FFCP PHASE1:Hg19::chr5:102090346..102090364,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5066|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8596|TSSclassifier=S|UniProt=|association_with_transcript=-6bp_to_ENST00000508060_5end|description=CAGE_peak_28_at_PAM_5end|id=chr5:102090346..102090364,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;9.07e-18;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004140;1.84e-34;1!UBERON:0006215;2.59e-12;3!UBERON:0005062;1.44e-09;4!UBERON:0007284;1.44e-09;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.87e-11!94;UBERON:0001016!3.87e-11!94;UBERON:0007023!1.22e-10!115;UBERON:0004733!1.27e-10!12;UBERON:0002028!1.27e-10!12;UBERON:0007277!1.27e-10!12;UBERON:0003076!2.76e-10!15;UBERON:0003057!2.76e-10!15;UBERON:0005743!2.80e-10!86;UBERON:0004732!1.17e-09!13;UBERON:0002680!2.03e-09!9;UBERON:0001895!2.03e-09!9;UBERON:0010092!2.03e-09!9;UBERON:0001017!3.42e-09!82;UBERON:0001049!3.82e-09!57;UBERON:0005068!3.82e-09!57;UBERON:0006241!3.82e-09!57;UBERON:0007135!3.82e-09!57;UBERON:0003075!8.02e-09!86;UBERON:0007284!8.02e-09!86;UBERON:0002346!3.97e-08!90;UBERON:0002616!1.28e-07!59;UBERON:0000955!3.94e-07!69;UBERON:0006238!3.94e-07!69;UBERON:0004121!8.76e-07!169|ontology_enrichment_uberon_v019=UBERON:0002135;5.05e-34;1!UBERON:0002133;9.07e-18;2!UBERON:0003978;2.59e-12;3!UBERON:0000946;2.59e-12;3!UBERON:0000948;5.09e-07;22!UBERON:0002037;8.48e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002135,7.06e-34,1;UBERON:0002133,1.07e-17,2;UBERON:0003978,2.89e-12,3;UBERON:0009751,2.89e-12,3;UBERON:0000946,2.89e-12,3;UBERON:0002523,2.89e-12,3;UBERON:0005983,2.89e-12,3;UBERON:0002165,2.89e-12,3;UBERON:0002062,2.89e-12,3;UBERON:0007280,2.89e-12,3;UBERON:0002037,8.48e-07,6;UBERON:0006215,8.48e-07,6|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0.262248829918848,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0.211125408127993,0.19924798825107,0,0.503865495708552,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.110579259931225,1.18219047581419,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,1.11712960508902,0.916641696046735,0,0,0.429226048136571,0,4.03100834920358,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0.139879507719444,0,0.383683113910955,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0.0691572524642179,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.317079050969534,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0.543757863814654,0.0657727735628491,0,0.222462803784138,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.718639647993729,0,0,0.233939463462106,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0.135982980381829,0,0,0,0.462175628631418,0,0,0,1.52038201213724,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0,0.162806537221949,0.106727345877715,0,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0|short_description=p28@PAM}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5066 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8596 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_ENST00000508060_5end | |||
|description=CAGE_peak_28_at_PAM_5end | |||
|id=chr5:102090346..102090364,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.07e-18;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.84e-34;1!UBERON:0006215;2.59e-12;3!UBERON:0005062;1.44e-09;4!UBERON:0007284;1.44e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.87e-11!94;UBERON:0001016!3.87e-11!94;UBERON:0007023!1.22e-10!115;UBERON:0004733!1.27e-10!12;UBERON:0002028!1.27e-10!12;UBERON:0007277!1.27e-10!12;UBERON:0003076!2.76e-10!15;UBERON:0003057!2.76e-10!15;UBERON:0005743!2.80e-10!86;UBERON:0004732!1.17e-09!13;UBERON:0002680!2.03e-09!9;UBERON:0001895!2.03e-09!9;UBERON:0010092!2.03e-09!9;UBERON:0001017!3.42e-09!82;UBERON:0001049!3.82e-09!57;UBERON:0005068!3.82e-09!57;UBERON:0006241!3.82e-09!57;UBERON:0007135!3.82e-09!57;UBERON:0003075!8.02e-09!86;UBERON:0007284!8.02e-09!86;UBERON:0002346!3.97e-08!90;UBERON:0002616!1.28e-07!59;UBERON:0000955!3.94e-07!69;UBERON:0006238!3.94e-07!69;UBERON:0004121!8.76e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002135;5.05e-34;1!UBERON:0002133;9.07e-18;2!UBERON:0003978;2.59e-12;3!UBERON:0000946;2.59e-12;3!UBERON:0000948;5.09e-07;22!UBERON:0002037;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,7.06e-34,1;UBERON:0002133,1.07e-17,2;UBERON:0003978,2.89e-12,3;UBERON:0009751,2.89e-12,3;UBERON:0000946,2.89e-12,3;UBERON:0002523,2.89e-12,3;UBERON:0005983,2.89e-12,3;UBERON:0002165,2.89e-12,3;UBERON:0002062,2.89e-12,3;UBERON:0007280,2.89e-12,3;UBERON:0002037,8.48e-07,6;UBERON:0006215,8.48e-07,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0.262248829918848,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0.211125408127993,0.19924798825107,0,0.503865495708552,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.110579259931225,1.18219047581419,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,1.11712960508902,0.916641696046735,0,0,0.429226048136571,0,4.03100834920358,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0.139879507719444,0,0.383683113910955,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0.0691572524642179,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.317079050969534,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0.543757863814654,0.0657727735628491,0,0.222462803784138,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.718639647993729,0,0,0.233939463462106,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0.135982980381829,0,0,0,0.462175628631418,0,0,0,1.52038201213724,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0,0.162806537221949,0.106727345877715,0,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p28@PAM | |||
}} |
Revision as of 12:28, 13 September 2013
Short description: | p28@PAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_PAM_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000508060_5end |
EntrezGene: | PAM |
HGNC: | 8596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mitral valve | 7.06e-34 | 1 |
atrioventricular valve | 1.07e-17 | 2 |
valve | 2.89e-12 | 3 |
cardiac mesenchyme | 2.89e-12 | 3 |
cardial valve | 2.89e-12 | 3 |
tunica intima | 2.89e-12 | 3 |
heart layer | 2.89e-12 | 3 |
endocardium | 2.89e-12 | 3 |
endocardial cushion | 2.89e-12 | 3 |
presumptive endocardium | 2.89e-12 | 3 |
cerebellum | 8.48e-07 | 6 |
rhombic lip | 8.48e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.