FFCP PHASE1:Hg19::chr4:82392981..82392999,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=153020|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24881|TSSclassifier=S|UniProt=Q8N437|association_with_transcript=44bp_to_ENST00000395570,ENST00000436139_5end|description=CAGE_peak_3_at_RASGEF1B_5end|id=chr4:82392981..82392999,-|ontology_enrichment_celltype=CL:0000738!5.33e-43!140;CL:0002031!1.41e-36!124;CL:0002087!1.40e-34!119;CL:0000037!3.38e-32!172;CL:0000566!3.38e-32!172;CL:0000557!1.26e-31!71;CL:0002057!7.24e-31!42;CL:0000766!2.91e-30!76;CL:0000988!1.67e-29!182;CL:0000839!2.52e-29!70;CL:0002009!2.36e-28!65;CL:0002032!3.42e-28!165;CL:0000837!3.42e-28!165;CL:0000860!3.87e-27!45;CL:0002194!8.68e-27!63;CL:0000576!8.68e-27!63;CL:0000040!8.68e-27!63;CL:0000559!8.68e-27!63;CL:0000763!6.28e-20!112;CL:0000049!6.28e-20!112;CL:0002393!1.51e-08!9;CL:0002397!1.51e-08!9;CL:0000542!6.98e-08!53;CL:0000051!6.98e-08!53;CL:0000838!1.12e-07!52|ontology_enrichment_celltype_v019=CL:0000860;5.62e-32;33!CL:0002057;5.62e-32;33!CL:0000473;4.33e-30;39!CL:0000234;4.33e-30;39!CL:0000576;6.93e-26;48!CL:0000766;3.75e-22;69!CL:0002087;3.94e-14;104!CL:0000738;2.63e-11;136!CL:0000763;4.75e-09;100!CL:0002393;1.02e-08;6!CL:0002397;1.02e-08;6!CL:0000791;2.15e-07;18!CL:0000789;2.15e-07;18!CL:0002419;2.15e-07;18!CL:0000988;3.14e-07;177!CL:0000624;9.70e-07;6|ontology_enrichment_celltype_v019_2=CL:0000738,4.01e-56,136;CL:0000473,2.83e-50,48;CL:0000234,2.83e-50,48;CL:0000557,1.17e-47,67;CL:0002031,2.06e-47,120;CL:0000766,1.39e-46,72;CL:0000860,6.49e-46,42;CL:0002057,6.49e-46,42;CL:0002087,1.02e-45,115;CL:0002009,8.25e-44,61;CL:0000839,2.57e-42,66;CL:0000037,2.65e-42,168;CL:0002194,2.19e-41,59;CL:0000576,2.19e-41,59;CL:0000040,2.19e-41,59;CL:0000559,2.19e-41,59;CL:0000988,2.25e-39,177;CL:0002032,1.62e-36,161;CL:0000837,1.62e-36,161;CL:0000763,2.58e-29,108;CL:0000049,2.58e-29,108;CL:0002393,4.11e-12,9;CL:0002397,4.11e-12,9;CL:0000134,5.41e-10,354;CL:0002320,3.02e-09,361;CL:0000219,1.24e-08,386;CL:0000838,1.49e-07,52;CL:0000791,2.80e-07,18;CL:0000789,2.80e-07,18;CL:0002420,2.80e-07,18;CL:0002419,2.80e-07,18;CL:0000790,2.80e-07,18;CL:0000542,2.85e-07,53;CL:0000051,2.85e-07,53|ontology_enrichment_development_v019=CL:0002057;8.55e-33;42!CL:0000049;2.63e-08;108!CL:0000790;2.15e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.81e-30!102;UBERON:0003061!5.81e-30!102;UBERON:0002371!8.67e-27!80;UBERON:0002193!2.15e-25!112;UBERON:0001474!8.56e-24!86;UBERON:0002405!1.23e-20!115;UBERON:0004765!1.09e-17!101;UBERON:0001434!1.09e-17!101;UBERON:0007023!8.99e-15!115;UBERON:0001893!3.86e-07!34;UBERON:0002791!5.02e-07!33;UBERON:0002020!5.55e-07!34;UBERON:0003528!5.55e-07!34;UBERON:0003080!5.78e-07!42;UBERON:0005743!5.89e-07!86;UBERON:0001869!6.91e-07!32;UBERON:0001049!7.35e-07!57;UBERON:0005068!7.35e-07!57;UBERON:0006241!7.35e-07!57;UBERON:0007135!7.35e-07!57;UBERON:0001017!8.08e-07!82;UBERON:0002780!8.45e-07!41;UBERON:0001890!8.45e-07!41;UBERON:0006240!8.45e-07!41|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