FFCP PHASE1:Mm9::chr15:73253465..73253485,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14083|HGNC=|MCL_coexpression_id=2|UniProt=P34152,F8WI77,E9QMQ8|association_with_transcript=135bp_to_ENSMUST00000057684,ENSMUST00000068756,ENSMUST00000080736,ENSMUST00000110033,ENSMUST00000110036,ENSMUST00000170939,NM_001130409,NM_007982,uc007wbw.2,uc007wbx.2,uc007wbz.2,uc007wca.1,uc011ztu.1_5end|description=CAGE_peak_3_at_Ptk2_5end|id=chr15:73253465..73253485,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!3.51e-08!10;UBERON:0000411!3.51e-08!10;UBERON:0001950!3.51e-08!10;UBERON:0000468!2.84e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.44e-08,10;UBERON:0000411,2.44e-08,10;UBERON:0001950,2.44e-08,10|phase1_expression=2.5623815536767,0.348975407639361,1.36499771816861,2.11724947914781,1.00179145989269,0.503637815735669,1.40167584357315,0.258246646883153,0.281577444303333,0,0,0.159544317990673,0.342401459862411,0,0,0.404950534779652,0,0.315462165358238,0.411343300817216,0.84877930359606,3.99703463710028,0,0,0.799962113967033,0.91763712426868,1.14846392823004,0,0.646413698057667,1.14014051673824,0.504060259519861,1.33038306393183,3.17515336729816,3.69038872550742,0,0.288851619751275,0.498703936075477,0.612508068787107,0,0,0,0,0,0,1.88845226963366,1.52065396829272,2.38610777810186,0,0.436050312760893,0,0.58328969722285,0.419959264876088,0,0.167782606057736,0,0,1.28629718017973,1.71920063963254,3.09403255366465,1.61853168687678,1.5869729378161,4.43681982454325,0,0,0,0,0.7104801149461,0.898800331555214,0.384218305321555,0.829516898467821,0.675029691658453,0.420649922702764,1.42825492201902,1.10434270475807,0.857435594504678,1.15014565221884,0.919218786610021,0,3.19218345212969,3.68655679814984,1.58263545276233,2.28719109006024,1.04182674111352,1.11673199600552,2.8138130501584,3.81995619442025,2.35702868378934,1.85083185038834,1.86399445825301,2.42323818666189,1.058001841495,7.24661221754194,1.72084775396277,1.3599426674155,0,0.649776417447669,0.896053774194671,0.842666520790511,3.57903677413921,1.55871602761721,4.24007489412408,1.97180787687353,0,5.09610479413291,0,1.29894624606728,1.01343946190039,1.51657333504435,1.48439043634778,1.8125651855302,2.22663208597237,2.08182392119363,0.304465478312141,2.99800146432876,0.753613202763113,3.05730638552832,1.13099932196708,4.44950941921873,2.74738778147832,0,1.7794353494215,1.32504911076236,0.969750506270444,5.59175283654366,1.17112318804619,0.83778682725382,1.78819938646014,0,0,0,4.49371918214468,8.6925114535539,1.13088916901578,19.1206752211504,15.3429274398198,5.61027720310812,4.54275536589721,2.13862664085664,1.61729061793121,3.53811861807145,2.52530227063769,5.33493816147085,2.29902104433473,2.70093194708024,2.10986744970001,2.17716797284249,1.5373646434182,2.34254311399322,2.58703370739016,2.58681591519411,3.40390944302075,2.11141348996739,2.41115305670332,3.33656699070717,2.43776516565517,3.2925141825271,2.18937693500343,0,0,0,3.52113813310353,3.28336483973535,3.24111710629827,6.15536312521547,2.55793501271625,3.39387648352232,3.0229412817553,3.48755421819505,3.38619492864792,2.46839774870221,3.447516745661,4.29664690593035,5.11699955988663,4.17145219052996,3.22095405024892,7.99101804543684,0.92614151141356,1.98251269790279,1.58670339998127,3.83918850963421,2.55460339046482,1.9330119198314,2.8235693447268,1.55664630691409,1.33157938278791,0,3.62337700392824,1.75934646160189,1.59165177632921,2.53453313254856,0,1.51296634912286,1.39398891278057,1.13800740571849,1.71372768914593,1.1270773567308,1.4255592949172,3.49114476901726,2.52488951605147,3.35153646758564,2.80459281161244,2.82597710114475,3.45512058981041,0,0.83422552858047,0.786235980452812,0.899448449539415,0.811440485554012,0.241177159752417,0.763877555344259,0.863088412352432,1.45921704097532,0,0,2.97712758134803,1.24815069245824,1