FFCP PHASE1:Hg19::chr5:103551489..103551493,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4445|description=CAGE_peak_at_chr5:103551489..103551493,+|id=chr5:103551489..103551493,+|ontology_enrichment_celltype=CL:0000066!1.03e-11!254;CL:0000181!1.27e-09!12;CL:0000417!1.27e-09!12;CL:0000668!1.27e-09!12;CL:0000414!1.27e-09!12;CL:0000412!1.27e-09!12;CL:0000182!1.27e-09!12;CL:0000223!1.97e-09!59;CL:0000039!2.23e-09!7;CL:0000586!2.23e-09!7;CL:0002178!2.48e-08!3|ontology_enrichment_celltype_v019=CL:0000182;3.27e-09;12!CL:0000243;7.99e-07;15!CL:0000125;7.99e-07;15|ontology_enrichment_celltype_v019_2=CL:0000182,3.27e-09,12;CL:0000243,7.43e-07,15;CL:0000125,7.43e-07,15;CL:0000030,7.43e-07,15;CL:0000339,7.43e-07,15|ontology_enrichment_development_v019=UBERON:0006238;4.73e-10;10!UBERON:0004161;5.79e-10;11!UBERON:0009497;1.42e-08;13!UBERON:0001041;4.02e-08;30!CL:0000339;7.99e-07;15|ontology_enrichment_disease=DOID:305!1.46e-35!106;DOID:162!1.04e-32!235;DOID:0050687!1.87e-32!143;DOID:14566!1.08e-31!239;DOID:0050686!1.16e-12!137;DOID:299!2.50e-10!25;DOID:3095!2.56e-08!22;DOID:2994!2.56e-08!22;DOID:1749!5.39e-08!14;DOID:7!7.81e-08!39;DOID:1036!9.78e-08!8|ontology_enrichment_disease_v019=DOID:4960;6.72e-26;1!DOID:0070004;6.72e-26;1!DOID:3093;2.71e-09;11!DOID:5409;1.40e-07;4|ontology_enrichment_disease_v019_2=DOID:4960,1.26e-25,1;DOID:0070004,1.26e-25,1;DOID:3093,2.44e-09,11;DOID:5409,1.40e-07,4|ontology_enrichment_uberon=UBERON:0009497!9.17e-12!25;UBERON:0000015!9.17e-12!25;UBERON:0002423!9.17e-12!25;UBERON:0006235!9.17e-12!25;UBERON:0004161!9.17e-12!25;UBERON:0007499!5.03e-10!25;UBERON:0009856!1.51e-09!26;UBERON:0008835!1.62e-09!22;UBERON:0003894!1.62e-09!22;UBERON:0005911!3.69e-09!82;UBERON:0009854!5.15e-09!23;UBERON:0002294!6.53e-09!7;UBERON:0001173!6.53e-09!7;UBERON:0004912!6.53e-09!7;UBERON:0002107!2.88e-07!19;UBERON:0006925!2.88e-07!19;UBERON:0008836!2.88e-07!19;UBERON:0003929!8.94e-07!54|ontology_enrichment_uberon_v019=UBERON:0001282;6.72e-26;1!UBERON:0009842;6.72e-26;1!UBERON:0003704;6.72e-26;1!UBERON:0001171;6.72e-26;1!UBERON:0001172;6.72e-26;1!UBERON:0001280;1.47e-09;3!UBERON:0004647;1.47e-09;3!UBERON:0002394;1.75e-07;4!UBERON:0003928;1.75e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.62e-26,1;UBERON:0009842,7.62e-26,1;UBERON:0003704,7.62e-26,1;UBERON:0001171,7.62e-26,1;UBERON:0001172,7.62e-26,1;UBERON:0001280,1.54e-09,3;UBERON:0004647,1.54e-09,3;UBERON:0005171,1.54e-09,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.7812832832557,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,1.13942055847001,0.23056390438806,0.179515288819544,0.54323685961004,0,0,0,0,0,0,0.225595660617181,0.392125068635479,0.167821586975843,0.569261198172555,0.158936578980379,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,1.13843818411917,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.160317640503067,0,0.999048047910651,0.288180834308212,0,0,0,0,0,1.49494626680975,3.03348254305766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.393915911536118,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0.395223263795889,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03328987796489,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0.0788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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4445 | |||
|description=CAGE_peak_at_chr5:103551489..103551493,+ | |||
|id=chr5:103551489..103551493,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.03e-11!254;CL:0000181!1.27e-09!12;CL:0000417!1.27e-09!12;CL:0000668!1.27e-09!12;CL:0000414!1.27e-09!12;CL:0000412!1.27e-09!12;CL:0000182!1.27e-09!12;CL:0000223!1.97e-09!59;CL:0000039!2.23e-09!7;CL:0000586!2.23e-09!7;CL:0002178!2.48e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.27e-09;12!CL:0000243;7.99e-07;15!CL:0000125;7.99e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.27e-09,12;CL:0000243,7.43e-07,15;CL:0000125,7.43e-07,15;CL:0000030,7.43e-07,15;CL:0000339,7.43e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006238;4.73e-10;10!UBERON:0004161;5.79e-10;11!UBERON:0009497;1.42e-08;13!UBERON:0001041;4.02e-08;30!CL:0000339;7.99e-07;15 | |||
