FFCP PHASE1:Hg19::chr5:1043617..1043642,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1947|description=CAGE_peak_at_chr5:1043617..1043642,+|id=chr5:1043617..1043642,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:1000487;6.43e-14;2!CL:0000214;1.14e-09;3!CL:0000746;1.35e-09;3!CL:0002178;1.35e-09;3!CL:0000737;1.64e-07;4|ontology_enrichment_celltype_v019_2=CL:1000487,6.43e-14,2;CL:0000214,1.19e-09,3;CL:0002178,1.30e-09,3;CL:0000746,1.41e-09,3;CL:0000513,1.41e-09,3;CL:0000737,1.69e-07,4|ontology_enrichment_development_v019=CL:0000513;1.35e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5409;1.44e-07;4|ontology_enrichment_disease_v019_2=DOID:5409,1.40e-07,4|ontology_enrichment_uberon=UBERON:0002619!1.32e-14!22;UBERON:0001950!1.32e-13!20;UBERON:0000956!1.50e-12!25;UBERON:0000203!1.50e-12!25;UBERON:0001869!1.75e-12!32;UBERON:0002020!1.18e-11!34;UBERON:0003528!1.18e-11!34;UBERON:0001893!1.48e-11!34;UBERON:0002780!2.47e-10!41;UBERON:0001890!2.47e-10!41;UBERON:0006240!2.47e-10!41;UBERON:0002791!2.49e-10!33;UBERON:0000955!3.62e-10!69;UBERON:0006238!3.62e-10!69;UBERON:0003080!5.29e-10!42;UBERON:0000200!5.55e-10!6;UBERON:0001049!1.05e-09!57;UBERON:0005068!1.05e-09!57;UBERON:0006241!1.05e-09!57;UBERON:0007135!1.05e-09!57;UBERON:0002616!3.16e-09!59;UBERON:0001017!1.04e-08!82;UBERON:0002294!1.52e-08!7;UBERON:0001173!1.52e-08!7;UBERON:0004912!1.52e-08!7;UBERON:0002771!4.52e-08!3;UBERON:0005743!4.60e-08!86;UBERON:0002110!6.18e-08!3;UBERON:0006242!6.18e-08!3;UBERON:0007023!6.32e-08!115;UBERON:0000025!1.71e-07!194;UBERON:0001871!2.70e-07!7;UBERON:0000073!7.98e-07!94;UBERON:0001016!7.98e-07!94;UBERON:0002346!8.00e-07!90|ontology_enrichment_uberon_v019=UBERON:0006915;1.14e-09;3!UBERON:0007616;1.14e-09;3!UBERON:0002217;1.14e-09;3!UBERON:0002018;1.14e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.19e-09,3;UBERON:0007616,1.19e-09,3;UBERON:0002217,1.19e-09,3;UBERON:0002018,1.19e-09,3|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37340641424108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426851060090485,0.159426272728822,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,1.1241165257259,0.80719882876419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0.537063524026827,1.02314474045374,0,0,0,0.969332746095218,0,0,0,0,0,0,0.508507300585533,0,0,0,0.347249989866585,0,0.120596438625408,0,0.331737779793674,0,0.219385397153973,0.10893846351899,0,0,0,0,0,0.325942115766024,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0,0,0.253243183823515,0.391102765469606,0.0801588202515337,0.640358984218058,2.79733453414982,0.144090417154106,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0,0,0,0,0,0.242998226632099,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0.171086837884329,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0.3062454773532,0,0,0.319267718114302,0,0,0.0691572524642179,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0.202612753855184,0,1.86018116851066,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0.236387681767936,0,0,0,0.560544326627578,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994753875806841,0,3.84016678932464,0,0.150962843566674,0,0.218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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1947 | |||
|description=CAGE_peak_at_chr5:1043617..1043642,+ | |||
|id=chr5:1043617..1043642,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000487;6.43e-14;2!CL:0000214;1.14e-09;3!CL:0000746;1.35e-09;3!CL:0002178;1.35e-09;3!CL:0000737;1.64e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,6.43e-14,2;CL:0000214,1.19e-09,3;CL:0002178,1.30e-09,3;CL:0000746,1.41e-09,3;CL:0000513,1.41e-09,3;CL:0000737,1.69e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000513;1.35e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.44e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.40e-07,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0006915;1.14e-09;3!UBERON:0007616;1.14e-09;3!UBERON:0002217;1.14e-09;3!UBERON:0002018;1.14e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.19e-09,3;UBERON:0007616,1.19e-09,3;UBERON:0002217,1.19e-09,3;UBERON:0002018,1.19e-09,3 | |||
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|short_description=p@chr5:1043617..1043642,+ | |||
}} |
Revision as of 12:31, 13 September 2013
Short description: | p@chr5:1043617..1043642, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:1043617..1043642, + |
Coexpression cluster: | C1947_Smooth_synovial_small_gastric_parietal_Cardiac_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 6.43e-14 | 2 |
synovial cell | 1.19e-09 | 3 |
epithelial cell of stomach | 1.30e-09 | 3 |
cardiac muscle cell | 1.41e-09 | 3 |
cardiac muscle myoblast | 1.41e-09 | 3 |
striated muscle cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.19e-09 | 3 |
layer of synovial tissue | 1.19e-09 | 3 |
synovial joint | 1.19e-09 | 3 |
synovial membrane of synovial joint | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.40e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.