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FFCP PHASE1:Mm9::chr16:16303111..16303122,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=70120|HGNC=|MCL_coexpression_id=7|UniProt=|association_with_transcript=36bp_to_uc007yih.1_5end|description=CAGE_peak_3_at_Yars2_5end|id=chr16:16303111..16303122,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000893,2.58e-09,6;CL:0002489,2.58e-09,6;CL:0000898,2.58e-09,6;CL:0000809,2.58e-09,6;CL:0000810,2.58e-09,6;CL:0000895,2.58e-09,6;CL:0000808,2.58e-09,6;CL:0000894,2.58e-09,6;CL:0000806,2.58e-09,6;CL:0000807,2.58e-09,6;CL:0000805,2.58e-09,6;CL:0002425,2.58e-09,6;CL:0002436,2.58e-09,6;CL:0002427,2.58e-09,6;CL:0002428,2.58e-09,6;CL:0002429,2.58e-09,6;CL:0002433,2.58e-09,6;CL:0002431,2.58e-09,6;CL:0002432,2.58e-09,6;CL:0000542,1.21e-08,13;CL:0000051,1.21e-08,13;CL:0000084,1.97e-07,11;CL:0000827,1.97e-07,11;CL:0000624,5.68e-07,8;CL:0000838,8.85e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0.233612640595526,0,5.20918271961167,4.91535505276186,1.88339765048055,2.31339261086476,0.342401459862411,0.174840804837995,0,0.202475267389826,0.699561878128147,0,0.411343300817216,0.42438965179803,0.255129870453209,0.992909512008853,1.30599894569468,0.319984845586813,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0,0,0,1.27006134691926,0.61506478758457,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0.405507724878058,0.367093504323363,0,0.436050312760893,0.219686182734472,0.388859798148567,0,0,0.167782606057736,0,0.672187598284928,0,0,0,0.404632921719196,0,1.90149421051854,0.677689064138264,0.889294796111139,0,0,0,0,0.384218305321555,0.311068836925433,0.405017814995072,0.420649922702764,0.856952953211411,0.883474163806454,0.367472397644862,0.383381884072945,0,0,0.255374676170375,0.307213066512487,0.527545150920775,0.274462930807229,0.52091337055676,1.11673199600552,0,0.15279824777681,0.294628585473668,0.284743361598206,0.745597783301202,0.681535739998656,0.0755715601067855,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0.519572009205738,0,0.704217098883403,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0,0,0,1.04091196059682,0,0.922461989024234,0.60289056221049,0.352766121407114,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0.41889341362691,0.255457055208591,1.07833612055328,1.19980546198682,0.762421362438388,0.599162557619291,0,0.753926112677186,0.695297280769106,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0.252722758433675,0,0.780722657776222,1.14951052216736,0.180062129805349,0.150704817835715,0.884474488967262,0.384341160854549,0.562210347358373,0.258703370739016,0.431135985865684,0.378212160335639,1.05570674498369,1.53437012699302,0.278047249225598,0,0.61734640922383,0.796137067273973,0.702213187313235,0.772043721344145,0.284163499395593,0.828503090142008,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,0.462801338662135,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.405344047729279,0.292399974850665,0,0,0.420579897128254,0.514523061896422,0,0,1.2797295032114,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0.799739588268102,1.1270773567308,0.407302655690628,0.193952487167626,0.631222379012867,0.379419222745544,0.295220295959204,0.31399745568275,0.123397163921801,0,0.333690211432188,0.786235980452812,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.575392274901621,0.648540907100142,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.184753190166605,1.32643988239339,0.488894929326078,0.509235257325564,0,0.502518772325447,0,0.780534591431195,0,0,0.159454768657487,0,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,0.481651769963376,0.468846746368813,0.491804836130026,0.252470927204373,1.26203287766503,0.780877488593277,0.646270193198397,0.716906393857656,0.668396022247182,0,0.809621403349789,0,1.18586333383957,0.321321316421807,0.425820255624806,0.178065603667255,0.81443479676788,0.164970122972535,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0,0.775284879504663,0,0.356497378384721,0,1.05418608574999,0,0.340439605753788,0.720244376125241,0.258717367565509,0.857348140126369,0.177340233642274,0.535106452806212,