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FFCP PHASE1:Mm9::chr15:97536218..97536273,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=71919|HGNC=|MCL_coexpression_id=52|UniProt=Q9D706|association_with_transcript=0bp_to_ENSMUST00000023104,NM_028003,uc007xkv.1_5end|description=CAGE_peak_1_at_Rpap3_5end|id=chr15:97536218..97536273,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!4.02e-12!86;UBERON:0000153!1.38e-11!94;UBERON:0000033!2.37e-08!63;UBERON:0003056!2.61e-08!49;UBERON:0000955!1.46e-07!50;UBERON:0006238!1.46e-07!50;UBERON:0002346!1.71e-07!71;UBERON:0003075!1.71e-07!71;UBERON:0007284!1.71e-07!71;UBERON:0002616!2.55e-07!49;UBERON:0001049!4.17e-07!52;UBERON:0005068!4.17e-07!52;UBERON:0006241!4.17e-07!52;UBERON:0007135!4.17e-07!52;UBERON:0003080!6.05e-07!40;UBERON:0000475!7.68e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.66e-08,73;UBERON:0003056,2.61e-08,49;UBERON:0002346,3.80e-08,64;UBERON:0003075,3.80e-08,64;UBERON:0007284,3.80e-08,64;UBERON:0010314,1.11e-07,92;UBERON:0000073,3.47e-07,54;UBERON:0001049,4.17e-07,52;UBERON:0005068,4.17e-07,52;UBERON:0006241,4.17e-07,52;UBERON:0007135,4.17e-07,52;UBERON:0000955,4.63e-07,47;UBERON:0006238,4.63e-07,47;UBERON:0003080,6.05e-07,40;UBERON:0002616,8.03e-07,46|phase1_expression=18.7374151112609,2.44282785347553,2.72999543633722,4.83942738090928,3.00537437967808,10.2406355866253,10.2789561862031,16.0112921067555,6.89864738543167,6.55380673701582,25.5114772656002,29.0370658743025,11.1280474455284,12.8507991555926,16.6554880907831,16.4004966585759,10.4934281719222,16.8772258466657,17.1393042007173,9.76096199135469,16.1582251287033,16.3830069481461,15.9331871374751,6.55968933452967,6.8822784320151,3.44539178469012,4.30761996159075,5.817723282519,7.79096019771133,7.30887376303799,5.54326276638262,6.35030673459631,4.92051830067656,0,13.8648777480612,10.6390173029435,15.5168710759401,0.837063261473815,6.2506827561904,4.18818995179039,1.17646297606203,3.41522742479223,4.36959317728038,27.4455063186758,27.3717714292689,26.6142790634438,1.56478268869608,4.79655344036982,5.71184075109627,4.27745777963423,6.43937539476668,10.062679505548,10.5703041816374,16.6833292662609,10.7550015725588,11.3194151855817,9.74213695791773,4.64104883049698,14.7691016427506,14.8117474196169,15.8457850876545,4.06613438482959,2.66788438833342,3.1496490104849,2.96659908770092,4.2628806896766,3.29560121570245,4.2264013585371,18.8715094401429,14.5806413398226,18.2982716375702,13.139945282575,13.693849539,18.4961106814581,19.9358579717932,20.2228133054205,16.5173821499083,24.0052195600153,22.4265538554115,16.8814448294648,18.3890163640843,22.3992749339407,25.4056529091257,18.5711661310454,20.3221669543157,21.5078867395777,23.9184423742493,17.8943467992289,12.1161909333094,14.81202578093,15.9425468785923,7.74381489283248,8.15965600449301,5.93673510801599,9.74664626171504,16.1289679355041,18.3982190372595,22.3263722577256,23.3807404142582,18.726997449048,10.8449433228044,24.3820307087204,63.7013099266614,99.5493384414664,14.9378818297738,17.2284708523067,14.6602089054287,12.2176751299394,16.572024553419,17.9614988268438,16.8280766963152,13.7009465240464,11.3001593655469,15.976599898578,19.6373140916627,18.8499886994513,7.16865406429684,14.749134405831,10.6153266233985,16.985519244478,13.0296495891632,17.9403843660032,9.31958806090611,19.9090941967852,20.5257772677186,8.17462576667492,17.972268675888,17.3971791988088,17.1544806548637,27.5614776504874,26.5350349634803,33.5497120141348,23.292458905765,26.0829766476937,20.1554403222773,21.9025705141473,25.76535905413,14.9288364732112,20.7232661915613,19.3606507415556,21.7301139747715,13.5642241615749,17.4660265911189,21.0986744970001,22.1118622241816,23.5729245324124,21.3639931996182,25.6116337031625,21.3412313003514,15.5066985737612,19.5305747821983,13.1517