FFCP PHASE1:Mm9::chr15:79272439..79272495,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=27373|HGNC=|MCL_coexpression_id=22|UniProt=A8Y308,Q9JMK2,A2ABP1|association_with_transcript=0bp_to_NM_013767,uc007wtl.2,uc011zwb.1_5end|description=CAGE_peak_2_at_Csnk1e_5end|id=chr15:79272439..79272495,-|ontology_enrichment_celltype=CL:0000540!6.14e-12!33;CL:0000047!6.14e-12!33;CL:0000031!6.14e-12!33;CL:0000404!6.14e-12!33;CL:0000117!1.60e-11!23;CL:0000337!1.60e-11!23;CL:0000393!3.75e-10!39;CL:0000211!3.75e-10!39;CL:0002319!2.40e-09!43;CL:0000221!5.42e-09!44;CL:0000133!5.42e-09!44;CL:0000055!1.61e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,6.10e-12,33;CL:0000047,6.10e-12,33;CL:0000031,6.10e-12,33;CL:0000404,6.10e-12,33;CL:0000117,1.59e-11,23;CL:0000337,1.59e-11,23;CL:0000393,3.74e-10,39;CL:0000211,3.74e-10,39;CL:0002319,2.23e-09,43;CL:0000221,5.05e-09,44;CL:0000133,5.05e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.24e-18!75;UBERON:0001016!3.24e-18!75;UBERON:0004121!6.33e-18!102;UBERON:0000924!6.33e-18!102;UBERON:0006601!6.33e-18!102;UBERON:0001017!2.08e-17!73;UBERON:0005743!2.08e-17!73;UBERON:0000033!1.77e-14!63;UBERON:0002346!2.42e-14!71;UBERON:0003075!2.42e-14!71;UBERON:0007284!2.42e-14!71;UBERON:0000955!4.57e-14!50;UBERON:0006238!4.57e-14!50;UBERON:0002020!5.63e-14!34;UBERON:0003056!6.99e-14!49;UBERON:0001049!9.37e-14!52;UBERON:0005068!9.37e-14!52;UBERON:0006241!9.37e-14!52;UBERON:0007135!9.37e-14!52;UBERON:0002616!1.69e-13!49;UBERON:0002791!3.03e-12!29;UBERON:0003528!3.03e-12!29;UBERON:0001893!3.03e-12!29;UBERON:0003080!3.95e-12!40;UBERON:0002780!1.23e-11!39;UBERON:0001890!1.23e-11!39;UBERON:0006240!1.23e-11!39;UBERON:0000153!4.51e-10!94;UBERON:0007811!1.25e-09!86;UBERON:0000956!2.16e-09!21;UBERON:0001869!2.16e-09!21;UBERON:0000203!2.16e-09!21;UBERON:0002619!5.18e-07!17;UBERON:0000025!9.78e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.91e-19,95;UBERON:0000924,1.91e-19,95;UBERON:0006601,1.91e-19,95;UBERON:0001016,2.96e-18,75;UBERON:0001017,1.90e-17,73;UBERON:0002346,3.68e-16,64;UBERON:0003075,3.68e-16,64;UBERON:0007284,3.68e-16,64;UBERON:0010371,6.67e-16,73;UBERON:0010314,2.30e-15,92;UBERON:0000073,2.53e-15,54;UBERON:0002020,5.59e-14,34;UBERON:0003056,6.95e-14,49;UBERON:0001049,9.30e-14,52;UBERON:0005068,9.30e-14,52;UBERON:0006241,9.30e-14,52;UBERON:0007135,9.30e-14,52;UBERON:0000955,6.27e-13,47;UBERON:0006238,6.27e-13,47;UBERON:0002616,2.26e-12,46;UBERON:0003528,3.01e-12,29;UBERON:0002791,3.01e-12,29;UBERON:0001893,3.01e-12,29;UBERON:0003080,3.92e-12,40;UBERON:0002780,1.22e-11,39;UBERON:0001890,1.22e-11,39;UBERON:0006240,1.22e-11,39;UBERON:0000956,2.15e-09,21;UBERON:0001869,2.15e-09,21;UBERON:0000203,2.15e-09,21;UBERON:0002619,5.16e-07,17|phase1_expression=4.64431656603902,0,0,1.20985684522732,1.00179145989269,2.85394762250213,1.63528848416868,0.774739940649458,8.4473233291,5.38348410540585,4.79410311031414,4.78632953972018,1.36960583944965,1.48614684112296,0.333109761815663,1.01237633694913,0.699561878128147,2.20823515750766,2.33094537129756,1.69755860719212,5.52781385981954,2.38298282882125,1.30599894569468,0.47997726838022,1.14704640533585,0.57423196411502,2.15380998079537,0.861884930743556,0.570070258369122,1.26015064879965,0.665191531965914,2.54012269383853,3.69038872550742,0,1.73310971850765,2.65975432573588,1.42918549383658,8.78916424547506,5.4693474116666,4.18818995179039,9.99993529652724,12.294818729252,8.73918635456076,4.53228544712078,4.8660926985367,6.60768307782054,4.69434806608824,