FFCP PHASE1:Mm9::chr15:88731061..88731064,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=370|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:88731061..88731064,-|id=chr15:88731061..88731064,-|ontology_enrichment_celltype=CL:0000548!2.43e-32!115;CL:0000004!2.43e-32!115;CL:0000255!2.43e-32!115;CL:0002371!4.89e-31!118;CL:0000144!8.47e-30!121;CL:0000012!8.47e-30!121;CL:0000723!8.06e-29!91;CL:0000048!8.06e-29!91;CL:0000034!3.31e-28!97;CL:0002321!2.04e-22!70;CL:0000220!2.04e-22!70;CL:0000055!1.26e-21!50;CL:0002319!5.50e-20!43;CL:0000221!2.65e-19!44;CL:0000133!2.65e-19!44;CL:0000393!6.64e-18!39;CL:0000211!6.64e-18!39;CL:0000540!1.45e-17!33;CL:0000047!1.45e-17!33;CL:0000031!1.45e-17!33;CL:0000404!1.45e-17!33;CL:0000219!3.45e-13!54;CL:0002320!7.41e-12!46;CL:0000134!7.41e-12!46;CL:0000107!3.10e-11!9;CL:0002031!4.85e-11!25;CL:0000063!1.75e-10!66;CL:0000117!1.57e-09!23;CL:0000337!1.57e-09!23;CL:0000988!2.23e-08!32;CL:0002032!2.23e-08!32;CL:0000037!2.23e-08!32;CL:0000566!2.23e-08!32;CL:0000837!2.23e-08!32;CL:0000839!9.66e-08!13;CL:0000414!1.82e-07!11|ontology_enrichment_celltype_v019_2=CL:0000107,7.16e-15,9;CL:0000723,6.72e-10,91;CL:0000048,6.72e-10,91;CL:0000034,5.17e-09,97;CL:0002319,5.26e-09,43;CL:0000221,9.67e-09,44;CL:0000133,9.67e-09,44;CL:0000540,1.29e-08,33;CL:0000047,1.29e-08,33;CL:0000031,1.29e-08,33;CL:0000404,1.29e-08,33;CL:0002321,1.54e-08,70;CL:0000393,2.13e-08,39;CL:0000211,2.13e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.05e-18!73;UBERON:0005743!2.05e-18!73;UBERON:0000073!1.39e-17!75;UBERON:0001016!1.39e-17!75;UBERON:0002020!3.92e-13!34;UBERON:0002791!4.72e-12!29;UBERON:0003528!4.72e-12!29;UBERON:0001893!4.72e-12!29;UBERON:0002384!7.41e-12!46;UBERON:0002021!1.11e-11!10;UBERON:0000411!1.11e-11!10;UBERON:0001950!1.11e-11!10;UBERON:0002410!3.10e-11!9;UBERON:0002619!2.92e-10!17;UBERON:0000956!3.69e-10!21;UBERON:0001869!3.69e-10!21;UBERON:0000203!3.69e-10!21;UBERON:0004121!1.04e-09!102;UBERON:0000924!1.04e-09!102;UBERON:0006601!1.04e-09!102;UBERON:0000010!9.69e-09!11;UBERON:0002616!4.71e-08!49;UBERON:0001049!5.59e-08!52;UBERON:0005068!5.59e-08!52;UBERON:0006241!5.59e-08!52;UBERON:0007135!5.59e-08!52;UBERON:0000955!9.24e-08!50;UBERON:0006238!9.24e-08!50;UBERON:0002780!1.73e-07!39;UBERON:0001890!1.73e-07!39;UBERON:0006240!1.73e-07!39;UBERON:0003080!3.63e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002410,7.16e-15,9;UBERON:0002021,1.90e-13,10;UBERON:0000411,1.90e-13,10;UBERON:0001950,1.90e-13,10;UBERON:0000010,5.31e-12,11;UBERON:0001017,6.09e-12,73;UBERON:0001016,1.65e-11,75;UBERON:0002619,5.74e-10,17;UBERON:0000011,1.39e-09,3;UBERON:0004121,3.38e-08,95;UBERON:0000924,3.38e-08,95;UBERON:0006601,3.38e-08,95;UBERON:0000956,7.89e-08,21;UBERON:0001869,7.89e-08,21;UBERON:0000203,7.89e-08,21;UBERON:0002020,9.77e-07,34|phase1_expression=0,0,0.454999239389536,0,1.50268718983904,0,0.467225281191051,0.258246646883153,0.281577444303333,0.234064526321993,0.34243593645101,0.0797721589953364,0.342401459862411,0.34968160967599,1.33243904726265,0,2.09868563438444,0.157731082679119,0.411343300817216,2.12194825899015,0,0,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,13.9706748161119,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.218025156380447,0.439372365468944,0,0,4.31257693094915,0.167782606057736,0,0,0.257259436035947,0.573066879877513,2.06268836910977,0.809265843438391