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FFCP PHASE1:Mm9::chr15:53733948..53734005,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=320679|HGNC=|MCL_coexpression_id=2|UniProt=Q0VE29,B7ZN34|association_with_transcript=0bp_to_NM_177225,uc007vri.1,uc011zsw.1_5end|description=CAGE_peak_1_at_Samd12_5end|id=chr15:53733948..53734005,-|ontology_enrichment_celltype=CL:0000540!3.90e-07!33;CL:0000047!3.90e-07!33;CL:0000031!3.90e-07!33;CL:0000404!3.90e-07!33|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.33e-17!52;UBERON:0005068!3.33e-17!52;UBERON:0006241!3.33e-17!52;UBERON:0007135!3.33e-17!52;UBERON:0001017!5.13e-17!73;UBERON:0005743!5.13e-17!73;UBERON:0002346!7.15e-17!71;UBERON:0003075!7.15e-17!71;UBERON:0007284!7.15e-17!71;UBERON:0000033!8.71e-17!63;UBERON:0000955!2.88e-16!50;UBERON:0006238!2.88e-16!50;UBERON:0000073!5.24e-16!75;UBERON:0001016!5.24e-16!75;UBERON:0002616!1.37e-15!49;UBERON:0004121!2.55e-15!102;UBERON:0000924!2.55e-15!102;UBERON:0006601!2.55e-15!102;UBERON:0003056!9.46e-15!49;UBERON:0003080!2.23e-14!40;UBERON:0002780!8.10e-14!39;UBERON:0001890!8.10e-14!39;UBERON:0006240!8.10e-14!39;UBERON:0002020!1.90e-13!34;UBERON:0002791!1.91e-11!29;UBERON:0003528!1.91e-11!29;UBERON:0001893!1.91e-11!29;UBERON:0002021!2.90e-08!10;UBERON:0000411!2.90e-08!10;UBERON:0001950!2.90e-08!10;UBERON:0002619!4.31e-08!17;UBERON:0000956!6.65e-08!21;UBERON:0001869!6.65e-08!21;UBERON:0000203!6.65e-08!21;UBERON:0004111!2.17e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.04e-19,64;UBERON:0003075,6.04e-19,64;UBERON:0007284,6.04e-19,64;UBERON:0000073,7.34e-19,54;UBERON:0001049,3.06e-18,52;UBERON:0005068,3.06e-18,52;UBERON:0006241,3.06e-18,52;UBERON:0007135,3.06e-18,52;UBERON:0001017,6.70e-18,73;UBERON:0001016,8.76e-17,75;UBERON:0000955,4.76e-16,47;UBERON:0006238,4.76e-16,47;UBERON:0010371,6.03e-16,73;UBERON:0004121,9.76e-16,95;UBERON:0000924,9.76e-16,95;UBERON:0006601,9.76e-16,95;UBERON:0002616,2.78e-15,46;UBERON:0003056,2.23e-14,49;UBERON:0003080,3.05e-14,40;UBERON:0002020,5.54e-14,34;UBERON:0002780,1.31e-13,39;UBERON:0001890,1.31e-13,39;UBERON:0006240,1.31e-13,39;UBERON:0003528,1.22e-11,29;UBERON:0002791,1.22e-11,29;UBERON:0001893,1.22e-11,29;UBERON:0010314,4.82e-11,92;UBERON:0002021,1.57e-09,10;UBERON:0000411,1.57e-09,10;UBERON:0001950,1.57e-09,10;UBERON:0002619,1.45e-08,17;UBERON:0004111,8.09e-08,122;UBERON:0000956,1.45e-07,21;UBERON:0001869,1.45e-07,21;UBERON:0000203,1.45e-07,21|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.866554859253824,1.32987716286794,1.42918549383658,0,0,0,0,0,0,1.51076181570693,1.72340783073175,1.28482726513177,0,0,0.219686182734472,0.972149495371417,0.139986421625363,0,0,0,0,0,0,0.515672092277442,3.64169629547276,4.23192783417626,0.633831403506179,0,0,0,0,0,0,0,1.14058573539325,0.675029691658453,0.841299845405528,2.28520787523043,2.20868540951614,2.20483438586917,1.62937300731002,1.83843757322004,1.10115880999389,6.76742891851495,5.37622866396852,3.42904348098504,4.57438218012048,4.16730696445408,4.18774498502071,7.87867654044352,4.5839474333043,9.42811473515737,11.10499110233,4.65998614563251,0.151452386666368,0.0755715601067855,4.05810284182349,0,0,0,0,0,0.702222100658759,0,0,0,0.845060