FFCP PHASE1:Hg19::chr4:41216663..41216670,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=323|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=582|TSSclassifier=S|UniProt=B4DJ88,B4E2F2,Q92870,E9PG87|association_with_transcript=-28bp_to_ENST00000295974,NM_001166050,NM_004307,NM_173075,uc003gvl.2,uc003gvm.2,uc003gvn.2_5end|description=CAGE_peak_12_at_APBB2_5end|id=chr4:41216663..41216670,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000945;1.54e-10;24|ontology_enrichment_celltype_v019_2=CL:0000945,1.34e-10,24;CL:0000826,1.34e-10,24;CL:0000838,2.19e-07,52;CL:0000542,3.03e-07,53;CL:0000051,3.03e-07,53|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:630;1.41e-16;1!DOID:0050177;1.41e-16;1!DOID:0050427;1.41e-16;1!DOID:0060058;4.06e-07;10|ontology_enrichment_disease_v019_2=DOID:630,1.04e-16,1;DOID:0050177,1.04e-16,1;DOID:0050427,1.04e-16,1;DOID:0060058,3.54e-07,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000996;1.41e-16;1!UBERON:0007195;1.41e-16;1|ontology_enrichment_uberon_v019_2=UBERON:0000996,8.86e-17,1;UBERON:0007195,1.41e-16,1|phase1_expression=0,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.61130724598361,0.410502947249729,0.708397031823113,0,0,0,0,0,0,2.94375362205146,1.42169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,1.06729878806013,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0.622422070799533,0.269421344139376,0,0,0,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0,0.277064115484183,0.877955241761676,0,0,0,0,0.427114777637135,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0.169560592310488,0.386521706326594,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,1.1240175325762,0,0,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,1.47798971368783,0.528290604079356,0,0.720599767084807,0.50496973370552,0,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.183138929636687,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0,0.638063562472921,0,0.929691098594572,0,0.6970372701606,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0.577076851905779,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0.879049075631364,0.121360521749513,0,0,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0,1.10776324914963,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0.557694977114413,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,1.02193298195737,0,0,0,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0,0,0.889563386041866,0.617819694732514,0.626531697032732,0.134802265961354,0,0,0,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0.164230914106418,0.290967049465258,0,0,0.137041924646751,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0.14405479798815,0,0,0.271808412147228,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0.599037001496973,0,0,0.134366944973453,0,0,0.157566364614447,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.364497339948148,0,0,0.104909176269996,0.105600336519406,0,0.575745591958336,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0.5013797880454,0.61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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=323 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=582 | |||
|TSSclassifier=S | |||
|UniProt=B4DJ88,B4E2F2,Q92870,E9PG87 | |||
|association_with_transcript=-28bp_to_ENST00000295974,NM_001166050,NM_004307,NM_173075,uc003gvl.2,uc003gvm.2,uc003gvn.2_5end | |||
|description=CAGE_peak_12_at_APBB2_5end | |||
|id=chr4:41216663..41216670,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.54e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.34e-10,24;CL:0000826,1.34e-10,24;CL:0000838,2.19e-07,52;CL:0000542,3.03e-07,53;CL:0000051,3.03e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.41e-16;1!DOID:0050177;1.41e-16;1!DOID:0050427;1.41e-16;1!DOID:0060058;4.06e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.04e-16,1;DOID:0050177,1.04e-16,1;DOID:0050427,1.04e-16,1;DOID:0060058,3.54e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;1.41e-16;1!UBERON:0007195;1.41e-16;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,8.86e-17,1;UBERON:0007195,1.41e-16,1 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.61130724598361,0.410502947249729,0.708397031823113,0,0,0,0,0,0,2.94375362205146,1.42169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,1.06729878806013,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0.622422070799533,0.269421344139376,0,0,0,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0,0.277064115484183,0.877955241761676,0,0,0,0,0.427114777637135,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0.169560592310488,0.386521706326594,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,1.1240175325762,0,0,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,1.47798971368783,0.528290604079356,0,0.720599767084807,0.50496973370552,0,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.183138929636687,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0,0.638063562472921,0,0.929691098594572,0,0.6970372701606,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0.577076851905779,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0.879049075631364,0.121360521749513,0,0,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0,1.10776324914963,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0.557694977114413,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,1.02193298195737,0,0,0,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0,0,0.889563386041866,0.617819694732514,0.626531697032732,0.134802265961354,0,0,0,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0.164230914106418,0.290967049465258,0,0,0.137041924646751,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0.14405479798815,0,0,0.271808412147228,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0.599037001496973,0,0,0.134366944973453,0,0,0.157566364614447,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.364497339948148,0,0,0.104909176269996,0.105600336519406,0,0.575745591958336,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0.5013797880454,0.612691153526923,0,0,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0.813741466409323,0,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.276516872303462,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0,0.39997479170986,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76016107504387,0,0,0,0.0642292250964595,0,0,0,0,0.276629009856872,0,0,0.0981477185010256,0,0,0,0,0.690359926060101,0,0.150420656698515,0,0,0,0,0,0.337687923091973,0.781078098613847,0,0.317079050969534,1.09394961803644,0,0,0,0.383287282918786,0,0,0.606965604236632,0.455324382702595,0,0,0.171488009437418,0.339848664884159,0.197318320688547,0.236387681767936,0.111231401892069,0.078493092850514,0,0,0.913158720509496,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0.426067023795788,0.846774100381858,0,0,0,0,0.098150233615243,0,0,0.205325613712494,0,0,0.701818390386317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1699271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| |||
|short_description=p12@APBB2 | |||
}} |
Revision as of 10:54, 13 September 2013
Short description: | p12@APBB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_APBB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000295974, NM_001166050, NM_004307, NM_173075, uc003gvl.2, uc003gvm.2, uc003gvn.2_5end |
EntrezGene: | APBB2 |
HGNC: | 582 |
UniProt: | B4DJ88B4E2F2Q92870E9PG87 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.34e-10 | 24 |
pro-B cell | 1.34e-10 | 24 |
lymphoid lineage restricted progenitor cell | 2.19e-07 | 52 |
lymphocyte | 3.03e-07 | 53 |
common lymphoid progenitor | 3.03e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
vagina | 8.86e-17 | 1 |
stroma of bone marrow | 1.41e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.04e-16 | 1 |
monogenic disease | 1.04e-16 | 1 |
xeroderma pigmentosum | 1.04e-16 | 1 |
lymphoma | 3.54e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.