.90e-42,76;UBERON:0002390,5.44e-41,98;UBERON:0003061,5.44e-41,98;UBERON:0001474,1.16e-37,82;UBERON:0002405,1.12e-36,93;UBERON:0002193,7.28e-36,108;UBERON:0004765,2.64e-32,90;UBERON:0001434,5.02e-28,100;UBERON:0003081,8.16e-11,203;UBERON:0002204,9.03e-11,167;UBERON:0002384,5.57e-09,371|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,69.2321127254071,62.5641918898457,119.827679446643,0,0,0.369754010166788,0.697204805222715,0.995184627411951,6.16560922603179,166.752617968095,156.02358013177,127.819402851637,1.11957737119962,2.59114932815184,0.77272670290256,6.54292074508041,12.8477820854195,8.49044214157357,31.8427780560788,48.9289786745973,51.1015511976921,39.4138577481346,40.729552338127,64.5596487595838,76.1887954427927,78.7491313972268,82.6101568225485,18.07126459609,22.3783043047434,30.1129469156413,78.3574764469511,74.1346052545776,95.2612317440571,2.96866170168044,19.3479747892983,16.1965405202424,30.4719700560013,20.9932533135722,34.2552236947566,27.1348558477283,47.9764284946585,47.1299793010103,29.0591761264017,37.5643188707316,46.8364333412509,54.292608582169,91.6324532849338,74.8481364464902,20.8931253932481,29.5848478897767,27.9662520852919,72.1082241665359,70.8143370828761,67.9510652004438,3.51992488922645,2.18455444504853,0,3.84057200309856,0.400395987036012,2.87376219977242,1.32208974556972,1.90810750907073,50.0907412816315,76.340834618222,65.7509952375394,34.3645454305467,65.5795018688397,3.423993102076,21.4413649424078,19.2575273747091,21.1769543969494,0,17.2738801315803,17.0441210064504,17.534405556712,0,2.3568472597987,1.10766947291811,1.08321545506006,0.128091319725675,0.130059347559878,0.328875809207352,0,0.289803085735052,21.5015516584988,22.4734295595359,19.8617495229456,0,12.6462762888634,9.27794102803101,6.83153168452658,0.637130828648193,0,0,4.36667845325541,1.15187950038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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=153020 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24881 | |||
|TSSclassifier=S | |||
|UniProt=Q8N437 | |||
|association_with_transcript=44bp_to_ENST00000395570,ENST00000436139_5end | |||
|description=CAGE_peak_3_at_RASGEF1B_5end | |||
|id=chr4:82392981..82392999,- | |||
|ontology_enrichment_celltype=CL:0000738!5.33e-43!140;CL:0002031!1.41e-36!124;CL:0002087!1.40e-34!119;CL:0000037!3.38e-32!172;CL:0000566!3.38e-32!172;CL:0000557!1.26e-31!71;CL:0002057!7.24e-31!42;CL:0000766!2.91e-30!76;CL:0000988!1.67e-29!182;CL:0000839!2.52e-29!70;CL:0002009!2.36e-28!65;CL:0002032!3.42e-28!165;CL:0000837!3.42e-28!165;CL:0000860!3.87e-27!45;CL:0002194!8.68e-27!63;CL:0000576!8.68e-27!63;CL:0000040!8.68e-27!63;CL:0000559!8.68e-27!63;CL:0000763!6.28e-20!112;CL:0000049!6.28e-20!112;CL:0002393!1.51e-08!9;CL:0002397!1.51e-08!9;CL:0000542!6.98e-08!53;CL:0000051!6.98e-08!53;CL:0000838!1.12e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.62e-32;33!CL:0002057;5.62e-32;33!CL:0000473;4.33e-30;39!CL:0000234;4.33e-30;39!CL:0000576;6.93e-26;48!CL:0000766;3.75e-22;69!CL:0002087;3.94e-14