518660083,0,0,0,6.71122227134764,5.32055717497707,4.54972000513305,1.1418387971906,0.776813650941515,7.86743337043571,0,0.608930956624282,0,1.05505848386836,1.17588707135705,1.63366568728578,0.247194967734374,1.44599356919912,0,0,0.441683036920787,0,1.86391761218122,19.6163133997737,21.3635640949724,0.766371165625774,0.599075622529601,0,0.508280908292259,10.4853447583376,16.9275223042892,8.92145900001337,22.7709859451882,22.5029602450691,10.5971902725376,13.1415423084884,0.81471491080253,1.36847667671102,0.758168275301024,1.68353484709179,1.04096354370163,1.14951052216736,0.900310649026746,2.10986744970001,1.97305847538851,1.7935920839879,1.12442069471675,2.06962696591213,1.29340795759705,2.45837904218165,1.75951124163949,0.219195732427575,1.11218899690239,0,0,0.796137067273973,0,0.257347907114715,0,0,0.234526059981096,0.36012412292203,0,0,0.462801338662135,0,0,0.350296027101508,0.16455984991348,0.32833492815819,0.729619285912702,1.60819986167866,1.53685080703735,2.14730270016595,11.1453672738987,4.32199371992995,0,0,1.06644125267617,0.928946687441754,0.77320476793256,0.605050573870028,0.667134131534611,0.760902504450237,0.474529061544512,0,0.502670417600539,0.994782360205754,0.58489226135736,0,1.29682829924817,0.597423819763102,0.379335801906163,0.685491075658373,4.50830942692322,1.01825663922657,1.16371492300575,0.98190147846446,2.46622494784603,3.24742325555125,2.04098346193787,3.33172342588861,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0.482443521363367,10.1614254591633,0.37898282354097,0.325929952884052,0.509235257325564,0.938760993154008,1.50755631697634,1.19021820443007,0.975668239288994,2.36452716159286,2.87904096543407,5.10255259703959,6.06294264448231,6.56202931090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|EntrezGene=320679
|HGNC=
|MCL_coexpression_id=2
|UniProt=Q0VE29,B7ZN34
|association_with_transcript=0bp_to_NM_177225,uc007vri.1,uc011zsw.1_5end
|description=CAGE_peak_1_at_Samd12_5end
|id=chr15:53733948..53734005,-
|ontology_enrichment_celltype=CL:0000540!3.90e-07!33;CL:0000047!3.90e-07!33;CL:0000031!3.90e-07!33;CL:0000404!3.90e-07!33
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.33e-17!52;UBERON:0005068!3.33e-17!52;UBERON:0006241!3.33e-17!52;UBERON:0007135!3.33e-17!52;UBERON:0001017!5.13e-17!73;UBERON:0005743!5.13e-17!73;UBERON:0002346!7.15e-17!71;UBERON:0003075!7.15e-17!71;UBERON:0007284!7.15e-17!71;UBERON:0000033!8.71e-17!63;UBERON:0000955!2.88e-16!50;UBERON:0006238!2.88e-16!50;UBERON:0000073!5.24e-16!75;UBERON:0001016!5.24e-16!75;UBERON:0002616!1.37e-15!49;UBERON:0004121!2.55e-15!102;UBERON:0000924!2.55e-15!102;UBERON:0006601!2.55e-15!102;UBERON:0003056!9.46e-15!49;UBERON:0003080!2.23e-14!40;UBERON:0002780!8.10e-14!39;UBERON:0001890!8.10e-14!39;UBERON:0006240!8.10e-14!39;UBERON:0002020!1.90e-13!34;UBERON:0002791!1.91e-11!29;UBERON:0003528!1.91e-11!29;UBERON:0001893!1.91e-11!29;UBERON:0002021!2.90e-08!10;UBERON:0000411!2.90e-08!10;UBERON:0001950!2.90e-08!10;UBERON:0002619!4.31e-08!17;UBERON:0000956!6.65e-08!21;UBERON:0001869!6.65e-08!21;UBERON:0000203!6.65e-08!21;UBERON:0004111!2.17e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.04e-19,64;UBERON:0003075,6.04e-19,64;UBERON:0007284