,0,8.23980824558033,0,3.55717918444456,0.449949858640699,0.988866362566974,0,0.898800331555214,0.384218305321555,0,0.405017814995072,0.420649922702764,1.14260393761521,0.662605622854841,0.857435594504678,0,7.35375029288017,0,0.893811366596314,0.768032666281217,0.923204014111357,0.182975287204819,0,0.558365998002762,0.56276261003168,1.5279824777681,0,0.284743361598206,0,0,0,0.289864488701678,2.58127163094416,0,0.539703191637817,2.59910566979068,1.79210754838934,0,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17562273527484,0,0,0,0,0,0,0.94652465824877,1.95219372148319,2.80050417052639,2.15071918157297,2.45078541490634,2.26461224631066,0.809621403349789,1.16902343164525,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0.564751842617067,1.38097570952153,1.71868654031819,0.343706364687375,2.74033007908257,6.0431511791176,4.05013500139084,1.80128481289688,0.453142408984205,1.03552062350364,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr15:88731061..88731064,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=370 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:88731061..88731064,- | |||
|id=chr15:88731061..88731064,- | |||
|ontology_enrichment_celltype=CL:0000548!2.43e-32!115;CL:0000004!2.43e-32!115;CL:0000255!2.43e-32!115;CL:0002371!4.89e-31!118;CL:0000144!8.47e-30!121;CL:0000012!8.47e-30!121;CL:0000723!8.06e-29!91;CL:0000048!8.06e-29!91;CL:0000034!3.31e-28!97;CL:0002321!2.04e-22!70;CL:0000220!2.04e-22!70;CL:0000055!1.26e-21!50;CL:0002319!5.50e-20!43;CL:0000221!2.65e-19!44;CL:0000133!2.65e-19!44;CL:0000393!6.64e-18!39;CL:0000211!6.64e-18!39;CL:0000540!1.45e-17!33;CL:0000047!1.45e-17!33;CL:0000031!1.45e-17!33;CL:0000404!1.45e-17!33;CL:0000219!3.45e-13!54;CL:0002320!7.41e-12!46;CL:0000134!7.41e-12!46;CL:0000107!3.10e-11!9;CL:0002031!4.85e-11!25;CL:0000063!1.75e-10!66;CL:0000117!1.57e-09!23;CL:0000337!1.57e-09!23;CL:0000988!2.23e-08!32;CL:0002032!2.23e-08!32;CL:0000037!2.23e-08!32;CL:0000566!2.23e-08!32;CL:0000837!2.23e-08!32;CL:0000839!9.66e-08!13;CL:0000414!1.82e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,7.16e-15,9;CL:0000723,6.72e-10,91;CL:0000048,6.72e-10,91;CL:0000034,5.17e-09,97;CL:0002319,5.26e-09,43;CL:0000221,9.67e-09,44;CL:0000133,9.67e-09,44;CL:0000540,1.29e-08,33;CL:0000047,1.29e-08,33;CL:0000031,1.29e-08,33;CL:0000404,1.29e-08,33;CL:0002321,1.54e-08,70;CL:0000393,2.13e-08,39;CL:0000211,2.13e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.05e-18!73;UBERON:0005743!2.05e-18!73;UBERON:0000073!1.39e-17!75;UBERON:0001016!1.39e-17!75;UBERON:0002020!3.92e-13!34;UBERON:0002791!4.72e-12!29;UBERON:0003528!4.72e-12!29;UBERON:0001893!4.72e-12!29;UBERON:0002384!7.41e-12!46;UBERON:0002021!1.11e-11!10;UBERON:0000411!1.11e-11!10;UBERON:0001950!1.11e-11!10;UBERON:0002410!3.10e-11!9;UBERON:0002619!2.92e-10!17;UBERON:0000956!3.69e-10!21;UBERON:0001869!3.69e-10!21;UBERON:0000203!3.69e-10!21;UBERON:0004121!1.04e-09!102;UBERON:0000924!1.04e-09!102;UBERON:0006601!1.04e-09!102;UBERON:0000010!9.69e-09!11;UBERON:0002616!4.71e-08!49;UBERON:0001049!5.59e-08!52;UBERON:0005068!5.59e-08!52;UBERON:0006241!5.59e-08!52;UBERON:0007135!5.59e-08!52;UBERON:0000955!9.24e-08!50;UBERON:0006238!9.24e-08!50;UBERON:0002780!1.73e-07!39;UBERON:0001890!1.73e-07!39;UBERON:0006240!1.73e-07!39;UBERON:0003080!3.63e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,7.16e-15,9;UBERON:0002021,1.90e-13,10;UBERON:0000411,1.90e-13,10;UBERON:0001950,1.90e-13,10;UBERON:0000010,5.31e-12,11;UBERON:0001017,6.09e-12,73;UBERON:0001016,1.65e-11,75;UBERON:0002619,5.74e-10,17;UBERON:0000011,1.39e-09,3;UBERON:0004121,3.38e-08,95;UBERON:0000924,3.38e-08,95;UBERON:0006601,3.38e-08,95;UBERON:0000956,7.89e-08,21;UBERON:0001869,7.89e-08,21;UBERON:0000203,7.89e-08,21;UBERON:0002020,9.77e-07,34 | |||