.26289438973556,0.896987067609561,0.482443521363367,5.91210208533135,1.13694847062291,4.23708938749267,3.39490171550376,1.64283173801951,4.02015017860358,3.80869825417622,4.87834119644497,6.14777062014145,6.64394068946325,4.78364305972461,6.22680595919804,4.14443956478149,5.49666422609744,0,0,4.42587845717133,3.31124095565679,2.56880943980467,1.75817529888305,3.27869890753351,2.7771801992481,2.83957397474631,1.56175497718655,1.72338718186239,2.15071918157297,1.33679204449436,1.13230612315533,1.61924280669958,2.04579100537918,1.58115111178609,10.2822821254978,2.12910127812403,0.712262414669021,1.62886959353576,3.95928295134085,9.2921596837974,2.6705869977048,2.11626489875326,5.09233715340925,2.06711325016541,4.91896236710284,4.9101375701962,4.72593848320757,3.92147116223193,3.79244109522979,3.16255825724996,8.25084345985495,4.42571487479924,2.34079422240703,1.4229455216103,3.00071849044229,3.01478397191865,1.96205699362278,1.81003922662333,1.522324745573,5.86679270159276,8.26145076368899,1.54369878638473,2.14352128823924,3.06782410722221,2.35220407219808,1.67121281604391,1.80554989719567,0.874442509889552,2.59595422814714,0.34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| ||
|EntrezGene=14083 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=P34152,F8WI77,E9QMQ8 | |||
|association_with_transcript=135bp_to_ENSMUST00000057684,ENSMUST00000068756,ENSMUST00000080736,ENSMUST00000110033,ENSMUST00000110036,ENSMUST00000170939,NM_001130409,NM_007982,uc007wbw.2,uc007wbx.2,uc007wbz.2,uc007wca.1,uc011ztu.1_5end | |||
|description=CAGE_peak_3_at_Ptk2_5end | |||
|id=chr15:73253465..73253485,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!3.51e-08!10;UBERON:0000411!3.51e-08!10;UBERON:0001950!3.51e-08!10;UBERON:0000468!2.84e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.44e-08,10;UBERON:0000411,2.44e-08,10;UBERON:0001950,2.44e-08,10 | |||
|phase1_expression=2.5623815536767,0.348975407639361,1.36499771816861,2.11724947914781,1.00179145989269,0.503637815735669,1.40167584357315,0.258246646883153,0.281577444303333,0,0,0.159544317990673,0.342401459862411,0,0,0.404950534779652,0,0.315462165358238,0.411343300817216,0.84877930359606,3.99703463710028,0,0,0.799962113967033,0.91763712426868,1.14846392823004,0,0.646413698057667,1.14014051673824,0.504060259519861,1.33038306393183,3.17515336729816,3.69038872550742,0,0.288851619751275,0.498703936075477,0.612508068787107,0,0,0,0,0,0,1.88845226963366,1.52065396829272,2.38610777810186,0,0.436050312760893,0,0.58328969722285,0.419959264876088,0,0.167782606057736,0,0,1.28629718017973,1.71920063963254,3.09403255366465,1.61853168687678,1.5869729378161,4.43681982454325,0,0,0,0,0.7104801149461,0.898800331555214,0.384218305321555,0.829516898467821,0.675029691658453,0.420649922702764,1.42825492201902,1.10434270475807,0.857435594504678,1.15014565221884,0.919218786610021,0,3.19218345212969,3.68655679814984,1.58263545276233,2.28719109006024,1.04182674111352,1.11673199600552,2.8138130501584,3.81995619442025,2.35702868378934,1.85083185038834,1.86399445825301,2.42323818666189,1.058001841495,7.24661221754194,1.72084775396277,1.3599426674155,0,0.649776417447669,0.896053774194671,0.842666520790511,3.57903677413921,1.55871602761721,4.24007489412408,1.97180787687353,0,5.09610479413291,0,1.29894624606728,1.01343946190039,1.51657333504435,1.48439043634778,1.8125651855302,2.22663208597237,2.08182392119363,0.304465478312141,2.99800146432876,0.753613202763113,3.05730638552832,1.13099932196708,4.44950941921873,2.74738778147832,0,1.7794353494215,1.32504911076236,0.969750506270444,5.59175283654366,1.17112318804619,0.83778682725382,1.78819938646014,0,0,0,4.49371918214468,8.6925114535539,1.13088916901578,19.1206752211504,15.3429274398198,5.61027720310812,4.54275536589721,2.13862664085664,1.61729061793121,3.53811861807145,2.52530