3.2703773457067,3.73466510648602,2.91644848611425,2.65974201088189,0,5.87239121202077,0.725362142011344,1.34437519656986,7.20326420900652,2.86533439938757,3.09403255366465,27.9196715986245,20.1016572123373,29.7900759647904,4.40497891689872,1.77858959222228,6.29929802096979,5.93319817540185,7.8152812644071,6.5912024314049,8.06858441175265,28.2035745479059,20.520902626417,20.1911962897327,6.85562362569129,8.1721360152097,20.9459266657571,30.4788597837992,17.4651569455904,7.70811166995721,10.853423737241,10.2916377281683,23.7395317914349,31.8376999736386,25.0038417867245,6.97957497503452,4.50210088025344,9.62628960993904,9.1334861496837,10.6778760599327,19.199142920006,10.4502146799794,8.23730005163962,3.47837386442013,0,12.2394840067395,1.07940638327563,0,0.448026887097336,2.94933282276679,3.91989741929533,2.85764605063156,6.00677276667578,3.94361575374705,1.28326477414318,5.09610479413291,0,4.11332977921307,4.30711771307668,7.58286667522175,2.96878087269556,1.55362730188303,5.04703272820404,4.51061849591953,4.26251669636998,4.61230994512117,3.91878865436819,5.64425794251383,4.90099706185734,2.96633961281249,4.916378135277,2.65383165584962,6.30890714794896,5.30019644304944,1.45462575940567,0,10.5401086924157,7.54008144528438,1.78819938646014,5.87094110079009,1.19980546198682,5.46401976414178,11.2342979553617,9.15001205637253,20.6073137465098,12.8629996942285,13.2972037811772,8.3115217823824,9.89671704713322,7.02691610567182,4.47865094196335,3.79084137650512,4.62972082950243,6.37590170517248,8.04657365517155,12.7844112161798,8.43946979880004,13.8794458268709,10.1209839025031,11.4316103962869,3.62184719034622,10.3472636607764,7.56424320671277,5.27853372491847,7.67185063496512,6.39508673218875,8.70630416305416,4.52720700097476,4.77682240364384,2.80885274925294,2.83082697826187,4.54661599032948,8.69928244649108,6.0976775595085,9.00310307305074,7.33908680314152,5.70616272067471,6.78775296704464,6.74348439776183,6.9751084363901,10.6256461554124,8.06343264576054,6.40253109908471,7.21512404958116,6.72519942156529,4.17145219052996,7.1129401942997,9.46304768538573,20.5809224758569,0.660837565967596,1.32225283331772,7.67837701926842,6.27039014023184,5.28356591420583,2.42020229548011,1.11189021922435,2.47293313946327,3.32170343081158,1.4822905925161,3.2673577144035,2.78539060857611,2.33956904542944,3.59527763461689,1.29682829924817,2.98711909881551,7.39704813717019,5.71242563048644,9.01661885384643,5.49858585182348,5.81857461502877,7.29412526859313,5.50157872981038,2.95220295959204,1.8839847340965,2.09775178667061,2.37162101669719,1.16791574001266,2.94838492669805,1.57403478669398,0.811440485554012,0.964708639009667,3.05551022137704,0.575392274901621,1.94562272130042,0.823684239564244,1.43768206527355,2.23284568601102,2.18426371180192,1.76805214562978,1.07638448113147,0.964887042726734,7.20537441649758,8.14813070613084,8.31121379854332,6.45031325945715,4.69380496577004,5.52770649557992,5.47500374037832,10.9274842800367,8.03939234941574,9.7444463445461,13.0752910299139,6.55453258862952,9.67035898449015,6.36455857758651,3.01582567878545,1.63171705145613,1.47529281905711,2.48343071674259,7.06422595946285,9.02529986759964,7.70494243270374,7.82659874333556,9.14973836307144,6.24701990874622,6.89354872744957,5.01834475700359,8.68914828921337,5.94460714656548,9.31064613852257,11.1057226006299,6.7198922250909,15.1021018718249,3.40656204499845,5.87616492101942,6.35259141478947,6.26886467295635,1.32745138339963,2.91336763385978,3.62788268357701,