FFCP PHASE1:Hg19::chr4:2814042..2814045,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6452|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10825|TSSclassifier=S|UniProt=|association_with_transcript=11bp_to_ENST00000435136_5end|description=CAGE_peak_15_at_SH3BP2_5end|id=chr4:2814042..2814045,+|ontology_enrichment_celltype=CL:0000037!6.25e-37!172;CL:0000566!6.25e-37!172;CL:0000988!1.91e-35!182;CL:0002032!1.97e-34!165;CL:0000837!1.97e-34!165;CL:0000738!1.25e-32!140;CL:0002087!8.98e-32!119;CL:0002031!5.11e-29!124;CL:0000838!1.84e-18!52;CL:0000542!7.97e-18!53;CL:0000051!7.97e-18!53;CL:0000763!1.27e-16!112;CL:0000049!1.27e-16!112;CL:0002057!1.02e-15!42;CL:0000766!1.59e-14!76;CL:0000860!7.43e-14!45;CL:0000557!6.53e-13!71;CL:0002194!1.84e-12!63;CL:0000576!1.84e-12!63;CL:0000040!1.84e-12!63;CL:0000559!1.84e-12!63;CL:0000839!2.70e-12!70;CL:0002009!1.14e-11!65;CL:0000791!1.95e-10!18;CL:0000789!1.95e-10!18;CL:0002420!1.95e-10!18;CL:0002419!1.95e-10!18;CL:0000790!1.95e-10!18;CL:0000625!4.11e-10!11;CL:0000071!9.02e-10!18;CL:0002546!9.02e-10!18;CL:0000084!1.57e-09!25;CL:0000827!1.57e-09!25;CL:0002139!2.43e-09!24;CL:0000945!6.92e-08!24;CL:0000826!6.92e-08!24;CL:0000115!9.01e-08!35;CL:1000413!8.61e-07!9|ontology_enrichment_celltype_v019=CL:0000623;2.69e-14;3!CL:0000860;6.16e-10;33!CL:0002057;6.16e-10;33!CL:0000473;3.70e-08;39!CL:0000234;3.70e-08;39!CL:0000784;1.37e-07;3!CL:0002144;1.37e-07;3!CL:0000625;8.85e-07;11|ontology_enrichment_celltype_v019_2=CL:0002087,1.22e-15,115;CL:0000037,4.27e-15,168;CL:0000623,9.18e-15,3;CL:0000825,9.18e-15,3;CL:0000988,5.18e-14,177;CL:0000738,7.67e-14,136;CL:0002031,2.35e-13,120;CL:0002032,2.45e-13,161;CL:0000837,2.45e-13,161;CL:0000838,1.37e-08,52;CL:0000542,2.18e-08,53;CL:0000051,2.18e-08,53;CL:0000473,9.81e-08,48;CL:0000234,9.81e-08,48;CL:0000784,1.38e-07,3;CL:0002144,1.38e-07,3;CL:0000557,2.56e-07,67;CL:0000860,2.77e-07,42;CL:0002057,2.77e-07,42;CL:0002194,3.47e-07,59;CL:0000576,3.47e-07,59;CL:0000040,3.47e-07,59;CL:0000559,3.47e-07,59;CL:0002009,6.90e-07,61;CL:0000625,6.92e-07,11|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2531!3.59e-07!51;DOID:0060083!3.59e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.90e-18!112;UBERON:0002390!1.97e-17!102;UBERON:0003061!1.97e-17!102;UBERON:0002371!9.32e-12!80;UBERON:0002405!1.04e-11!115;UBERON:0001474!2.13e-10!86;UBERON:0001986!9.02e-10!18;UBERON:0004638!9.02e-10!18;UBERON:0004852!9.02e-10!18;UBERON:0003081!1.16e-08!216;UBERON:0004765!3.24e-07!101;UBERON:0001434!3.24e-07!101;UBERON:0000487!4.85e-07!22;UBERON:0003915!8.61e-07!9;UBERON:0004700!8.61e-07!9;UBERON:0001917!8.61e-07!9|ontology_enrichment_uberon_v019=UBERON:0010523;1.37e-07;3!UBERON:0001915;1.37e-07;3!UBERON:0001982;1.37e-07;3!UBERON:0002106;5.25e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.67e-12,108;UBERON:0002390,6.51e-11,98;UBERON:0003061,6.51e-11,98;UBERON:0002405,2.65e-10,93;UBERON:0010523,1.38e-07,3;UBERON:0001915,1.38e-07,3;UBERON:0001982,1.38e-07,3;UBERON:0003081,1.53e-07,203;UBERON:0002106,2.15e-07,3;UBERON:0004854,2.15e-07,3;UBERON:0009034,2.15e-07,3;UBERON:0002095,2.15e-07,3;UBERON:0004782,2.15e-07,3;UBERON:0003281,2.15e-07,3;UBERON:0009664,2.15e-07,3;UBERON:0002296,2.15e-07,3;UBERON:0005602,2.15e-07,3;UBERON:0001179,2.15e-07,3;UBERON:0006293,2.15e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0.152826811495903,0.410502947249729,0.0787107813136792,0.786728553697808,0.767658796194425,0.464