FFCP PHASE1:Hg19::chr4:88976807..88976812,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5311|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9009|TSSclassifier=N|UniProt=B4DFN3|association_with_transcript=-405bp_to_ENST00000502363_5end|description=CAGE_peak_2_at_PKD2_5end|id=chr4:88976807..88976812,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000197;3.66e-14;6!CL:0000098;3.66e-14;6!CL:0002167;3.66e-14;6|ontology_enrichment_celltype_v019_2=CL:0000197,6.41e-14,6;CL:0000098,6.41e-14,6;CL:0002167,6.41e-14,6;CL:0002616,8.97e-07,1|ontology_enrichment_development_v019=UBERON:0005425;4.32e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.83e-14!94;UBERON:0001016!3.83e-14!94;UBERON:0001049!4.00e-14!57;UBERON:0005068!4.00e-14!57;UBERON:0006241!4.00e-14!57;UBERON:0007135!4.00e-14!57;UBERON:0007023!5.53e-13!115;UBERON:0001017!7.50e-13!82;UBERON:0005743!1.94e-12!86;UBERON:0000955!2.82e-12!69;UBERON:0006238!2.82e-12!69;UBERON:0003080!4.03e-12!42;UBERON:0002616!7.08e-12!59;UBERON:0002780!1.31e-11!41;UBERON:0001890!1.31e-11!41;UBERON:0006240!1.31e-11!41;UBERON:0002346!3.46e-10!90;UBERON:0003075!1.17e-09!86;UBERON:0007284!1.17e-09!86;UBERON:0002020!1.44e-09!34;UBERON:0003528!1.44e-09!34;UBERON:0001893!4.59e-09!34;UBERON:0002791!1.01e-08!33;UBERON:0001869!2.03e-08!32;UBERON:0000956!2.46e-08!25;UBERON:0000203!2.46e-08!25;UBERON:0003056!3.26e-08!61;UBERON:0002619!6.43e-07!22|ontology_enrichment_uberon_v019=UBERON:0005406;1.89e-11;2!UBERON:0000941;4.32e-07;1!UBERON:0001785;4.32e-07;1!UBERON:0002464;4.32e-07;1!UBERON:0004904;4.32e-07;1!UBERON:0001021;4.32e-07;1!UBERON:0001000;5.73e-07;1!UBERON:0005352;5.73e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0005406,9.48e-12,2;UBERON:0000941,4.58e-07,1;UBERON:0001785,4.58e-07,1;UBERON:0002464,4.58e-07,1;UBERON:0004904,4.58e-07,1;UBERON:0001021,4.58e-07,1;UBERON:0003902,4.58e-07,1;UBERON:0005425,4.58e-07,1;UBERON:0002780,6.60e-07,41;UBERON:0001890,6.60e-07,41;UBERON:0003080,6.60e-07,41;UBERON:0006240,6.60e-07,41;UBERON:0001000,6.80e-07,1;UBERON:0005352,6.80e-07,1;UBERON:0002038,9.48e-07,1;UBERON:0009661,9.48e-07,1;UBERON:0002950,9.48e-07,1;UBERON:0001891,9.48e-07,1;UBERON:0009616,9.48e-07,1;UBERON:0010286,9.48e-07,1|phase1_expression=0.181678379270557,0,0.563817616383885,0,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.85870796139317,0.684372125364421,0.502170558379211,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.232401601740905,0.426507697462265,0,0,0.401088894940283,0,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0.196709770113833,0,0,0.501559486172034,0,0.473447805734733,0,0.334231370655521,0,0.664601683750863,0,2.5618263945135,4.68213651215562,0.657751618414705,0.552700035571697,0.289803085735052,0.14828656316206,0.535081656179426,0,0.339928028092699,0,0,0,0.637130828648193,0,0,0,0,1.24930726552346,0.473554504088034,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.472674085820339,0.443458794925128,0.087834785693126,0.523916301990851,0,0,0.649094787309367,0.348259474598534,0.531831842075461,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0.775250277507987,0.35576626268671,0.33472061276467,0,0,0,0,0.81014194788176,0.535798369704479,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0.560677600142307,0,0,0,0.269421344139376,0,0,0,0,0,0.570471821544449,0.298897361103602,0,0.323745888736263,0.280901613404497,0,0.61417158655884,0.206651562351531,0,0.247266929278557,0,0,0,0.375355559615893,0,0,0,0,0,0.179389635688862,0,0.847727604638247,0.300091096084402,0,1.03056216018252,0,0.168776332241266,0.194874010322397,0.504867548488229,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0,0,0,1.97065295158377,0.616339038092582,0.207328115540772,0,0.12624243342638,0.444485260045183,0.381988425558278,0,0,0.308482478109971,0,0.285826432630578,0.112131084345361,0,0.2933531432838,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0,0,0.479249710983165,0,0,0,0.410952645100767,0.179060963239896,0.224170287987055,0.197030760201927,0.215627574859517,0.128343036279748,0,1.30139853857622,0,0.335032530668698,1.91381625495949,0,0,0,0,0,0.271265023699736,1.87173775377726,1.07057393278297,1.10391690523754,1.05427273493442,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0.61384789315225,0.561320188866147,0.128139149255701,0.511707249066704,0.16085392114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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5311 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9009 | |||
