FFCP PHASE1:Hg19::chr4:89299994..89300011,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55008|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26072|TSSclassifier=S|UniProt=Q8IVU3|association_with_transcript=-3bp_to_ENST00000264346_5end|coexpression_cluster_id=C678|description=CAGE_peak_2_at_HERC6_5end|id=chr4:89299994..89300011,+|ontology_enrichment_celltype=CL:0000791!3.37e-08!18;CL:0000789!3.37e-08!18;CL:0002420!3.37e-08!18;CL:0002419!3.37e-08!18;CL:0000790!3.37e-08!18|ontology_enrichment_celltype_v019=CL:0000791;6.04e-11;18!CL:0000789;6.04e-11;18!CL:0002419;6.04e-11;18!CL:0000625;9.08e-08;11|ontology_enrichment_celltype_v019_2=CL:0000791,7.10e-11,18;CL:0000789,7.10e-11,18;CL:0002420,7.10e-11,18;CL:0002419,7.10e-11,18;CL:0000790,7.10e-11,18;CL:0000625,1.15e-07,11|ontology_enrichment_development_v019=CL:0000790;6.04e-11;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.21e-17!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.09e-11,114;UBERON:0001557,9.84e-08,19|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0.994192127183747,0.672325146451775,0,0,0,0.246242116153576,0.204000691244253,0,1.14494394852423,0.136874425072884,0.251085279189606,0.534893840235659,0.328402357799783,0.0787107813136792,0,0.767658796194425,0.309632246632152,1.83884244895785,0,0,0,0,0.587200878669695,1.66198622559563,0.401088894940283,0.868043482863407,1.11957737119962,0.647787332037959,1.28787783817093,0.290796477559129,0,0.485168122375632,0.697287110717054,0,0.929119112685311,2.3015391385772,0.768482119587302,1.41889337933151,2.41321976515633,0.645484683583826,0,0.564727018627814,0,0.224723484445085,9.79468455586888,2.56743221660875,4.47535988059329,3.29851300186716,0.997318288108159,2.13112375266347,29.8915515787442,18.1563271901165,14.9477339758938,2.51248665256743,0,1.95469960234605,53.2751562317365,22.0966581592539,34.1779378436155,0.845021145247767,0.637812899895131,1.25795187305026,0.561643155732475,0.750884464207532,0.32145117339416,0.855038231223746,0.59675003159727,0.365328307529268,1.75996244461323,2.18455444504853,0.889509253863555,1.70692089026603,0.400395987036012,0,1.32208974556972,0,0,0,0.382273228125229,0,1.68152568894461,0.263384084775077,3.34406609193516,2.35806457649499,2.46721798799411,1.5046784585161,2.60737813306872,2.8406868344084,0,4.56782873229212,5.30290633454707,1.77227115666897,3.5204502289452,2.43373507478783,5.9827299877544,2.30213066445147,1.10540007114339,1.44901542867526,3.70716407905151,2.1403266247177,4.18142095219907,1.13309342697566,2.68254345521345,2.74901956386104,4.04831507231205,3.18565414324097,3.90650072313851,3.8018081777935,4.36667845325541,2.30375900077953,1.24930726552346,2.60454977248419,0.821127996921047,3.42731463482045,3.20928234940209,4.19990771260117,2.43806866313962,0,0.12786256184353,0,0.50133791063589,0.579386075843295,1.5905718941022,0,0.283604451492204,0,0.087834785693126,1.5062593682237,0,0,0,1.0447784237956,0.398873881556595,0,1.14398982156026,0.371457501329565,0,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,1.42306505074684,0,0,0,0.24406205754817,0.367663080345869,0,0.446498641420399,0,0.337834441449967,0,0,0,2.63560834872127,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,0.709336764396714,0,0,0.98667019366864,0.622422070799533,0.134710672069688,0,0,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0.204154171254893,0.122834317311768,0.413303124703062,19.0080457165129,7.17074094907815,0,0,0,0,0.831192346452549,0,0.612975591598039,5.55880817954408,0.113432183160021,0.179389635688862,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,1.35282597214308,4.09119180886252,2.00763216772303,0,0,0,0.310983165046111,0,0,12.5159625863853,1.28648187638577,1.38134921352481,0.464367928031979,0,1.65629520055781,2.19160097101532,2.16909926895134,1.65440959098591,2.17879444092406,1.42362371466658,2.83145747136345,3.13954344200554,3.46272441251751,0,0,0,0,0,0,0.590789906681404,0,1.10689594688802,0,0.548751427043128,0,2.71428225511403,0.740707561268237,0.651616610620649,0,0,0,0.234817388471643,0.721832238805369,0.925971025153221,0.380508304469197,0,0,0.984868024349589,0.468008530278475,0.297262324577456,0,4.70349958956807,3.96970272278682,0.626909658919938,0,0,0,0.44024217006613,0.621984346622316,2.16179930125442,0.6312121671319,0.190493682876507,1.90994212779139,1.17217447210047,0,0.308482478109971,0.901029173531752,2.85826432630578,0,0,0.1466765716419,0.258543431515556,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,0.479249710983165,0,0,2.31650090668127,0.410952645100767,0.179060963239896,0,2.75843064282698,2.37190332345469,1.41177339907723,0,0,0,0.167516265334349,0,0,2.99161459204025,1.65766205374414,0.12269149171914,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26072 | |||
|TSSclassifier=S | |||
|UniProt=Q8IVU3 | |||
|association_with_transcript=-3bp_to_ENST00000264346_5end | |||
|coexpression_cluster_id=C678 | |||
|description=CAGE_peak_2_at_HERC6_5end | |||
|id=chr4:89299994..89300011,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.37e-08!18;CL:0000789!3.37e-08!18;CL:0002420!3.37e-08!18;CL:0002419!3.37e-08!18;CL:0000790!3.37e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.04e-11;18!CL:0000789;6.04e-11;18!CL:0002419;6.04e-11;18!CL:0000625;9.08e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.10e-11,18;CL:0000789,7.10e-11,18;CL:0002420,7.10e-11,18;CL:0002419,7.10e-11,18;CL:0000790,7.10e-11,18;CL:0000625,1.15e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.04e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.21e-17!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.09e-11,114;UBERON:0001557,9.84e-08,19 | |||
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| |||
|short_description=p2@HERC6 | |||
}} |
Revision as of 12:16, 13 September 2013
Short description: | p2@HERC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HERC6_5end |
Coexpression cluster: | C678_Smooth_CD14_embryonic_mesothelioma_gall_Fibroblast_meningioma |
Association with transcript: | -3bp_to_ENST00000264346_5end |
EntrezGene: | HERC6 |
HGNC: | 26072 |
UniProt: | Q8IVU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.10e-11 | 18 |
alpha-beta T cell | 7.10e-11 | 18 |
immature T cell | 7.10e-11 | 18 |
mature T cell | 7.10e-11 | 18 |
immature alpha-beta T cell | 7.10e-11 | 18 |
CD8-positive, alpha-beta T cell | 1.15e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.09e-11 | 114 |
upper respiratory tract | 9.84e-08 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.