|ontology_enrichment_disease=DOID:305!1.46e-35!106;DOID:162!1.04e-32!235;DOID:0050687!1.87e-32!143;DOID:14566!1.08e-31!239;DOID:0050686!1.16e-12!137;DOID:299!2.50e-10!25;DOID:3095!2.56e-08!22;DOID:2994!2.56e-08!22;DOID:1749!5.39e-08!14;DOID:7!7.81e-08!39;DOID:1036!9.78e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:4960;6.72e-26;1!DOID:0070004;6.72e-26;1!DOID:3093;2.71e-09;11!DOID:5409;1.40e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.26e-25,1;DOID:0070004,1.26e-25,1;DOID:3093,2.44e-09,11;DOID:5409,1.40e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0009497!9.17e-12!25;UBERON:0000015!9.17e-12!25;UBERON:0002423!9.17e-12!25;UBERON:0006235!9.17e-12!25;UBERON:0004161!9.17e-12!25;UBERON:0007499!5.03e-10!25;UBERON:0009856!1.51e-09!26;UBERON:0008835!1.62e-09!22;UBERON:0003894!1.62e-09!22;UBERON:0005911!3.69e-09!82;UBERON:0009854!5.15e-09!23;UBERON:0002294!6.53e-09!7;UBERON:0001173!6.53e-09!7;UBERON:0004912!6.53e-09!7;UBERON:0002107!2.88e-07!19;UBERON:0006925!2.88e-07!19;UBERON:0008836!2.88e-07!19;UBERON:0003929!8.94e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;6.72e-26;1!UBERON:0009842;6.72e-26;1!UBERON:0003704;6.72e-26;1!UBERON:0001171;6.72e-26;1!UBERON:0001172;6.72e-26;1!UBERON:0001280;1.47e-09;3!UBERON:0004647;1.47e-09;3!UBERON:0002394;1.75e-07;4!UBERON:0003928;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.62e-26,1;UBERON:0009842,7.62e-26,1;UBERON:0003704,7.62e-26,1;UBERON:0001171,7.62e-26,1;UBERON:0001172,7.62e-26,1;UBERON:0001280,1.54e-09,3;UBERON:0004647,1.54e-09,3;UBERON:0005171,1.54e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.7812832832557,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,1.13942055847001,0.23056390438806,0.179515288819544,0.54323685961004,0,0,0,0,0,0,0.225595660617181,0.392125068635479,0.167821586975843,0.569261198172555,0.158936578980379,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,1.13843818411917,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.160317640503067,0,0.999048047910651,0.288180834308212,0,0,0,0,0,1.49494626680975,3.03348254305766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.393915911536118,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0.395223263795889,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03328987796489,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.342976018874837,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.223710863595585,0.098150233615243,0,0,0,0,0,0,0.397901550322736,0,2.2589216407792,0,0.150962843566674,0,0,0,0,0.707029641304878,0,0,0,0,0,0,0.399764623699716,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.764859003745869,0.886889507080059,0,0,0.551369397209069,0.752122617877125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853818767021724,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:103551489..103551493,+ | |||
}} |
Revision as of 12:30, 13 September 2013
Short description: | p@chr5:103551489..103551493, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:103551489..103551493, + |
Coexpression cluster: | C4445_glioblastoma_somatostatinoma_small_teratocarcinoma_transitionalcell_hepatoblastoma_large |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.27e-09 | 12 |
glial cell (sensu Vertebrata) | 7.43e-07 | 15 |
glial cell | 7.43e-07 | 15 |
glioblast | 7.43e-07 | 15 |
glioblast (sensu Vertebrata) | 7.43e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 7.62e-26 | 1 |
acinus | 7.62e-26 | 1 |
intrahepatic bile duct | 7.62e-26 | 1 |
portal lobule | 7.62e-26 | 1 |
hepatic acinus | 7.62e-26 | 1 |
liver parenchyma | 1.54e-09 | 3 |
liver lobule | 1.54e-09 | 3 |
hepatic duct | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.26e-25 | 1 |
myeloma | 1.26e-25 | 1 |
nervous system cancer | 2.44e-09 | 11 |
lung small cell carcinoma | 1.40e-07 | 4 |
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