ENST00000281092,ENST00000509035,ENST00000536402,NM_005246,uc003kop.1,uc011cve.1,uc011cvf.1_5end|coexpression_cluster_id=C12|description=CAGE_peak_3_at_FER_5end|id=chr5:108083517..108083576,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.16e-11!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.63e-10,114|phase1_expression=6.7221000330106,3.21150785836475,6.20199378022273,5.00366491765652,2.23480547213644,6.10636966870258,0,0,0,0,1.39560233594486,1.09220686065086,0.263766978228454,0.247532705920093,0.331397375727916,2.01697543935533,0,0.730310090387373,0.975865597581014,0.61560529038394,0,0,1.14494394852423,1.36874425072884,0.87879847716362,3.05653622991805,1.9704141467987,2.99100968991981,1.18009283054671,1.15148819429164,0.464448369948228,0,0,1.84877005083394,0,0,1.17440175733939,1.10799081706375,0,0.217010870715852,0.671746422719773,1.29557466407592,0.257575567634187,0.436194716338694,0.377875943688809,0,0,0,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0.545812300115692,0.449446968890169,0.306083892370903,0.320929027076094,0,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0.502497330513487,0,0.217188844705117,0,0.368277635987565,1.26584954976354,0,0.212604299965044,0,0.22465726229299,0.150176892841506,0.32145117339416,0.570025487482497,0,0,1.75996244461323,2.18455444504853,0.889509253863555,0.853460445133014,1.20118796110804,2.29900975981793,0,0.954053754535364,1.70763890732835,3.52342313622563,3.82273228125229,0,2.24203425192614,0,1.37696839079683,1.57204305099666,2.2616164889946,0,2.28145586643513,1.89379122293893,0,0.222820913770347,0.589211814949674,0.664601683750863,1.35401931882508,0,0.130059347559878,0,0,0.869409257205157,3.41059095272739,3.74557159325598,0,0.226618685395132,1.14966148080576,1.03088233644789,0.759059076058509,0.95569624297229,0,0,1.6563263098555,1.53583933385302,1.24930726552346,1.89421801635213,0,1.61285394579786,1.60464117470104,2.02754165435919,0,0.670700859703636,1.40648818027883,0.722878304769133,1.50401373190767,0.579386075843295,0,0.486634870302636,0.378139268656271,0.665188192387692,0.351339142772504,0.72038491523742,0.364295288292542,0.370784442784429,1.29818957461873,0.696518949197069,0.398873881556595,0.953962497221368,2.28797964312051,0,0.79504962946682,0,0,0,0.838998872419812,0.550236083880135,0.208994966536811,2.06733407335463,2.49036383880697,1.33888245105868,1.20848795132744,1.52054421143703,0.976248230192678,0.735326160691737,0,2.58969212023831,0.898117490504679,0.675668882899933,0,0,0.549605231791222,0,0,0,0.993943903390637,1.77282716330412,3.70745706277013,8.03142538096678,0.709336764396714,1.68203280042692,1.06748995729705,0.74000264525148,1.24484414159907,2.2900814251847,3.75962377160955,0.302714855289863,1.15235184896,0,0,0.570471821544449,0.149448680551801,0,0.323745888736263,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,0.150238058906597,2.26864366320042,1.25572744982203,0.640672166455702,1.05965950579781,2.10063767259082,1.64884046781502,0.257640540045629,0.744467425326359,1.68776332241266,1.46155507741798,3.28163906517349,1.01254888506529,1.2931684545505,1.42003837006646,0.302256294682921,0.339121184620975,0.773043412653187,1.36373060295417,2.58124135850103,0,0.132529768321485,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,1.0647612003586,1.68584690078102,0.964044119533928,1.65440959098591,2.61455332910887,1.42362371466658,0.808987848960987,2.35465758150415,1.53898862778556,0.738155454624648,0,0,1.47008711385542,2.53510069643662,1.96565443335525,1.77236972004421,0,0.122988438543114,1.20097467208968,1.86575485194663,0,1.00528972411631,0.925884451585296,0,0,0,0.231860809950154,0.939269553886573,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0.738651018262192,0.936017060556951,0.445893486866185,1.87467667973554,2.85569617938061,1.70130116690864,1.61205340865127,1.45316969256981,0.766765358330422,36.4570796042998,6.60363255099195,29.6479205223304,24.9327519411343,31.6868507900214,0.380987365753014,0.381988425558278,1.17217447210047,0,0.616964956219941,1.20137223137567,1.14330573052231,0.448524337381443,0,1.24675085895615,1.55126058909333,0,0,0.531876233169741,0,0,0,0,0.714889968290738,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0.904318131178758,0,1.09970290300263,1.2162378064119,0,0,0.479249710983165,0,0,1.44781306667579,0.205476322550383,0.358121926479791,0,2.167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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2241 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3655 | |||
|TSSclassifier=S | |||
|UniProt=P16591,B4DDX7,Q05DA5 | |||
|association_with_transcript=0bp_to_ENST00000281092,ENST00000509035,ENST00000536402,NM_005246,uc003kop.1,uc011cve.1,uc011cvf.1_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_3_at_FER_5end | |||
|id=chr5:108083517..108083576,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.16e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.63e-10,114 | |||
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| |||
|short_description=p3@FER | |||
}} |
Revision as of 12:35, 13 September 2013
Short description: | p3@FER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FER_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_ENST00000281092, ENST00000509035, ENST00000536402, NM_005246, uc003kop.1, uc011cve.1, uc011cvf.1_5end |
EntrezGene: | FER |
HGNC: | 3655 |
UniProt: | P16591B4DDX7Q05DA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.63e-10 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.