227063769,5.33493816147085,2.29902104433473,2.70093194708024,2.10986744970001,2.17716797284249,1.5373646434182,2.34254311399322,2.58703370739016,2.58681591519411,3.40390944302075,2.11141348996739,2.41115305670332,3.33656699070717,2.43776516565517,3.2925141825271,2.18937693500343,0,0,0,3.52113813310353,3.28336483973535,3.24111710629827,6.15536312521547,2.55793501271625,3.39387648352232,3.0229412817553,3.48755421819505,3.38619492864792,2.46839774870221,3.447516745661,4.29664690593035,5.11699955988663,4.17145219052996,3.22095405024892,7.99101804543684,0.92614151141356,1.98251269790279,1.58670339998127,3.83918850963421,2.55460339046482,1.9330119198314,2.8235693447268,1.55664630691409,1.33157938278791,0,3.62337700392824,1.75934646160189,1.59165177632921,2.53453313254856,0,1.51296634912286,1.39398891278057,1.13800740571849,1.71372768914593,1.1270773567308,1.4255592949172,3.49114476901726,2.52488951605147,3.35153646758564,2.80459281161244,2.82597710114475,3.45512058981041,0,0.83422552858047,0.786235980452812,0.899448449539415,0.811440485554012,0.241177159752417,0.763877555344259,0.863088412352432,1.45921704097532,0,0,2.97712758134803,1.24815069245824,1.26289438973556,0.896987067609561,0.482443521363367,5.91210208533135,1.13694847062291,4.23708938749267,3.39490171550376,1.64283173801951,4.02015017860358,3.80869825417622,4.87834119644497,6.14777062014145,6.64394068946325,4.78364305972461,6.22680595919804,4.14443956478149,5.49666422609744,0,0,4.42587845717133,3.31124095565679,2.56880943980467,1.75817529888305,3.27869890753351,2.7771801992481,2.83957397474631,1.56175497718655,1.72338718186239,2.15071918157297,1.33679204449436,1.13230612315533,1.61924280669958,2.04579100537918,1.58115111178609,10.2822821254978,2.12910127812403,0.712262414669021,1.62886959353576,3.95928295134085,9.2921596837974,2.6705869977048,2.11626489875326,5.09233715340925,2.06711325016541,4.91896236710284,4.9101375701962,4.72593848320757,3.92147116223193,3.79244109522979,3.16255825724996,8.25084345985495,4.42571487479924,2.34079422240703,1.4229455216103,3.00071849044229,3.01478397191865,1.96205699362278,1.81003922662333,1.522324745573,5.86679270159276,8.26145076368899,1.54369878638473,2.14352128823924,3.06782410722221,2.35220407219808,1.67121281604391,1.80554989719567,0.874442509889552,2.59595422814714,0.341741761595705,1.23832120777933,1.11116716421827,0.753473828018764,0.546776910884101,0.686334519619568,0.169978429993855,0,0,0.954670618015114,2.53068794864908,1.62655573701479,1.72808545314882,1.88179466413022,2.40198820120795,1.88810084938749,2.72756403893609,2.35580347785627,2.59229946583586,1.86401793926078,2.25477175473676,2.8408143748356,1.82004339502807,2.33341426012857,2.71235629303235,2.70329800785245,3.0512882047896,3.6457227756306,7.44501345422547,5.07326653734613,3.45636007509439,0.632022241256357,1.62180172232131,0.513554785824136,0.649604114888975,0.358053391334963,0.198681354781265,0.600977247599844,0.295379054349154,0.605798699688886,0.457240839929999,0.604957110821043,0.0974578807397524,0.288635524920988,0.584384510907845,1.58711268530648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| |||
|short_description=p3@Ptk2 | |||
}} | |||
Revision as of 10:49, 13 September 2013
| Short description: | p3@Ptk2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Ptk2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2 |
| Association with transcript: | 135bp_to_ENSMUST00000057684, ENSMUST00000068756, ENSMUST00000080736, ENSMUST00000110033, ENSMUST00000110036, ENSMUST00000170939, NM_001130409, NM_007982, uc007wbw.2, uc007wbx.2, uc007wbz.2, uc007wca.1, uc011ztu.1_5end |
| EntrezGene: | Ptk2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 2.44e-08 | 10 |
| visual cortex | 2.44e-08 | 10 |
| neocortex | 2.44e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