439456545,20.019401944243,16.0195996600197,13.9931852757402,23.4860434845822,26.6841011179029,24.7053990830127,19.3231179589003,16.3629360303046,20.8728193383176,20.3470129450947,17.0456209621351,18.2990735525086,16.0437797402873,22.0907247512887,17.7060444923749,20.4339349142547,24.8485373369356,16.2525789438304,20.5104088151015,20.4679982395465,23.0527621055603,19.0573114639728,18.7158054222073,30.9742883261646,5.61711931072457,8.46241813323342,22.6085545567348,22.9914305141834,18.0414445850931,14.117846723634,10.6741461045538,10.8428606884159,8.0669940462567,9.88193728344065,10.0534083520108,14.3248659869629,11.5028811400281,14.3811105384675,9.94235029423593,8.56307474993779,15.1734320762465,23.5351935976041,23.6686244913469,26.2710212920455,20.752916126936,24.1968578621599,20.0459822683896,20.3702004211851,21.1948282585856,17.7691916047393,8.89357881261447,15.8502850430289,17.6903095601883,13.0420025183215,16.6345299538572,14.470629585145,7.89340140522401,14.0971107350897,14.2678999562031,6.58947391651396,10.0637744569148,9.30352369171258,11.2333562321242,13.639259409144,16.6839594575378,9.16642690590398,14.041242452662,19.3281240005894,18.578007314391,23.0853316654256,23.7037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|EntrezGene=71919
|HGNC=
|MCL_coexpression_id=52
|UniProt=Q9D706
|association_with_transcript=0bp_to_ENSMUST00000023104,NM_028003,uc007xkv.1_5end
|description=CAGE_peak_1_at_Rpap3_5end
|id=chr15:97536218..97536273,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!4.02e-12!86;UBERON:0000153!1.38e-11!94;UBERON:0000033!2.37e-08!63;UBERON:0003056!2.61e-08!49;UBERON:0000955!1.46e-07!50;UBERON:0006238!1.46e-07!50;UBERON:0002346!1.71e-07!71;UBERON:0003075!1.71e-07!71;UBERON:0007284!1.71e-07!71;UBERON:0002616!2.55e-07!49;UBERON:0001049!4.17e-07!52;UBERON:0005068!4.17e-07!52;UBERON:0006241!4.17e-07!52;UBERON:0007135!4.17e-07!52;UBERON:0003080!6.05e-07!40;UBERON:0000475!7.68e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.66e-08,73;UBERON:0003056,2.61e-08,49;UBERON:0002346,3.80e-08,64;UBERON:0003075,3.80e-08,64;UBERON:0007284,3.80e-08,64;UBERON:0010314,1.11e-07,92;UBERON:0000073,3.47e-07,54;UBERON:0001049,4.17e-07,52;UBERON:0005068,4.17e-07,52;UBERON:0006241,4.17e-07,52;UBERON:0007135,4.17e-07,52;UBERON:0000955,4.63e-07,47;UBERON:0006238,4.63e-07,47;UBERON:0003080,6.05e-07,40;UBERON:0002616,8.03e-07,46
|phase1_expression=18.7374151112609,2.44282785347553,2.72999543633722,4.83942738090928,3.00537437967808,10.2406355866253,10.2789561862031,16.0112921067555,6.89864738543167,6.55380673701582,25.5114772656002,29.0370658743025,11.1280474455284,12.8507991555926,16.6554880907831,16.4004966585759,10.4934281719222,16.8772258466657,17.1393042007173,9.76096199135469,16.1582251287033,16.3830069481461,15.9331871374751,6.55968933452967,6.8822784320151,3.44539178469012,4.30761996159075,5.817723282519,7.79096019771133,7.30887376303799,5.54326276638262,6.35030673459631,4.92051830067656,0,13.8648777480612,10.6390173029435,15.5168710759401,0.837063261473815,6.2506827561904,4.18818995179039,1.17646297606203,3.41522742479223,4.36959317728038,27.4455063186758,27.3717714292689,26.6142790634438,1.56478268869608,4.79655344036982,5.71184075109627,4.27745777963423,6.43937539476668,10.062679505548,10.5703041816374,16.6833292662609,10.7550015725588,11.3194151855817,9.74213695791773,4.64104883049698,14.7691016427506,14.8117474196169,15.8457850876545,4.06613438482959,2.66788438833342,3.1496490104849,2.96659908770092,4.2628806896766,3.29560121570245,4.2264013585371,18.8715094401429,14.5806413398226,18.2982716375702,13.139945282575,13.693849539,18.4961106814581,19.9358579717932,20.2228133054205,16.5173821499083,24.0052195600153,22.4265538554115,16.8814448294648,18.3890163640843,22.3992749339407,25.4056529091257,18.5711661310454,20.3221669