FFCP PHASE1:Mm9::chr15:62095969..62095973,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:62095969..62095973,+|id=chr15:62095969..62095973,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,7.89e-30,3;CL:0000359,7.89e-30,3;CL:0002539,7.89e-30,3;CL:0000514,7.89e-30,3;CL:0000680,1.58e-15,6;CL:0000187,1.58e-15,6;CL:0000056,1.58e-15,6;CL:0000222,1.79e-13,7;CL:0000355,1.01e-10,9;CL:0002293,1.13e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,7.89e-30,3;UBERON:0004237,7.89e-30,3;UBERON:0004695,7.89e-30,3;UBERON:0002111,7.89e-30,3;UBERON:0004178,7.89e-30,3;UBERON:0000947,1.08e-22,4;UBERON:0001637,1.08e-22,4;UBERON:0004573,1.08e-22,4;UBERON:0003509,1.08e-22,4;UBERON:0004571,1.08e-22,4;UBERON:0010191,1.08e-22,4;UBERON:0004572,1.08e-22,4;UBERON:0000055,2.13e-18,5;UBERON:0007500,2.13e-18,5;UBERON:0001981,2.13e-18,5;UBERON:0002049,2.13e-18,5;UBERON:0007798,2.13e-18,5;UBERON:0004537,2.13e-18,5;UBERON:0006965,2.13e-18,5;UBERON:0001134,1.01e-10,9;UBERON:0002036,1.01e-10,9;UBERON:0002385,1.01e-10,9;UBERON:0000486,1.01e-10,9;UBERON:0007503,1.01e-10,9;UBERON:0001015,1.01e-10,9;UBERON:0002329,1.01e-10,9;UBERON:0003082,1.01e-10,9;UBERON:0003059,1.01e-10,9;UBERON:0007282,1.01e-10,9;UBERON:0004290,1.01e-10,9;UBERON:0009618,1.01e-10,9;UBERON:0000383,9.34e-10,10;UBERON:0007524,5.79e-09,11;UBERON:0003077,5.79e-09,11;UBERON:0007285,5.79e-09,11|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,1.03703806693937,0.171200729931206,0.34968160967599,0,0.202475267389826,0,0,0,0.42438965179803,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,1.92616169317078,0.734187008646726,0,0,0,0,0.139986421625363,0,0,0,0.672187598284928,0,0.286533439938757,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0.259786004602869,0.70667914902068,0,0,2.54805239706646,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0,0,0.20778804455956,0.324482526135515,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0.102904612379284,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.468846746368813,0,0.504941854408746,0,0,0.215423397732799,0.477937595905104,0.222798674082394,0,0.809621403349789,0.584511715822624,0.790575555893047,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0.185194527369712,0.376736914009382,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0.503653849092235,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354951612318675,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr15:62095969..62095973,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:62095969..62095973,+ | |||
|id=chr15:62095969..62095973,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.89e-30,3;CL:0000359,7.89e-30,3;CL:0002539,7.89e-30,3;CL:0000514,7.89e-30,3;CL:0000680,1.58e-15,6;CL:0000187,1.58e-15,6;CL:0000056,1.58e-15,6;CL:0000222,1.79e-13,7;CL:0000355,1.01e-10,9;CL:0002293,1.13e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,7.89e-30,3;UBERON:0004237,7.89e-30,3;UBERON:0004695,7.89e-30,3;UBERON:0002111,7.89e-30,3;UBERON:0004178,7.89e-30,3;UBERON:0000947,1.08e-22,4;UBERON:0001637,1.08e-22,4;UBERON:0004573,1.08e-22,4;UBERON:0003509,1.08e-22,4;UBERON:0004571,1.08e-22,4;UBERON:0010191,1.08e-22,4;UBERON:0004572,1.08e-22,4;UBERON:0000055,2.13e-18,5;UBERON:0007500,2.13e-18,5;UBERON:0001981,2.13e-18,5;UBERON:0002049,2.13e-18,5;UBERON:0007798,2.13e-18,5;UBERON:0004537,2.13e-18,5;UBERON:0006965,2.13e-18,5;UBERON:0001134,1.01e-10,9;UBERON:0002036,1.01e