2.07465587731488,3.54362271456927,4.30409207121498,5.94385074286909,2.90826983582004,2.49548164869305,3.79244109522979,5.27093042874994,4.12542172992747,3.74483566329167,10.443543453816,8.40831444587904,5.78709994585299,5.85222771019503,4.10248280484762,7.24015690649332,2.74018454203139,6.33613611772018,7.62595455109753,1.98475558249466,5.93590510589328,11.7869031488011,10.0119455380739,9.78853220825719,9.52017218521355,2.33184669303881,4.26478194624172,2.05045056957423,4.12773735926445,2.59272338317596,1.88368457004691,1.36694227721025,1.37266903923914,9.34881364966204,9.23679585336143,10.6413979829406,1.90934123603023,8.54107182669065,4.47302827679067,3.24016022465404,4.59994251231831,2.18362563746178,2.83215127408124,3.30613822901344,2.87931536182433,1.94422459937689,1.86401793926078,0,4.9340460194513,3.47462829959905,5.44463327363333,4.00395452780966,3.37912250981556,4.92900402312167,5.208175393758,4.50895181030557,1.93267296660805,2.30424005006292,5.68820017130721,7.09538253515575,2.97861775777999,3.24802057444488,3.22248052201467,6.15912199821921,6.61074972359829,5.61220203263393,4.34155734777035,4.80102881926499,4.7388307014315,4.58052039476836,5.48407497349878,5.2594605981706,6.12172035761071,5.10567692760349,2.06341870201794,6.88326927092722,3.86379188064381,4.50437941082837,5.49454872801795,4.71610433973945,1.00314420807073,9.03602948187307,8.74617949363636,13.7494923225455,16.6697586873377,8.22099023724771,11.3309084608455,7.42524750254986,13.0593148935024,16.3131267234314,12.4262474820437,15.1529527472898,11.1726964552289,11.0976843740187,6.07766792670735,9.22297915563122,5.33146174505041,5.778414922842,5.97501665992793,3.20919209591815,5.30664144703975,6.59046179714623,6.22466926574051,7.21039607518095,7.49094283136971,8.04096565378586,8.57328644309533,7.88013416425017,7.13764115715709,7.82963211526283,4.56316652416632,4.4573002810104,5.14679837862079,5.7224685587357,5.52316383202848,5.45834406408918,5.753793336634,6.95126296916536,6.57674278594607,8.01244271690584,5.05028044491965,6.76219603307793,7.38783617816726,6.13846564754534,7.43696837692637,7.71626443924566,11.4912865851455,7.01794825336225,8.16510005383534,6.69509162240952,4.41182838239031,3.94175320554716|short_description=p2@Csnk1e}} | ||
|EntrezGene=27373 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=A8Y308,Q9JMK2,A2ABP1 | |||
|association_with_transcript=0bp_to_NM_013767,uc007wtl.2,uc011zwb.1_5end | |||
|description=CAGE_peak_2_at_Csnk1e_5end | |||
|id=chr15:79272439..79272495,- | |||
|ontology_enrichment_celltype=CL:0000540!6.14e-12!33;CL:0000047!6.14e-12!33;CL:0000031!6.14e-12!33;CL:0000404!6.14e-12!33;CL:0000117!1.60e-11!23;CL:0000337!1.60e-11!23;CL:0000393!3.75e-10!39;CL:0000211!3.75e-10!39;CL:0002319!2.40e-09!43;CL:0000221!5.42e-09!44;CL:0000133!5.42e-09!44;CL:0000055!1.61e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.10e-12,33;CL:0000047,6.10e-12,33;CL:0000031,6.10e-12,33;CL:0000404,6.10e-12,33;CL:0000117,1.59e-11,23;CL:0000337,1.59e-11,23;CL:0000393,3.74e-10,39;CL:0000211,3.74e-10,39;CL:0002319,2.23e-09,43;CL:0000221,5.05e-09,44;CL:0000133,5.05e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.24e-18!75;UBERON:0001016!3.24e-18!75;UBERON:0004121!6.33e-18!102;UBERON:0000924!6.33e-18!102;UBERON:0006601!6.33e-18!102;UBERON:0001017!2.08e-17!73;UBERON:0005743!2.08e-17!73;UBERON:0000033!1.77e-14!63;UBERON:0002346!2.42e-14!71;UBERON:0003075!2.42e-14!71;UBERON:0007284!2.42e-14!71;UBERON:0000955!4.57e-14!50;UBERON:0006238!4.57e-