543157,21.5078867395777,23.9184423742493,17.8943467992289,12.1161909333094,14.81202578093,15.9425468785923,7.74381489283248,8.15965600449301,5.93673510801599,9.74664626171504,16.1289679355041,18.3982190372595,22.3263722577256,23.3807404142582,18.726997449048,10.8449433228044,24.3820307087204,63.7013099266614,99.5493384414664,14.9378818297738,17.2284708523067,14.6602089054287,12.2176751299394,16.572024553419,17.9614988268438,16.8280766963152,13.7009465240464,11.3001593655469,15.976599898578,19.6373140916627,18.8499886994513,7.16865406429684,14.749134405831,10.6153266233985,16.985519244478,13.0296495891632,17.9403843660032,9.31958806090611,19.9090941967852,20.5257772677186,8.17462576667492,17.972268675888,17.3971791988088,17.1544806548637,27.5614776504874,26.5350349634803,33.5497120141348,23.292458905765,26.0829766476937,20.1554403222773,21.9025705141473,25.76535905413,14.9288364732112,20.7232661915613,19.3606507415556,21.7301139747715,13.5642241615749,17.4660265911189,21.0986744970001,22.1118622241816,23.5729245324124,21.3639931996182,25.6116337031625,21.3412313003514,15.5066985737612,19.5305747821983,13.1517439456545,20.019401944243,16.0195996600197,13.9931852757402,23.4860434845822,26.6841011179029,24.7053990830127,19.3231179589003,16.3629360303046,20.8728193383176,20.3470129450947,17.0456209621351,18.2990735525086,16.0437797402873,22.0907247512887,17.7060444923749,20.4339349142547,24.8485373369356,16.2525789438304,20.5104088151015,20.4679982395465,23.0527621055603,19.0573114639728,18.7158054222073,30.9742883261646,5.61711931072457,8.46241813323342,22.6085545567348,22.9914305141834,18.0414445850931,14.117846723634,10.6741461045538,10.8428606884159,8.0669940462567,9.88193728344065,10.0534083520108,14.3248659869629,11.5028811400281,14.3811105384675,9.94235029423593,8.56307474993779,15.1734320762465,23.5351935976041,23.6686244913469,26.2710212920455,20.752916126936,24.1968578621599,20.0459822683896,20.3702004211851,21.1948282585856,17.7691916047393,8.89357881261447,15.8502850430289,17.6903095601883,13.0420025183215,16.6345299538572,14.470629585145,7.89340140522401,14.0971107350897,14.2678999562031,6.58947391651396,10.0637744569148,9.30352369171258,11.2333562321242,13.639259409144,16.6839594575378,9.16642690590398,14.041242452662,19.3281240005894,18.578007314391,23.0853316654256,23.7037150771387,17.0856382590652,13.5684875305028,13.0739544064725,20.1772984455924,21.9250042752287,20.0913008508434,18.0249646187312,19.3407179689803,13.7416605652436,9.04747703635634,4.89515115436839,9.34352118736169,13.7968373152366,28.578005017827,28.3652281553132,14.2623402477708,17.4204939771017,14.5133780931478,18.7410597262386,15.9413314322271,15.5329718669159,12.9223230967789,16.7015153165411,15.382806663646,12.5670018901864,12.2539211163422,21.8498495166829,16.0392296285344,16.3820355373875,23.6186091062685,15.6721616823909,5.30980553359851,19.9080121647085,14.8138542912728,16.7858520982749,11.2214719294694,10.4527950300935,12.4045580720746,11.6330793432802,14.6163925137736,14.5376908650475,7.37930260024991,11.3449097573006,21.7881347682424,24.3082476942269,13.0652270620582,14.3605813471167,18.4433842987965,17.1234064897988,18.4294903074375,17.6589670486468,11.9682571112492,9.32061111800809,14.5548742716275,30.5039567941738,19.0528023501169,21.9539046738487,23.1582347366085,24.2928531622691,11.0762717919343,27.2575193955449,12.3027034174454,20.6386867963223,19.26023084645,17.5182665014363,22.0077706630851,19.2173665493479,15.9779724194224,13.8551937800421,13.5435974328335,14.3200592702267,20.8781755763549,18.7053909756701,14.5807210109432,15.6816222010852,17.6873676634404,14.0258920240214,14.7123151191098,12.3025292732494,12.9614973291793,13.6694648879124,25.3661822407886,22.7265149986848,23.9914811162792,21.3896307178452,16.2741377581941,16.5577002