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0,0.322928853391811,0.603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0.410082683163076,0.686334519619568,0,0,0.276399947608848,0,0,1.21991680276109,0.648032044930808,0.209088296014469,0,0.269728692769641,0.247960367176008,0,0,0,0,0.897099276263873,1.15820943319968,0,0.387479470433193,0.844780627453891,0.117357238645754,1.3020438484395,0.943734099831398,0.724752362478018,0.576060012515731,0,0.608175645870493,1.1298205288131,0.389762468933385,0.895133478337407,0.198681354781265,0.961563596159751,0.443068581523732,0.605798699688886,0.609654453239999,0.100826185136841,0.292373642219257,0.288635524920988,0.233753804363138,0.226730383615211,0.443971906748129,0.538283139656854,0.671538465456314,0,0,0.36630324853453,0.214368379079066,0.501572104035363,0,1.38097570952153,1.14579102687879,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,1.14166082342594,0.399024873401031,1.70733605754134,0.729320151204882,0,0.735374033800057,0.44449345560323,0.206035057238894,1.28367683836726,0.505394423527595,0.50695859978048,0.565879024158229,0.842773567228942,0.512201219238954,0.34461281373368,0,0.463537303779422,0.964546102318525,0,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.376437521661322,0.507687647350059,0.182927972872773,0,0.814824683075171,0,0.118635018124174,0.394017929502254,1.63692417267876,0.464810523557898,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p3@Yars2}}
|EntrezGene=70120
|HGNC=
|MCL_coexpression_id=7
|UniProt=
|association_with_transcript=36bp_to_uc007yih.1_5end
|description=CAGE_peak_3_at_Yars2_5end
|id=chr16:16303111..16303122,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000893,2.58e-09,6;CL:0002489,2.58e-09,6;CL:0000898,2.58e-09,6;CL:0000809,2.58e-09,6;CL:0000810,2.58e-09,6;CL:0000895,2.58e-09,6;CL:0000808,2.58e-09,6;CL:0000894,2.58e-09,6;CL:0000806,2.58e-09,6;CL:0000807,2.58e-09,6;CL:0000805,2.58e-09,6;CL:0002425,2.58e-09,6;CL:0002436,2.58e-09,6;CL:0002427,2.58e-09,6;CL:0002428,2.58e-09,6;CL:0002429,2.58e-09,6;CL:0002433,2.58e-09,6;CL:0002431,2.58e-09,6;CL:0002432,2.58e-09,6;CL:0000542,1.21e-08,13;CL:0000051,1.21e-08,13;CL:0000084,1.97e-07,11;CL:0000827,1.97e-07,11;CL:0000624,5.68e-07,8;CL:0000838,8.85e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0.233612640595526,0,5.20918271961167,4.91535505276186,1.88339765048055,2.31339261086476,0.342401459862411,0.174840804837995,0,0.202475267389826,0.699561878128147,0,0.411343300817216,0.42438965179803,0.255129870453209,0.992909512008853,1.30599894569468,0.319984845586813,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0,0,0,1.27006134691926,0.61506478758457,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0.405507724878058,0.367093504323363,0,0.436050312760893,0.219686182734472,0.388859798148567,0,0,0.167782606057736,0,0.672187598284928,0,0,0,0.404632921719196,0,1.90149421051854,0.677689064138264,0.889294796111139,0,0,0,0,0.384218305321555,0.311068836925433,0.405017814995072,0.420649922702764,0.856952953211411,0.883474163806454,0.367472397644862,0.383381884072945,0,0,0.255374676170375,0.307213066512487,0.527545150920775,0.274462930807229,0.52091337055676,1.11673199600552,0,0.15279824777681,0.294628585473668,0.284743361598206,0.745597783301202,0.681535739998656,0.0755715601067855,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0.519572009205738,0,0.704217098883403,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0,0,0,1.04091196059682,0,0.922461989024234,0.60289056221049,0.352766121407114,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0.41889341362691,0.255457055208591,1.07833612055328,1.19980546198682,0.762421362438388,0.599162557619291,0,0.753926112677186,0.695297280769106,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0.252722758433675,0,0.780722657776222,1.14951052216736,0.180062129805349,0.150704817835715,0.884474488967262,0.384341160854549,0.562210347358373,0.258703370739016,0.431135985865684,0.378212160335639,1.05570674498369,1.53437012699302,0.278047249225598,0,0.61734640922383,0.796137067273973,0.702213187313235,0.772043721344145,0.284163499395593,0.828503090142008,