14!50;UBERON:0002020!5.63e-14!34;UBERON:0003056!6.99e-14!49;UBERON:0001049!9.37e-14!52;UBERON:0005068!9.37e-14!52;UBERON:0006241!9.37e-14!52;UBERON:0007135!9.37e-14!52;UBERON:0002616!1.69e-13!49;UBERON:0002791!3.03e-12!29;UBERON:0003528!3.03e-12!29;UBERON:0001893!3.03e-12!29;UBERON:0003080!3.95e-12!40;UBERON:0002780!1.23e-11!39;UBERON:0001890!1.23e-11!39;UBERON:0006240!1.23e-11!39;UBERON:0000153!4.51e-10!94;UBERON:0007811!1.25e-09!86;UBERON:0000956!2.16e-09!21;UBERON:0001869!2.16e-09!21;UBERON:0000203!2.16e-09!21;UBERON:0002619!5.18e-07!17;UBERON:0000025!9.78e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.91e-19,95;UBERON:0000924,1.91e-19,95;UBERON:0006601,1.91e-19,95;UBERON:0001016,2.96e-18,75;UBERON:0001017,1.90e-17,73;UBERON:0002346,3.68e-16,64;UBERON:0003075,3.68e-16,64;UBERON:0007284,3.68e-16,64;UBERON:0010371,6.67e-16,73;UBERON:0010314,2.30e-15,92;UBERON:0000073,2.53e-15,54;UBERON:0002020,5.59e-14,34;UBERON:0003056,6.95e-14,49;UBERON:0001049,9.30e-14,52;UBERON:0005068,9.30e-14,52;UBERON:0006241,9.30e-14,52;UBERON:0007135,9.30e-14,52;UBERON:0000955,6.27e-13,47;UBERON:0006238,6.27e-13,47;UBERON:0002616,2.26e-12,46;UBERON:0003528,3.01e-12,29;UBERON:0002791,3.01e-12,29;UBERON:0001893,3.01e-12,29;UBERON:0003080,3.92e-12,40;UBERON:0002780,1.22e-11,39;UBERON:0001890,1.22e-11,39;UBERON:0006240,1.22e-11,39;UBERON:0000956,2.15e-09,21;UBERON:0001869,2.15e-09,21;UBERON:0000203,2.15e-09,21;UBERON:0002619,5.16e-07,17 | |||
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| |||
|short_description=p2@Csnk1e | |||
}} |
Revision as of 11:10, 13 September 2013
Short description: | p2@Csnk1e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Csnk1e_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_NM_013767, uc007wtl.2, uc011zwb.1_5end |
EntrezGene: | Csnk1e |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.10e-12 | 33 |
neuronal stem cell | 6.10e-12 | 33 |
neuroblast | 6.10e-12 | 33 |
electrically signaling cell | 6.10e-12 | 33 |
CNS neuron (sensu Vertebrata) | 1.59e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.59e-11 | 23 |
electrically responsive cell | 3.74e-10 | 39 |
electrically active cell | 3.74e-10 | 39 |
neural cell | 2.23e-09 | 43 |
ectodermal cell | 5.05e-09 | 44 |
neurectodermal cell | 5.05e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.91e-19 | 95 |
ectoderm | 1.91e-19 | 95 |
presumptive ectoderm | 1.91e-19 | 95 |
nervous system | 2.96e-18 | 75 |
central nervous system | 1.90e-17 | 73 |
neurectoderm | 3.68e-16 | 64 |
neural plate | 3.68e-16 | 64 |
presumptive neural plate | 3.68e-16 | 64 |
ecto-epithelium | 6.67e-16 | 73 |
structure with developmental contribution from neural crest | 2.30e-15 | 92 |
regional part of nervous system | 2.53e-15 | 54 |
gray matter | 5.59e-14 | 34 |
pre-chordal neural plate | 6.95e-14 | 49 |
neural tube | 9.30e-14 | 52 |
neural rod | 9.30e-14 | 52 |
future spinal cord | 9.30e-14 | 52 |
neural keel | 9.30e-14 | 52 |
brain | 6.27e-13 | 47 |
future brain | 6.27e-13 | 47 |
regional part of brain | 2.26e-12 | 46 |
brain grey matter | 3.01e-12 | 29 |
regional part of telencephalon | 3.01e-12 | 29 |
telencephalon | 3.01e-12 | 29 |
anterior neural tube | 3.92e-12 | 40 |
regional part of forebrain | 1.22e-11 | 39 |
forebrain | 1.22e-11 | 39 |
future forebrain | 1.22e-11 | 39 |
cerebral cortex | 2.15e-09 | 21 |
cerebral hemisphere | 2.15e-09 | 21 |
pallium | 2.15e-09 | 21 |
regional part of cerebral cortex | 5.16e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.