980963,24.9970918315456,26.8221032778537,22.6496183959535,29.4732627407727,23.618460513145,22.4367895646007,16.6234676537935,22.3909886619323,26.2440062415146,24.16860391511,22.4509930902829,25.9622170963133,20.2334652229171,26.3522434364665,24.69100535622,20.6693679530523,23.2924334968008,18.3764617533029,15.7783817945118,19.272082607293,34.40782277298,28.9775756848606,27.5330770837089,23.1827512838629,18.7682475451182,14.4689783171139,14.7914181564555,12.0377304968487,29.3670958160875,27.6195141904306,21.7700295106971,24.5750050751473,27.4033007908257,28.7049681008086,24.9758325085768,19.3638117386415,31.2668262199101,27.4412965228465,26.2581989387967,21.9463680370567,18.4392294214465,16.531256760644,21.1709294254262,18.9358813703515,19.3354653187405,16.2767695218726,12.194929964489,15.1618327058278,15.2087579934144,15.4673599936582,20.6011316433741,15.3020114247638,17.230640686684,13.8125170472091,16.803227262004,17.5547390621972,16.8955219329356,16.6334779751869,17.1434626192708,18.1025322282524,23.8436189947321,19.040380578835,19.1983136047274,17.8536822651437,19.2074371516411,18.1518100892112,20.7780294184169,11.7839877048125,18.5070628273712,18.5188426866059,21.6892452879935,16.2683683245264,16.0112487114347,12.2407183189594,14.9716229405061,13.5368764050428,12.242453252406,16.3237650148441,13.216466630364
|short_description=p1@Rpap3
}}

Revision as of 11:44, 13 September 2013

Short description:p1@Rpap3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rpap3_5end
Coexpression cluster:MCL_coexpression_mm9:52
Association with transcript: 0bp_to_ENSMUST00000023104, NM_028003, uc007xkv.1_5end
EntrezGene:Rpap3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rpap3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.24
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E916.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E625.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F129.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.13
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.85
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A116.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.88
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A417.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I915.93
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I25.82
Ileum epithelium, pool1.CNhs13199.10252-104B97.79
Ileum epithelium, pool2.CNhs13232.10253-104C17.31
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.86
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.64
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.52
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D827.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D927.37
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B326.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.57
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I916.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C314.77
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C715.85
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.58
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.69
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.01
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.40
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.41
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.51
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.92
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E117.89
Mouse Schwann, donor1.CNhs12507.11728-123D912.12
Mouse Schwann, donor2.CNhs12573.11746-123F914.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.94
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F616.13
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I722.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E323.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I818.73