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,0.462801338662135,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.405344047729279,0.292399974850665,0,0,0.420579897128254,0.514523061896422,0,0,1.2797295032114,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0.799739588268102,1.1270773567308,0.407302655690628,0.193952487167626,0.631222379012867,0.379419222745544,0.295220295959204,0.31399745568275,0.123397163921801,0,0.333690211432188,0.786235980452812,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.575392274901621,0.648540907100142,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.184753190166605,1.32643988239339,0.488894929326078,0.509235257325564,0,0.502518772325447,0,0.780534591431195,0,0,0.159454768657487,0,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,0.481651769963376,0.468846746368813,0.491804836130026,0.252470927204373,1.26203287766503,0.780877488593277,0.646270193198397,0.716906393857656,0.668396022247182,0,0.809621403349789,0,1.18586333383957,0.321321316421807,0.425820255624806,0.178065603667255,0.81443479676788,0.164970122972535,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0,0.775284879504663,0,0.356497378384721,0,1.05418608574999,0,0.340439605753788,0.720244376125241,0.258717367565509,0.857348140126369,0.177340233642274,0.535106452806212,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0,0.322928853391811,0.603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0.410082683163076,0.686334519619568,0,0,0.276399947608848,0,0,1.21991680276109,0.648032044930808,0.209088296014469,0,0.269728692769641,0.247960367176008,0,0,0,0,0.897099276263873,1.15820943319968,0,0.387479470433193,0.844780627453891,0.117357238645754,1.3020438484395,0.943734099831398,0.724752362478018,0.576060012515731,0,0.608175645870493,1.1298205288131,0.389762468933385,0.895133478337407,0.198681354781265,0.961563596159751,0.443068581523732,0.605798699688886,0.609654453239999,0.100826185136841,0.292373642219257,0.288635524920988,0.233753804363138,0.226730383615211,0.443971906748129,0.538283139656854,0.671538465456314,0,0,0.36630324853453,0.214368379079066,0.501572104035363,0,1.38097570952153,1.14579102687879,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,1.14166082342594,0.399024873401031,1.70733605754134,0.729320151204882,0,0.735374033800057,0.44449345560323,0.206035057238894,1.28367683836726,0.505394423527595,0.50695859978048,0.565879024158229,0.842773567228942,0.512201219238954,0.34461281373368,0,0.463537303779422,0.964546102318525,0,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.376437521661322,0.507687647350059,0.182927972872773,0,0.814824683075171,0,0.118635018124174,0.394017929502254,1.63692417267876,0.464810523557898,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421
|short_description=p3@Yars2
}}

Revision as of 12:01, 13 September 2013

Short description:p3@Yars2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Yars2_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 36bp_to_uc007yih.1_5end
EntrezGene:Yars2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Yars2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
thymocyte2.58e-096
double negative thymocyte2.58e-096
naive T cell2.58e-096
double-positive, alpha-beta thymocyte2.58e-096
CD4-positive, alpha-beta thymocyte2.58e-096
naive thymus-derived CD4-positive, alpha-beta T cell2.58e-096
DN4 thymocyte2.58e-096
DN1 thymic pro-T cell2.58e-096
DN2 thymocyte2.58e-096
DN3 thymocyte2.58e-096
immature single positive thymocyte2.58e-096
early T lineage precursor2.58e-096
mature CD4 single-positive thymocyte2.58e-096
resting double-positive thymocyte2.58e-096
double-positive blast2.58e-096
CD69-positive double-positive thymocyte2.58e-096
CD69-positive, CD4-positive single-positive thymocyte2.58e-096
CD4-positive, CD8-intermediate double-positive thymocyte2.58e-096
CD24-positive, CD4 single-positive thymocyte2.58e-096
lymphocyte1.21e-0813
common lymphoid progenitor1.21e-0813
T cell1.97e-0711
pro-T cell1.97e-0711
CD4-positive, alpha-beta T cell5.68e-078
lymphoid lineage restricted progenitor cell8.85e-0712







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