;104!CL:0000738;2.63e-11;136!CL:0000763;4.75e-09;100!CL:0002393;1.02e-08;6!CL:0002397;1.02e-08;6!CL:0000791;2.15e-07;18!CL:0000789;2.15e-07;18!CL:0002419;2.15e-07;18!CL:0000988;3.14e-07;177!CL:0000624;9.70e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.01e-56,136;CL:0000473,2.83e-50,48;CL:0000234,2.83e-50,48;CL:0000557,1.17e-47,67;CL:0002031,2.06e-47,120;CL:0000766,1.39e-46,72;CL:0000860,6.49e-46,42;CL:0002057,6.49e-46,42;CL:0002087,1.02e-45,115;CL:0002009,8.25e-44,61;CL:0000839,2.57e-42,66;CL:0000037,2.65e-42,168;CL:0002194,2.19e-41,59;CL:0000576,2.19e-41,59;CL:0000040,2.19e-41,59;CL:0000559,2.19e-41,59;CL:0000988,2.25e-39,177;CL:0002032,1.62e-36,161;CL:0000837,1.62e-36,161;CL:0000763,2.58e-29,108;CL:0000049,2.58e-29,108;CL:0002393,4.11e-12,9;CL:0002397,4.11e-12,9;CL:0000134,5.41e-10,354;CL:0002320,3.02e-09,361;CL:0000219,1.24e-08,386;CL:0000838,1.49e-07,52;CL:0000791,2.80e-07,18;CL:0000789,2.80e-07,18;CL:0002420,2.80e-07,18;CL:0002419,2.80e-07,18;CL:0000790,2.80e-07,18;CL:0000542,2.85e-07,53;CL:0000051,2.85e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;8.55e-33;42!CL:0000049;2.63e-08;108!CL:0000790;2.15e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.81e-30!102;UBERON:0003061!5.81e-30!102;UBERON:0002371!8.67e-27!80;UBERON:0002193!2.15e-25!112;UBERON:0001474!8.56e-24!86;UBERON:0002405!1.23e-20!115;UBERON:0004765!1.09e-17!101;UBERON:0001434!1.09e-17!101;UBERON:0007023!8.99e-15!115;UBERON:0001893!3.86e-07!34;UBERON:0002791!5.02e-07!33;UBERON:0002020!5.55e-07!34;UBERON:0003528!5.55e-07!34;UBERON:0003080!5.78e-07!42;UBERON:0005743!5.89e-07!86;UBERON:0001869!6.91e-07!32;UBERON:0001049!7.35e-07!57;UBERON:0005068!7.35e-07!57;UBERON:0006241!7.35e-07!57;UBERON:0007135!7.35e-07!57;UBERON:0001017!8.08e-07!82;UBERON:0002780!8.45e-07!41;UBERON:0001890!8.45e-07!41;UBERON:0006240!8.45e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.90e-42,76;UBERON:0002390,5.44e-41,98;UBERON:0003061,5.44e-41,98;UBERON:0001474,1.16e-37,82;UBERON:0002405,1.12e-36,93;UBERON:0002193,7.28e-36,108;UBERON:0004765,2.64e-32,90;UBERON:0001434,5.02e-28,100;UBERON:0003081,8.16e-11,203;UBERON:0002204,9.03e-11,167;UBERON:0002384,5.57e-09,371 | |||
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| |||
|short_description=p3@RASGEF1B | |||
}} |
Revision as of 11:59, 13 September 2013
Short description: | p3@RASGEF1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RASGEF1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000395570, ENST00000436139_5end |
EntrezGene: | RASGEF1B |
HGNC: | 24881 |
UniProt: | Q8N437 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.90e-42 | 76 |
hematopoietic system | 5.44e-41 | 98 |
blood island | 5.44e-41 | 98 |
bone element | 1.16e-37 | 82 |
immune system | 1.12e-36 | 93 |
hemolymphoid system | 7.28e-36 | 108 |
skeletal element | 2.64e-32 | 90 |
skeletal system | 5.02e-28 | 100 |
lateral plate mesoderm | 8.16e-11 | 203 |
musculoskeletal system | 9.03e-11 | 167 |
connective tissue | 5.57e-09 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.