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.84
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I863.70
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B699.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.94
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.66
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.22
accessory axillary lymph node, adult.CNhs10475.1063-29H916.57
adrenal gland, adult.CNhs10508.49-24D717.96
adrenal gland, embryo E14.CNhs11038.406-44C516.83
adrenal gland, embryo E16.CNhs11004.1254-43D613.70
adrenal gland, embryo E17.CNhs11043.1263-45I111.30
adrenal gland, embryo E18.CNhs11026.1262-18F515.98
adrenal gland, neonate N00.CNhs11191.1311-23C119.64
adrenal gland, neonate N25.CNhs11223.1377-27I318.85
amnion, adult pregnant day17.5.CNhs10488.583-22A87.17
aorta, adult.CNhs10498.46-23H114.75
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F516.99
bone (os femoris), neonate N16.CNhs11225.1525-43A613.03
bone (os femoris), neonate N20.CNhs11195.1350-25C317.94
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B219.91
cerebellum, neonate N30.CNhs11135.1395-42I220.53
colon, adult.CNhs10468.36-18H78.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.97
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D117.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D417.15
corpora quadrigemina, adult.CNhs10501.16-22A427.56
corpus striatum, adult.CNhs10487.19-21D826.54
corpus striatum, neonate N00.CNhs11226.630-43F133.55
cortex, adult.CNhs10473.12-14D523.29
cortex, neonate N30.CNhs11107.1392-42F226.08
diencephalon, adult.CNhs10482.20-12F220.16
diencephalon, neonate N30.CNhs11201.1388-42B221.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.93
epididymis, adult.CNhs10490.58-23B220.72
eyeball, adult.CNhs10484.31-12G419.36
eyeball, embryo E12.CNhs11016.345-16C621.73
eyeball, embryo E14.CNhs10521.399-16E213.56
eyeball, embryo E15.CNhs10593.426-16C917.47
eyeball, embryo E17.CNhs11023.1261-18D421.10
eyeball, neonate N00.CNhs11207.633-15C622.11
eyeball, neonate N01.CNhs11140.1532-43E723.57
eyeball, neonate N02.CNhs11205.1551-44G821.36
eyeball, neonate N16.CNhs11188.777-19A225.61
forelimb, embryo E11.CNhs10596.335-25E221.34
forelimb, embryo E12.CNhs10600.359-14H215.51
forelimb, embryo E13.CNhs10589.384-1E219.53
forelimb, embryo E14.CNhs10577.413-26A813.15
forelimb, embryo E15.CNhs11007.437-20E720.02
forelimb, embryo E17.CNhs10598.1517-43C416.02
forelimb, embryo E18.CNhs11008.1520-43B513.99
gonad, embryo E13.CNhs11044.1564-45I623.49
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D224.71
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.32
heart, embryo E11.CNhs10586.331-24E916.36
heart, embryo E12.CNhs11015.353-12F520.87
heart, embryo E13.CNhs11013.376-3I920.35
heart, embryo E14.CNhs10597.403-26D417.05
heart, embryo E15.CNhs11017.431-16C818.30
heart, embryo E16.CNhs11021.457-17C616.04
heart, embryo E17.CNhs11025.479-18E522.09
heart, embryo E18.CNhs11030.1283-20G317.71
heart, neonate N00.CNhs11213.639-21E320.43
heart, neonate N03.CNhs11221.1349-25I224.85
heart, neonate N10.CNhs11118.749-24G116.25
heart, neonate N16.CNhs11209.782-15G120.51
heart, neonate N20.CNhs11127.821-26I620.47
heart, neonate N25.CNhs11196.1351-25D323.05
heart, neonate N30.CNhs11202.1390-42D219.06
hippocampus, adult.CNhs10478.13-16E818.72
hippocampus, neonate N00.CNhs11228.627-43G130.97
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A38.46
intestine, embryo E12.CNhs11019.1251-16I522.61
intestine, embryo E13.CNhs11010.381-16D522.99
intestine, embryo E15.CNhs10602.976-16D818.04
intestine, embryo E16.CNhs10585.463-22H414.12
intestine, embryo E17.CNhs10582.482-18D310.67
intestine, embryo E18.CNhs10526.1289-20F710.84