,6.04e-19,64;UBERON:0000073,7.34e-19,54;UBERON:0001049,3.06e-18,52;UBERON:0005068,3.06e-18,52;UBERON:0006241,3.06e-18,52;UBERON:0007135,3.06e-18,52;UBERON:0001017,6.70e-18,73;UBERON:0001016,8.76e-17,75;UBERON:0000955,4.76e-16,47;UBERON:0006238,4.76e-16,47;UBERON:0010371,6.03e-16,73;UBERON:0004121,9.76e-16,95;UBERON:0000924,9.76e-16,95;UBERON:0006601,9.76e-16,95;UBERON:0002616,2.78e-15,46;UBERON:0003056,2.23e-14,49;UBERON:0003080,3.05e-14,40;UBERON:0002020,5.54e-14,34;UBERON:0002780,1.31e-13,39;UBERON:0001890,1.31e-13,39;UBERON:0006240,1.31e-13,39;UBERON:0003528,1.22e-11,29;UBERON:0002791,1.22e-11,29;UBERON:0001893,1.22e-11,29;UBERON:0010314,4.82e-11,92;UBERON:0002021,1.57e-09,10;UBERON:0000411,1.57e-09,10;UBERON:0001950,1.57e-09,10;UBERON:0002619,1.45e-08,17;UBERON:0004111,8.09e-08,122;UBERON:0000956,1.45e-07,21;UBERON:0001869,1.45e-07,21;UBERON:0000203,1.45e-07,21
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.866554859253824,1.32987716286794,1.42918549383658,0,0,0,0,0,0,1.51076181570693,1.72340783073175,1.28482726513177,0,0,0.219686182734472,0.972149495371417,0.139986421625363,0,0,0,0,0,0,0.515672092277442,3.64169629547276,4.23192783417626,0.633831403506179,0,0,0,0,0,0,0,1.14058573539325,0.675029691658453,0.841299845405528,2.28520787523043,2.20868540951614,2.20483438586917,1.62937300731002,1.83843757322004,1.10115880999389,6.76742891851495,5.37622866396852,3.42904348098504,4.57438218012048,4.16730696445408,4.18774498502071,7.87867654044352,4.5839474333043,9.42811473515737,11.10499110233,4.65998614563251,0.151452386666368,0.0755715601067855,4.05810284182349,0,0,0,0,0,0.702222100658759,0,0,0,0.845060518660083,0,0,0,6.71122227134764,5.32055717497707,4.54972000513305,1.1418387971906,0.776813650941515,7.86743337043571,0,0.608930956624282,0,1.05505848386836,1.17588707135705,1.63366568728578,0.247194967734374,1.44599356919912,0,0,0.441683036920787,0,1.86391761218122,19.6163133997737,21.3635640949724,0.766371165625774,0.599075622529601,0,0.508280908292259,10.4853447583376,16.9275223042892,8.92145900001337,22.7709859451882,22.5029602450691,10.5971902725376,13.1415423084884,0.81471491080253,1.36847667671102,0.758168275301024,1.68353484709179,1.04096354370163,1.14951052216736,0.900310649026746,2.10986744970001,1.97305847538851,1.7935920839879,1.12442069471675,2.06962696591213,1.29340795759705,2.45837904218165,1.75951124163949,0.219195732427575,1.11218899690239,0,0,0.796137067273973,0,0.257347907114715,0,0,0.234526059981096,0.36012412292203,0,0,0.462801338662135,0,0,0.350296027101508,0.16455984991348,0.32833492815819,0.729619285912702,1.60819986167866,1.53685080703735,2.14730270016595,11.1453672738987,4.32199371992995,0,0,1.06644125267617,0.928946687441754,0.77320476793256,0.605050573870028,0.667134131534611,0.760902504450237,0.474529061544512,0,0.502670417600539,0.994782360205754,0.58489226135736,0,1.29682829924817,0.597423819763102,0.379335801906163,0.685491075658373,4.50830942692322,1.01825663922657,1.16371492300575,0.98190147846446,2.46622494784603,3.24742325555125,2.04098346193787,3.33172342588861,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0.482443521363367,10.1614254591633,0.37898282354097,0.325929952884052,0.509235