-10,9;UBERON:0002385,1.01e-10,9;UBERON:0000486,1.01e-10,9;UBERON:0007503,1.01e-10,9;UBERON:0001015,1.01e-10,9;UBERON:0002329,1.01e-10,9;UBERON:0003082,1.01e-10,9;UBERON:0003059,1.01e-10,9;UBERON:0007282,1.01e-10,9;UBERON:0004290,1.01e-10,9;UBERON:0009618,1.01e-10,9;UBERON:0000383,9.34e-10,10;UBERON:0007524,5.79e-09,11;UBERON:0003077,5.79e-09,11;UBERON:0007285,5.79e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,1.03703806693937,0.171200729931206,0.34968160967599,0,0.202475267389826,0,0,0,0.42438965179803,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,1.92616169317078,0.734187008646726,0,0,0,0,0.139986421625363,0,0,0,0.672187598284928,0,0.286533439938757,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0.259786004602869,0.70667914902068,0,0,2.54805239706646,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0,0,0.20778804455956,0.324482526135515,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0.102904612379284,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.468846746368813,0,0.504941854408746,0,0,0.215423397732799,0.477937595905104,0.222798674082394,0,0.809621403349789,0.584511715822624,0.790575555893047,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0.185194527369712,0.376736914009382,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0.503653849092235,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354951612318675,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr15:62095969..62095973,+ | |||
}} |
Revision as of 10:41, 13 September 2013
Short description: | p@chr15:62095969..62095973, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:62095969..62095973, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.89e-30 | 3 |
vascular associated smooth muscle cell | 7.89e-30 | 3 |
aortic smooth muscle cell | 7.89e-30 | 3 |
smooth muscle myoblast | 7.89e-30 | 3 |
muscle precursor cell | 1.58e-15 | 6 |
muscle cell | 1.58e-15 | 6 |
myoblast | 1.58e-15 | 6 |
mesodermal cell | 1.79e-13 | 7 |
multi-potent skeletal muscle stem cell | 1.01e-10 | 9 |
epithelial cell of thymus | 1.13e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 7.89e-30 | 3 |
blood vessel smooth muscle | 7.89e-30 | 3 |
arterial system smooth muscle | 7.89e-30 | 3 |
artery smooth muscle tissue | 7.89e-30 | 3 |
aorta smooth muscle tissue | 7.89e-30 | 3 |
aorta | 1.08e-22 | 4 |
artery | 1.08e-22 | 4 |
systemic artery | 1.08e-22 | 4 |
arterial blood vessel | 1.08e-22 | 4 |
systemic arterial system | 1.08e-22 | 4 |
aortic system | 1.08e-22 | 4 |
arterial system | 1.08e-22 | 4 |
vessel | 2.13e-18 | 5 |
epithelial tube open at both ends | 2.13e-18 | 5 |
blood vessel | 2.13e-18 | 5 |
vasculature | 2.13e-18 | 5 |
vascular system | 2.13e-18 | 5 |
blood vasculature | 2.13e-18 | 5 |
vascular cord | 2.13e-18 | 5 |
skeletal muscle tissue | 1.01e-10 | 9 |
striated muscle tissue | 1.01e-10 | 9 |
muscle tissue | 1.01e-10 | 9 |
multilaminar epithelium | 1.01e-10 | 9 |
epithelial vesicle | 1.01e-10 | 9 |
musculature | 1.01e-10 | 9 |
somite | 1.01e-10 | 9 |
myotome | 1.01e-10 | 9 |
presomitic mesoderm | 1.01e-10 | 9 |
presumptive segmental plate | 1.01e-10 | 9 |
dermomyotome | 1.01e-10 | 9 |
trunk paraxial mesoderm | 1.01e-10 | 9 |
musculature of body | 9.34e-10 | 10 |
dense mesenchyme tissue | 5.79e-09 | 11 |
paraxial mesoderm | 5.79e-09 | 11 |
presumptive paraxial mesoderm | 5.79e-09 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.