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E99.88
intestine, neonate N06.CNhs11102.688-20B810.05
intestine, neonate N07.CNhs11095.720-20F214.32
intestine, neonate N10.CNhs11098.755-23A511.50
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E39.94
intestine, neonate N30.CNhs11131.1384-42G18.56
kidney, embryo E14.CNhs10606.411-4I915.17
kidney, embryo E15.CNhs10997.434-16F823.54
kidney, embryo E16.CNhs10584.464-22A523.67
kidney, embryo E17.CNhs11028.483-18I226.27
kidney, embryo E18.CNhs11001.1288-20C720.75
kidney, neonate N00.CNhs11214.646-21G724.20
kidney, neonate N10.CNhs11206.758-6D520.05
kidney, neonate N20.CNhs11113.832-19I120.37
kidney, neonate N25.CNhs11122.1353-25F321.19
kidney, neonate N30.CNhs11203.1385-42H117.77
liver, adult pregnant day01.CNhs10466.508-5B28.89
liver, embryo E12.CNhs10601.355-15F815.85
liver, embryo E13.CNhs10524.378-3H617.69
liver, embryo E14.CNhs10594.409-16E113.04
liver, embryo E15.CNhs10520.433-16D716.63
liver, embryo E16.CNhs10523.462-17F514.47
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G414.10
liver, neonate N00.CNhs11117.641-24F414.27
liver, neonate N03.CNhs11123.1345-25G26.59
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B911.23
liver, neonate N20.CNhs11220.823-25A313.64
liver, neonate N25.CNhs11198.1368-26H116.68
liver, neonate N30.CNhs11106.1382-42D19.17
lung, adult.CNhs10474.28-22B114.04
lung, embryo E12.CNhs10522.354-16G219.33
lung, embryo E14.CNhs10604.404-26F818.58
lung, embryo E15.CNhs11020.432-17C523.09
lung, embryo E16.CNhs10998.458-17B623.70
lung, embryo E17.CNhs10605.480-44A617.09
lung, embryo E18.CNhs10583.1287-20I613.57
lung, neonate N00.CNhs11224.640-42C613.07
lung, neonate N06.CNhs11212.683-20E520.18
lung, neonate N07.CNhs11111.715-19A321.93
lung, neonate N10.CNhs11219.750-23E620.09
lung, neonate N20.CNhs11109.822-18A418.02
lung, neonate N25.CNhs11119.1359-25C719.34
lung, neonate N30.CNhs11133.1394-42H213.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B69.34
mammary gland, adult pregnant day19.CNhs10476.588-5H213.80
medulla oblongata, adult.CNhs10477.17-12C228.58
medulla oblongata, neonate N30.CNhs11200.1396-42A328.37
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C217.42
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.74
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.53
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.57
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I921.85
ovary, adult.CNhs10507.91-2I716.04
ovary, embryo E18.CNhs11040.505-44H716.38
ovary, neonate N00.CNhs11217.1299-22I423.62
oviduct, adult pregnant day01.CNhs10500.988-6G615.67
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F419.91
pancreas, embryo E15.CNhs11042.1556-45F214.81
pancreas, embryo E16.CNhs11003.460-26E516.79
pancreas, embryo E17.CNhs10599.1558-45G311.22
pancreas, embryo E18.CNhs10580.1535-43I710.45
pancreas, neonate N00.CNhs11105.645-26G912.40
pancreas, neonate N01.CNhs11138.1531-43D711.63
pancreas, neonate N02.CNhs11139.1539-43D814.62
pancreas, neonate N16.CNhs11136.787-43B614.54
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G821.79
pituitary gland, embryo E12.CNhs11018.346-16E624.31
pituitary gland, embryo E13.CNhs11009.370-44C713.07
pituitary gland, embryo E14.CNhs11037.398-44A514.36
pituitary gland, embryo E15.CNhs10592.427-16B918.44
pituitary gland, embryo E16.CNhs11036.449-43F617.12
pituitary gland, embryo E17.CNhs11039.1265-44F518.43
pituitary gland, neonate N00.CNhs11190.1308-22E917.66
placenta, adult pregnant day10.CNhs10472.539-13I711.97
placenta, adult pregnant day17.CNhs10464.577-18G39.32
prostate, adult.CNhs10470.859-1F814.55
skin, adult.CNhs10492.30-1C330.50
skin, neonate N00.CNhs11124.650-25G419.05
skin, neonate N03.CNhs11215.662-22H321.95
skin, neonate N06.CNhs11097.693-20I523.16
skin, neonate N10.CNhs11108.762-6C424.29
