FFCP PHASE1:Hg19::chr4:37892279..37892320,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23216|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11578|TSSclassifier=S|UniProt=B9A6J6,Q7Z6H2,Q86TI0,Q8NC59|association_with_transcript=-384bp_to_NM_001253912,NM_015173_5end|description=CAGE_peak_14_at_TBC1D1_5end|id=chr4:37892279..37892320,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004140;1.88e-21;1!UBERON:0010227;5.16e-21;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;3.34e-11;2|ontology_enrichment_disease_v019_2=DOID:114,2.73e-11,2|ontology_enrichment_uberon=UBERON:0007023!6.82e-64!115;UBERON:0001049!2.65e-32!57;UBERON:0005068!2.65e-32!57;UBERON:0006241!2.65e-32!57;UBERON:0007135!2.65e-32!57;UBERON:0002616!1.35e-28!59;UBERON:0003080!3.45e-28!42;UBERON:0003075!2.11e-27!86;UBERON:0007284!2.11e-27!86;UBERON:0001893!2.43e-26!34;UBERON:0002780!2.97e-26!41;UBERON:0001890!2.97e-26!41;UBERON:0006240!2.97e-26!41;UBERON:0002346!8.77e-26!90;UBERON:0001869!1.63e-25!32;UBERON:0005743!4.29e-25!86;UBERON:0000955!6.54e-25!69;UBERON:0006238!6.54e-25!69;UBERON:0001017!8.26e-25!82;UBERON:0002791!2.58e-24!33;UBERON:0002020!1.17e-23!34;UBERON:0003528!1.17e-23!34;UBERON:0001950!4.58e-23!20;UBERON:0000073!6.33e-22!94;UBERON:0001016!6.33e-22!94;UBERON:0002619!9.66e-21!22;UBERON:0003056!1.98e-19!61;UBERON:0000956!6.26e-18!25;UBERON:0000203!6.26e-18!25;UBERON:0000200!1.94e-17!6;UBERON:0000153!1.69e-16!129;UBERON:0007811!1.69e-16!129;UBERON:0000033!2.66e-15!123;UBERON:0004121!3.74e-12!169;UBERON:0000924!1.15e-11!173;UBERON:0006601!1.15e-11!173;UBERON:0000369!8.81e-11!4;UBERON:0002435!8.81e-11!4;UBERON:0000204!8.81e-11!4;UBERON:0010082!8.81e-11!4;UBERON:0000025!1.82e-10!194;UBERON:0004111!6.29e-10!241;UBERON:0002771!1.71e-09!3;UBERON:0001871!1.24e-08!7;UBERON:0000477!1.63e-08!286;UBERON:0005383!1.99e-08!3;UBERON:0005382!1.99e-08!3;UBERON:0000064!2.86e-08!219;UBERON:0000062!1.59e-07!511;UBERON:0002308!3.62e-07!9;UBERON:0000125!3.62e-07!9;UBERON:0001870!3.96e-07!2;UBERON:0000007!4.08e-07!2;UBERON:0002420!4.10e-07!9;UBERON:0007245!4.10e-07!9;UBERON:0010009!4.10e-07!9;UBERON:0010011!4.10e-07!9;UBERON:0000454!4.10e-07!9;UBERON:0000481!8.73e-07!347|ontology_enrichment_uberon_v019=UBERON:0002702;1.34e-40;2!UBERON:0001870;1.82e-27;3!UBERON:0002079;5.16e-21;1!UBERON:0000200;2.84e-14;6!UBERON:0007100;3.90e-13;25!UBERON:0000007;3.34e-11;2!UBERON:0002081;3.34e-11;2!UBERON:0001723;6.78e-08;3!UBERON:0004151;6.78e-08;3!UBERON:0001033;6.78e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002702,2.46e-40,2;UBERON:0001870,2.72e-27,3;UBERON:0002079,2.82e-21,1;UBERON:0000200,3.48e-14,6;UBERON:0007100,2.96e-12,27;UBERON:0002081,2.47e-11,2;UBERON:0010227,2.47e-11,2;UBERON:0000007,3.35e-11,2;UBERON:0004151,5.54e-08,3;UBERON:0001723,7.76e-08,3;UBERON:0001033,7.76e-08,3;UBERON:0010056,7.76e-08,3;UBERON:0003103,1.91e-07,68|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0.885741385813839,0.120596438625408,0,0.663475559587348,0.295547618953547,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,1.22206028986725,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0.823040347426423,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.916641696046735,0,0.199679000498991,1.28767814440971,2.23171457441873,2.88888931692923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485996453264197,0,0,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,2.65820453990096,0.732157589411779,1.001527445652,0,0,0.37257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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23216 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11578 | |||