448369948228,0.919421224478927,0,0,0.619737604642413,0.284338464974843,0,0.553995408531877,0.401088894940283,0.651032612147555,0,0.32389366601898,0,0.436194716338694,1.13362783106643,0.242584061187816,0.929716147622738,0,0.309706370895104,1.1507695692886,1.2808035326455,1.41889337933151,0.344745680736619,0,1.35426486594342,0.188242339542605,0.818718450173537,0.898893937780338,0,0.641858054152187,0,0.989553900560148,1.39624560335142,2.98357325372886,0.290209238628584,0.56738522469114,0,1.50749199154046,0.521482918420201,1.52032191293582,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0.300353785683013,0.16072558669708,0.570025487482497,0,0.182664153764634,0,1.09227722252426,0.889509253863555,1.28019066769952,0.800791974072025,2.29900975981793,0.661044872784862,0,0.569212969109448,0,0,0,0.560508562981536,0.526768169550154,0.196709770113833,0.393010762749165,0,1.17030546773475,0,0,0,0.445641827540694,0.589211814949674,0.664601683750863,1.08321545506006,0.896639238079726,0.130059347559878,0.493313713811028,0.276350017785848,0.579606171470105,0.296573126324121,0,1.04535523804977,0.679856056185397,1.53288197440768,0,0.253019692019503,0.318565414324097,1.95325036156926,0.950452044448374,0.903450714466637,1.53583933385302,1.24930726552346,0.710331756132051,0.821127996921047,0.604820229674197,1.33720097891754,0.434473211648397,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,2.62339686735876,0.5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6452 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10825 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=11bp_to_ENST00000435136_5end | |||
|description=CAGE_peak_15_at_SH3BP2_5end | |||
|id=chr4:2814042..2814045,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.25e-37!172;CL:0000566!6.25e-37!172;CL:0000988!1.91e-35!182;CL:0002032!1.97e-34!165;CL:0000837!1.97e-34!165;CL:0000738!1.25e-32!140;CL:0002087!8.98e-32!119;CL:0002031!5.11e-29!124;CL:0000838!1.84e-18!52;CL:0000542!7.97e-18!53;CL:0000051!7.97e-18!53;CL:0000763!1.27e-16!112;CL:0000049!1.27e-16!112;CL:0002057!1.02e-15!42;CL:0000766!1.59e-14!76;CL:0000860!7.43e-14!45;CL:0000557!6.53e-13!71;CL:0002194!1.84e-12!63;CL:0000576!1.84e-12!63;CL:0000040!1.84e-12!63;CL:0000559!1.84e-12!63;CL:0000839!2.70e-12!70;CL:0002009!1.14e-11!65;CL:0000791!1.95e-10!18;CL:0000789!1.95e-10!18;CL:0002420!1.95e-10!18;CL:0002419!1.95e-10!18;CL:0000790!1.95e-10!18;CL:0000625!4.11e-10!11;CL:0000071!9.02e-10!18;CL:0002546!9.02e-10!18;CL:0000084!1.57e-09!25;CL:0000827!1.57e-09!25;CL:0002139!2.43e-09!24;CL:0000945!6.92e-08!24;CL:0000826!6.92e-08!24;CL:0000115!9.01e-08!35;CL:1000413!8.61e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.69e-14;3!CL:0000860;6.16e-10;33!CL:0002057;6.16e-10;33!CL:0000473;3.70e-08;39!CL:0000234;3.70e-08;39!CL:0000784;1.37e-07;3!CL:0002144;1.37e-07;3!CL:0000625;8.85e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.22e-15,115;CL:0000037,4.27e-15,168;CL:0000623,9.18e-15,3;CL:0000825,9.18e-15,3;CL:0000988,5.18e-14,177;CL:0000738,7.67e-14,136;CL:0002031,2.35e-13,120;CL:0002032,2.45e-13,161;CL:0000837,2.45e-13,161;CL:0000838,1.37e-08,52;CL:0000542,2.18e-08,53;CL:0000051,2.18e-08,53;CL:0000473,9.81e-08,48;CL:0000234,9.81e-08,48;CL:0000784,1.38e-07,3;CL:0002144,1.38e-07,3;CL:0000557,2.56e-07,67;CL:0000860,2.77e-07,42;CL:0002057,2.77e-07,42;CL:0002194,3.47e-07,59;CL:0000576,3.47e-07,59;CL:0000040,3.47e-07,59;CL:0000559,3.47e-07,59;CL:0002009,6