FFCP PHASE1:Mm9::chr15:83295244..83295247,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=386|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:83295244..83295247,+|id=chr15:83295244..83295247,+|ontology_enrichment_celltype=CL:0002563!1.27e-11!9;CL:0002251!1.27e-11!9;CL:0000075!7.75e-09!7;CL:0000063!1.22e-08!66;CL:0000239!2.17e-08!6;CL:0000677!2.17e-08!6;CL:0000212!2.17e-08!6;CL:0000584!2.17e-08!6;CL:0000066!3.04e-07!25|ontology_enrichment_celltype_v019_2=CL:0002563,7.46e-25,9;CL:0002251,7.46e-25,9;CL:0000239,1.09e-19,6;CL:0000677,1.09e-19,6;CL:0000584,1.09e-19,6;CL:0000066,2.77e-17,25;CL:0000075,7.25e-17,7;CL:0002076,1.19e-14,15;CL:0000223,3.82e-14,20;CL:0002250,5.15e-07,3;CL:0000682,5.92e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.39e-15,3;DOID:4045,2.39e-15,3;DOID:0050686,3.57e-13,6|ontology_enrichment_uberon=UBERON:0001242!7.92e-13!13;UBERON:0000060!7.92e-13!13;UBERON:0001262!7.92e-13!13;UBERON:0004786!7.92e-13!13;UBERON:0003350!1.27e-11!9;UBERON:0004808!1.27e-11!9;UBERON:0001277!1.27e-11!9;UBERON:0000485!1.07e-10!11;UBERON:0000344!1.35e-10!15|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.46e-25,9;UBERON:0004808,7.46e-25,9;UBERON:0001277,7.46e-25,9;UBERON:0000485,3.20e-20,11;UBERON:0001242,5.22e-17,13;UBERON:0001262,5.22e-17,13;UBERON:0004786,5.22e-17,13;UBERON:0000344,1.19e-14,15;UBERON:0004923,6.92e-09,24;UBERON:0000490,4.51e-07,66|phase1_expression=0,2.79180326111489,4.09499315450582,12.40103266358,12.5223932486587,1.17515490338323,0.467225281191051,0,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,4.59385571292016,0.430761996159075,1.07735616342945,0,0.504060259519861,0.221730510655305,3.81018404075779,0.61506478758457,0,2.3108129580102,0.498703936075477,2.85837098767317,4.60384793810598,7.0320181007142,10.470474879476,14.1175557127443,4.78131839470912,1.45653105909346,0,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0,0,0.335565212115473,0,0,0,0.573066879877513,0,0,0,0,0,0,0.449949858640699,0,0,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50742528533188,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0.852490498186778,0,0,0,0,0.393528463494808,0,0,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0.268412837520744,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0.54390568381871,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0.314578033277133,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p@chr15:83295244..83295247,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=386 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:83295244..83295247,+ | |||
|id=chr15:83295244..83295247,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.27e-11!9;CL:0002251!1.27e-11!9;CL:0000075!7.75e-09!7;CL:0000063!1.22e-08!66;CL:0000239!2.17e-08!6;CL:0000677!2.17e-08!6;CL:0000212!2.17e-08!6;CL:0000584!2.17e-08!6;CL:0000066!3.04e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.46e-25,9;CL:0002251,7.46e-25,9;CL:0000239,1.09e-19,6;CL:0000677,1.09e-19,6;CL:0000584,1.09e-19,6;CL:0000066,2.77e-17,25;CL:0000075,7.25e-17,7;CL:0002076,1.19e-14,15;CL:0000223,3.82e-14,20;CL:0002250,5.15e-07,3;CL:0000682,5.92e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.39e-15,3;DOID:4045,2.39e-15,3;DOID:0050686,3.57e-13,6 | |||
|ontology_enrichment_uberon=UBERON:0001242!7.92e-13!13;UBERON:0000060!7.92e-13!13;UBERON:0001262!7.92e-13!13;UBERON:0004786!7.92e-13!13;UBERON:0003350!1.27e-11!9;UBERON:0004808!1.27e-11!9;UBERON:0001277!1.27e-11!9;UBERON:0000485!1.07e-10!11;UBERON:0000344!1.35e-10!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.46e-25,9;UBERON:0004808,7.46e-25,9;UBERON:0001277,7.46e-25,9;UBERON:0000485,3.20e-20,11;UBERON:0001242,5.22e-17,13;UBERON:0001262,5.22e-17,13;UBERON:0004786,5.22e-17,13;UBERON:0000344,1.19e-14,15;UBERON:0004923,6.92e-09,24;UBERON:0000490,4.51e-07,66 | |||
|phase1_expression=0,2.79180326111489,4.09499315450582,12.40103266358,12.5223932486587,1.17515490338323,0.467225281191051,0,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,4.59385571292016,0.430761996159075,1.07735616342945,0,0.504060259519861,0.221730510655305,3.81018404075779,0.61506478758457,0,2.3108129580102,0.498703936075477,2.85837098767317,4.60384793810598,7.0320181007142,10.470474879476,14.1175557127443,4.78131839470912,1.45653105909346,0,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0,0,0.335565212115473,0,0,0,0.573066879877513,0,0,0,0,0,0,0.449949858640699,0,0,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50742528533188,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0.852490498186778,0,0,0,0,0.393528463494808,0,0,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0.268412837520744,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0.54390568381871,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0.314578033277133,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr15:83295244..83295247,+ | |||
}} |
Revision as of 11:24, 13 September 2013
Short description: | p@chr15:83295244..83295247, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:83295244..83295247, + |
Coexpression cluster: | MCL_coexpression_mm9:386 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.46e-25 | 9 |
epithelial cell of alimentary canal | 7.46e-25 | 9 |
brush border epithelial cell | 1.09e-19 | 6 |
gut absorptive cell | 1.09e-19 | 6 |
enterocyte | 1.09e-19 | 6 |
epithelial cell | 2.77e-17 | 25 |
columnar/cuboidal epithelial cell | 7.25e-17 | 7 |
endo-epithelial cell | 1.19e-14 | 15 |
endodermal cell | 3.82e-14 | 20 |
intestinal crypt stem cell | 5.15e-07 | 3 |
M cell of gut | 5.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 7.46e-25 | 9 |
gastrointestinal system epithelium | 7.46e-25 | 9 |
intestinal epithelium | 7.46e-25 | 9 |
simple columnar epithelium | 3.20e-20 | 11 |
intestinal mucosa | 5.22e-17 | 13 |
wall of intestine | 5.22e-17 | 13 |
gastrointestinal system mucosa | 5.22e-17 | 13 |
mucosa | 1.19e-14 | 15 |
organ component layer | 6.92e-09 | 24 |
unilaminar epithelium | 4.51e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.39e-15 | 3 |
muscle cancer | 2.39e-15 | 3 |
organ system cancer | 3.57e-13 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.