small intestine, neonate N16.CNhs11114.790-21I111.08
spinal cord, adult.CNhs10505.24-13C927.26
spleen, adult.CNhs10465.25-2G212.30
spleen, embryo E16.CNhs11035.461-43C120.64
spleen, embryo E18.CNhs11011.1271-21F219.26
spleen, neonate N10.CNhs11116.752-24D117.52
spleen, neonate N20.CNhs11112.824-19H122.01
spleen, neonate N25.CNhs11099.1354-25G319.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.54
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E320.88
stomach, embryo E15.CNhs10603.1252-16G818.71
stomach, embryo E16.CNhs11022.459-17D414.58
stomach, embryo E17.CNhs11006.1035-18D515.68
stomach, embryo E18.CNhs10999.1286-20C617.69
stomach, neonate N03.CNhs11193.1340-24B814.03
stomach, neonate N07.CNhs11210.718-18A914.71
stomach, neonate N25.CNhs11104.1355-25E412.30
stomach, neonate N30.CNhs11134.1386-42I112.96
submandibular gland, adult.CNhs10469.59-29C113.67
testis, adult.CNhs10504.57-7G525.37
testis, embryo E13.CNhs11031.389-23F522.73
testis, embryo E15.CNhs11034.443-27C523.99
testis, embryo E16.CNhs11033.470-26G521.39
testis, embryo E17.CNhs11029.486-18I516.27
testis, embryo E18.CNhs11027.503-18G516.56
testis, neonate N00.CNhs11189.1300-22B725.00
testis, neonate N07.CNhs11222.726-26I426.82
testis, neonate N10.CNhs11204.763-44D922.65
testis, neonate N20.CNhs11110.839-18H329.47
testis, neonate N30.CNhs11130.1391-42E223.62
thymus, adult.CNhs10471.38-12B522.44
thymus, embryo E14.CNhs11041.402-44I416.62
thymus, embryo E15.CNhs11005.430-45I222.39
thymus, embryo E16.CNhs11002.456-26C526.24
thymus, embryo E17.CNhs10581.478-18C124.17
thymus, embryo E18.CNhs10595.1273-19G422.45
thymus, neonate N02.CNhs11181.1541-43F825.96
thymus, neonate N03.CNhs11137.2104-43C720.23
thymus, neonate N06.CNhs11197.681-26C426.35
thymus, neonate N07.CNhs11211.713-19D324.69
thymus, neonate N10.CNhs11194.748-24E420.67
thymus, neonate N20.CNhs11186.820-7A223.29
thymus, neonate N25.CNhs11125.1362-25G718.38
thymus, neonate N30.CNhs11132.1393-42G215.78
tongue, adult.CNhs10499.32-1B419.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H334.41
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F728.98
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G527.53
urinary bladder, adult.CNhs10481.879-12E423.18
uterus, adult pregnant day19.CNhs10497.590-15F518.77
uterus, adult.CNhs10509.92-27E514.47
vagina, adult.CNhs10502.89-27D514.79
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.37
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.77
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A427.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A528.70
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.44
whole body, embryo E11.CNhs11014.324-5I826.26
whole body, embryo E12.CNhs10587.857-27C921.95
whole body, embryo E13.CNhs10512.372-23H218.44
whole body, embryo E14.5.CNhs10578.420-27D216.53
whole body, embryo E14.CNhs10519.395-14B121.17
whole body, embryo E16.CNhs10514.453-14F218.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.21
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.55
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.90
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.63
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G523.84
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.04
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.78
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.27
whole body, embryo E17.5.CNhs10513.490-9F916.01
whole body, embryo E17.CNhs10517.475-3I512.24
whole body, embryo E18.CNhs10516.493-3B314.97
whole body, neonate N00.CNhs10525.657-19C213.54
whole body, neonate N01.CNhs10576.659-23C612.24
whole body, neonate N06.CNhs10515.692-21D116.32
whole body, neonate N10.CNhs10518.761-6B413.22





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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