|TSSclassifier=N | |||
|UniProt=B4DFN3 | |||
|association_with_transcript=-405bp_to_ENST00000502363_5end | |||
|description=CAGE_peak_2_at_PKD2_5end | |||
|id=chr4:88976807..88976812,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000197;3.66e-14;6!CL:0000098;3.66e-14;6!CL:0002167;3.66e-14;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,6.41e-14,6;CL:0000098,6.41e-14,6;CL:0002167,6.41e-14,6;CL:0002616,8.97e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.32e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.83e-14!94;UBERON:0001016!3.83e-14!94;UBERON:0001049!4.00e-14!57;UBERON:0005068!4.00e-14!57;UBERON:0006241!4.00e-14!57;UBERON:0007135!4.00e-14!57;UBERON:0007023!5.53e-13!115;UBERON:0001017!7.50e-13!82;UBERON:0005743!1.94e-12!86;UBERON:0000955!2.82e-12!69;UBERON:0006238!2.82e-12!69;UBERON:0003080!4.03e-12!42;UBERON:0002616!7.08e-12!59;UBERON:0002780!1.31e-11!41;UBERON:0001890!1.31e-11!41;UBERON:0006240!1.31e-11!41;UBERON:0002346!3.46e-10!90;UBERON:0003075!1.17e-09!86;UBERON:0007284!1.17e-09!86;UBERON:0002020!1.44e-09!34;UBERON:0003528!1.44e-09!34;UBERON:0001893!4.59e-09!34;UBERON:0002791!1.01e-08!33;UBERON:0001869!2.03e-08!32;UBERON:0000956!2.46e-08!25;UBERON:0000203!2.46e-08!25;UBERON:0003056!3.26e-08!61;UBERON:0002619!6.43e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.89e-11;2!UBERON:0000941;4.32e-07;1!UBERON:0001785;4.32e-07;1!UBERON:0002464;4.32e-07;1!UBERON:0004904;4.32e-07;1!UBERON:0001021;4.32e-07;1!UBERON:0001000;5.73e-07;1!UBERON:0005352;5.73e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,9.48e-12,2;UBERON:0000941,4.58e-07,1;UBERON:0001785,4.58e-07,1;UBERON:0002464,4.58e-07,1;UBERON:0004904,4.58e-07,1;UBERON:0001021,4.58e-07,1;UBERON:0003902,4.58e-07,1;UBERON:0005425,4.58e-07,1;UBERON:0002780,6.60e-07,41;UBERON:0001890,6.60e-07,41;UBERON:0003080,6.60e-07,41;UBERON:0006240,6.60e-07,41;UBERON:0001000,6.80e-07,1;UBERON:0005352,6.80e-07,1;UBERON:0002038,9.48e-07,1;UBERON:0009661,9.48e-07,1;UBERON:0002950,9.48e-07,1;UBERON:0001891,9.48e-07,1;UBERON:0009616,9.48e-07,1;UBERON:0010286,9.48e-07,1 | |||
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| |||
|short_description=p2@PKD2 | |||
}} |
Revision as of 12:15, 13 September 2013
Short description: | p2@PKD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PKD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -405bp_to_ENST00000502363_5end |
EntrezGene: | PKD2 |
HGNC: | 9009 |
UniProt: | B4DFN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 6.41e-14 | 6 |
sensory epithelial cell | 6.41e-14 | 6 |
olfactory epithelial cell | 6.41e-14 | 6 |
perirenal adipocyte cell | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 9.48e-12 | 2 |
cranial nerve II | 4.58e-07 | 1 |
cranial nerve | 4.58e-07 | 1 |
nerve trunk | 4.58e-07 | 1 |
nerve connecting eye with brain | 4.58e-07 | 1 |
nerve | 4.58e-07 | 1 |
retinal neural layer | 4.58e-07 | 1 |
presumptive neural retina | 4.58e-07 | 1 |
regional part of forebrain | 6.60e-07 | 41 |
forebrain | 6.60e-07 | 41 |
anterior neural tube | 6.60e-07 | 41 |
future forebrain | 6.60e-07 | 41 |
vas deferens | 6.80e-07 | 1 |
spermatic cord | 6.80e-07 | 1 |
substantia nigra | 9.48e-07 | 1 |
midbrain nucleus | 9.48e-07 | 1 |
regional part of midbrain | 9.48e-07 | 1 |
midbrain | 9.48e-07 | 1 |
presumptive midbrain | 9.48e-07 | 1 |
midbrain neural tube | 9.48e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.