|TSSclassifier=S | |||
|UniProt=B9A6J6,Q7Z6H2,Q86TI0,Q8NC59 | |||
|association_with_transcript=-384bp_to_NM_001253912,NM_015173_5end | |||
|description=CAGE_peak_14_at_TBC1D1_5end | |||
|id=chr4:37892279..37892320,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.88e-21;1!UBERON:0010227;5.16e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.82e-64!115;UBERON:0001049!2.65e-32!57;UBERON:0005068!2.65e-32!57;UBERON:0006241!2.65e-32!57;UBERON:0007135!2.65e-32!57;UBERON:0002616!1.35e-28!59;UBERON:0003080!3.45e-28!42;UBERON:0003075!2.11e-27!86;UBERON:0007284!2.11e-27!86;UBERON:0001893!2.43e-26!34;UBERON:0002780!2.97e-26!41;UBERON:0001890!2.97e-26!41;UBERON:0006240!2.97e-26!41;UBERON:0002346!8.77e-26!90;UBERON:0001869!1.63e-25!32;UBERON:0005743!4.29e-25!86;UBERON:0000955!6.54e-25!69;UBERON:0006238!6.54e-25!69;UBERON:0001017!8.26e-25!82;UBERON:0002791!2.58e-24!33;UBERON:0002020!1.17e-23!34;UBERON:0003528!1.17e-23!34;UBERON:0001950!4.58e-23!20;UBERON:0000073!6.33e-22!94;UBERON:0001016!6.33e-22!94;UBERON:0002619!9.66e-21!22;UBERON:0003056!1.98e-19!61;UBERON:0000956!6.26e-18!25;UBERON:0000203!6.26e-18!25;UBERON:0000200!1.94e-17!6;UBERON:0000153!1.69e-16!129;UBERON:0007811!1.69e-16!129;UBERON:0000033!2.66e-15!123;UBERON:0004121!3.74e-12!169;UBERON:0000924!1.15e-11!173;UBERON:0006601!1.15e-11!173;UBERON:0000369!8.81e-11!4;UBERON:0002435!8.81e-11!4;UBERON:0000204!8.81e-11!4;UBERON:0010082!8.81e-11!4;UBERON:0000025!1.82e-10!194;UBERON:0004111!6.29e-10!241;UBERON:0002771!1.71e-09!3;UBERON:0001871!1.24e-08!7;UBERON:0000477!1.63e-08!286;UBERON:0005383!1.99e-08!3;UBERON:0005382!1.99e-08!3;UBERON:0000064!2.86e-08!219;UBERON:0000062!1.59e-07!511;UBERON:0002308!3.62e-07!9;UBERON:0000125!3.62e-07!9;UBERON:0001870!3.96e-07!2;UBERON:0000007!4.08e-07!2;UBERON:0002420!4.10e-07!9;UBERON:0007245!4.10e-07!9;UBERON:0010009!4.10e-07!9;UBERON:0010011!4.10e-07!9;UBERON:0000454!4.10e-07!9;UBERON:0000481!8.73e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;1.34e-40;2!UBERON:0001870;1.82e-27;3!UBERON:0002079;5.16e-21;1!UBERON:0000200;2.84e-14;6!UBERON:0007100;3.90e-13;25!UBERON:0000007;3.34e-11;2!UBERON:0002081;3.34e-11;2!UBERON:0001723;6.78e-08;3!UBERON:0004151;6.78e-08;3!UBERON:0001033;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,2.46e-40,2;UBERON:0001870,2.72e-27,3;UBERON:0002079,2.82e-21,1;UBERON:0000200,3.48e-14,6;UBERON:0007100,2.96e-12,27;UBERON:0002081,2.47e-11,2;UBERON:0010227,2.47e-11,2;UBERON:0000007,3.35e-11,2;UBERON:0004151,5.54e-08,3;UBERON:0001723,7.76e-08,3;UBERON:0001033,7.76e-08,3;UBERON:0010056,7.76e-08,3;UBERON:0003103,1.91e-07,68 | |||
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|short_description=p14@TBC1D1 | |||
}} |
Revision as of 10:46, 13 September 2013
Short description: | p14@TBC1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_TBC1D1_5end |
Coexpression cluster: | NA |
Association with transcript: | -384bp_to_NM_001253912, NM_015173_5end |
EntrezGene: | TBC1D1 |
HGNC: | 11578 |
UniProt: | B9A6J6Q7Z6H2Q86TI0Q8NC59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 2.46e-40 | 2 |
frontal cortex | 2.72e-27 | 3 |
left cardiac atrium | 2.82e-21 | 1 |
gyrus | 3.48e-14 | 6 |
primary circulatory organ | 2.96e-12 | 27 |
cardiac atrium | 2.47e-11 | 2 |
future cardiac atrium | 2.47e-11 | 2 |
pituitary gland | 3.35e-11 | 2 |
cardiac chamber | 5.54e-08 | 3 |
tongue | 7.76e-08 | 3 |
gustatory system | 7.76e-08 | 3 |
future tongue | 7.76e-08 | 3 |
compound organ | 1.91e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.73e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.