.90e-07,61;CL:0000625,6.92e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!3.59e-07!51;DOID:0060083!3.59e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.90e-18!112;UBERON:0002390!1.97e-17!102;UBERON:0003061!1.97e-17!102;UBERON:0002371!9.32e-12!80;UBERON:0002405!1.04e-11!115;UBERON:0001474!2.13e-10!86;UBERON:0001986!9.02e-10!18;UBERON:0004638!9.02e-10!18;UBERON:0004852!9.02e-10!18;UBERON:0003081!1.16e-08!216;UBERON:0004765!3.24e-07!101;UBERON:0001434!3.24e-07!101;UBERON:0000487!4.85e-07!22;UBERON:0003915!8.61e-07!9;UBERON:0004700!8.61e-07!9;UBERON:0001917!8.61e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.37e-07;3!UBERON:0001915;1.37e-07;3!UBERON:0001982;1.37e-07;3!UBERON:0002106;5.25e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.67e-12,108;UBERON:0002390,6.51e-11,98;UBERON:0003061,6.51e-11,98;UBERON:0002405,2.65e-10,93;UBERON:0010523,1.38e-07,3;UBERON:0001915,1.38e-07,3;UBERON:0001982,1.38e-07,3;UBERON:0003081,1.53e-07,203;UBERON:0002106,2.15e-07,3;UBERON:0004854,2.15e-07,3;UBERON:0009034,2.15e-07,3;UBERON:0002095,2.15e-07,3;UBERON:0004782,2.15e-07,3;UBERON:0003281,2.15e-07,3;UBERON:0009664,2.15e-07,3;UBERON:0002296,2.15e-07,3;UBERON:0005602,2.15e-07,3;UBERON:0001179,2.15e-07,3;UBERON:0006293,2.15e-07,3 | |||
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| |||
|short_description=p15@SH3BP2 | |||
}} |
Revision as of 10:39, 13 September 2013
Short description: | p15@SH3BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_SH3BP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000435136_5end |
EntrezGene: | SH3BP2 |
HGNC: | 10825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.22e-15 | 115 |
hematopoietic stem cell | 4.27e-15 | 168 |
natural killer cell | 9.18e-15 | 3 |
pro-NK cell | 9.18e-15 | 3 |
hematopoietic cell | 5.18e-14 | 177 |
leukocyte | 7.67e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 2.35e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.45e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.45e-13 | 161 |
lymphoid lineage restricted progenitor cell | 1.37e-08 | 52 |
lymphocyte | 2.18e-08 | 53 |
common lymphoid progenitor | 2.18e-08 | 53 |
defensive cell | 9.81e-08 | 48 |
phagocyte | 9.81e-08 | 48 |
plasmacytoid dendritic cell | 1.38e-07 | 3 |
capillary endothelial cell | 1.38e-07 | 3 |
granulocyte monocyte progenitor cell | 2.56e-07 | 67 |
classical monocyte | 2.77e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.77e-07 | 42 |
monopoietic cell | 3.47e-07 | 59 |
monocyte | 3.47e-07 | 59 |
monoblast | 3.47e-07 | 59 |
promonocyte | 3.47e-07 | 59 |
macrophage dendritic cell progenitor | 6.90e-07 | 61 |
CD8-positive, alpha-beta T cell | 6.92e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.67e-12 | 108 |
hematopoietic system | 6.51e-11 | 98 |
blood island | 6.51e-11 | 98 |
immune system | 2.65e-10 | 93 |
microcirculatory vessel | 1.38e-07 | 3 |
endothelium of capillary | 1.38e-07 | 3 |
capillary | 1.38e-07 | 3 |
lateral plate mesoderm | 1.53e-07 | 203 |
spleen | 2.15e-07 | 3 |
gastrointestinal system mesentery | 2.15e-07 | 3 |
stomach region | 2.15e-07 | 3 |
mesentery | 2.15e-07 | 3 |
gastrointestinal system serosa | 2.15e-07 | 3 |
mesentery of stomach | 2.15e-07 | 3 |
gut mesentery | 2.15e-07 | 3 |
dorsal mesentery | 2.15e-07 | 3 |
dorsal mesogastrium | 2.15e-07 | 3 |
peritoneal cavity | 2.15e-07 | 3 |
spleen primordium | 2.15e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.