|phase1_expression=0,0,0.454999239389536,0,1.50268718983904,0,0.467225281191051,0.258246646883153,0.281577444303333,0.234064526321993,0.34243593645101,0.0797721589953364,0.342401459862411,0.34968160967599,1.33243904726265,0,2.09868563438444,0.157731082679119,0.411343300817216,2.12194825899015,0,0,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,13.9706748161119,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.218025156380447,0.439372365468944,0,0,4.31257693094915,0.167782606057736,0,0,0.257259436035947,0.573066879877513,2.06268836910977,0.809265843438391,0,8.23980824558033,0,3.55717918444456,0.449949858640699,0.988866362566974,0,0.898800331555214,0.384218305321555,0,0.405017814995072,0.420649922702764,1.14260393761521,0.662605622854841,0.857435594504678,0,7.35375029288017,0,0.893811366596314,0.768032666281217,0.923204014111357,0.182975287204819,0,0.558365998002762,0.56276261003168,1.5279824777681,0,0.284743361598206,0,0,0,0.289864488701678,2.58127163094416,0,0.539703191637817,2.59910566979068,1.79210754838934,0,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17562273527484,0,0,0,0,0,0,0.94652465824877,1.95219372148319,2.80050417052639,2.15071918157297,2.45078541490634,2.26461224631066,0.809621403349789,1.16902343164525,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0.564751842617067,1.38097570952153,1.71868654031819,0.343706364687375,2.74033007908257,6.0431511791176,4.05013500139084,1.80128481289688,0.453142408984205,1.03552062350364,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr15:88731061..88731064,- | |||
}} |
Revision as of 11:31, 13 September 2013
Short description: | p@chr15:88731061..88731064, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:88731061..88731064, - |
Coexpression cluster: | MCL_coexpression_mm9:370 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 7.16e-15 | 9 |
somatic stem cell | 6.72e-10 | 91 |
multi fate stem cell | 6.72e-10 | 91 |
stem cell | 5.17e-09 | 97 |
neural cell | 5.26e-09 | 43 |
ectodermal cell | 9.67e-09 | 44 |
neurectodermal cell | 9.67e-09 | 44 |
neuron | 1.29e-08 | 33 |
neuronal stem cell | 1.29e-08 | 33 |
neuroblast | 1.29e-08 | 33 |
electrically signaling cell | 1.29e-08 | 33 |
embryonic cell | 1.54e-08 | 70 |
electrically responsive cell | 2.13e-08 | 39 |
electrically active cell | 2.13e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 7.16e-15 | 9 |
occipital lobe | 1.90e-13 | 10 |
visual cortex | 1.90e-13 | 10 |
neocortex | 1.90e-13 | 10 |
peripheral nervous system | 5.31e-12 | 11 |
central nervous system | 6.09e-12 | 73 |
nervous system | 1.65e-11 | 75 |
regional part of cerebral cortex | 5.74e-10 | 17 |
parasympathetic nervous system | 1.39e-09 | 3 |
ectoderm-derived structure | 3.38e-08 | 95 |
ectoderm | 3.38e-08 | 95 |
presumptive ectoderm | 3.38e-08 | 95 |
cerebral cortex | 7.89e-08 | 21 |
cerebral hemisphere | 7.89e-08 | 21 |
pallium | 7.89e-08 | 21 |
gray matter | 9.77e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.