257325564,0.938760993154008,1.50755631697634,1.19021820443007,0.975668239288994,2.36452716159286,2.87904096543407,5.10255259703959,6.06294264448231,6.56202931090403,9.83613598354279,0,0,0,3.03530420935206,6.26147300952389,4.33683240391152,0,0.504941854408746,2.52406575533005,1.56175497718655,1.07711698866399,2.15071918157297,2.22798674082394,0.849229592366497,1.21443210502468,1.46127928955656,1.58115111178609,25.7057053137446,4.5420827266646,0.890328018336276,1.46598263418218,10.8880281161873,0,0.971122544619926,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,0,1.09060118843252,0.712994756769443,1.58018378967908,4.21674434299995,2.06271086496374,12.5962654128902,0.900305470156551,0.646793418913773,1.28602221018955,4.96552654198366,4.63758925765383,3.45552943264454,1.522324745573,0.938686832254841,3.1774810629573,14.9959310677374,1.48397627647332,0.161464426695906,0.663442174209714,0.477489376012546,1.14898629821543,0.582961673259701,4.45020724825223,0.170870880797853,0.206386867963223,0,0.188368457004691,0.136694227721025,0.228778173206523,6.11922347977879,2.51912614182584,5.52799895217695,0.954670618015114,1.58167996790568,1.01659733563424,2.37611749807963,1.04544148007234,1.52853794622324,0.674321731924103,0.909188012978695,0.26175594198403,4.01806417204558,1.24267862617385,0,0.149516546043979,0,0.388902376688095,0.516639293910924,0.337912250981556,0.469428954583016,0.911430693907651,0.314578033277133,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0.25984164595559,0.537080087002444,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0.192423683280659,0.350630706544707,2.72076460338254,0.221985953374065,0.717710852875806,1.00730769818447,4.63655025677257,3.94133198447482,19.9635270451319,18.2213122217206,12.5393026008841,23.7195773899168,35.9053684475598,24.0616115644547,20.9660882459299,23.9778881919725,29.4603619981983,29.0259675099676,25.6683085837806,24.469690085147,25.3702552758392,0.62272408550506,0,1.53660245178721,1.70174701947806,0.419226325255965,0.551530525350042,2.889207461421,0.824140228955577,0.962757628775446,2.27427490587418,2.28131369901216,3.2066478035633,2.52832070168682,2.94515701062399,1.89537047553524,1.90517476513229,1.27472758539341,1.92909220463705,2.88460130562315,2.64958056241915,2.74295401908332,2.12970967391205,1.90748951957857,1.45346416632329,2.1645157495526,2.11536519729191,1.64635175585495,2.36762740294059,2.30866993537965,0.561142271657738,2.49133538060766,2.46261205938909,2.04615521584845,2.01417893541756,1.15743966588685,1.24905288968973,1.63752125911786,1.71896843238639,0.57386499620653,0.661774257358546,0.927471342481686
|short_description=p1@Samd12
}}

Revision as of 10:34, 13 September 2013

Short description:p1@Samd12
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Samd12_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_NM_177225, uc007vri.1, uc011zsw.1_5end
EntrezGene:Samd12
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Samd12

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D77.87
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B219.62
cerebellum, neonate N30.CNhs11135.1395-42I221.36
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A410.49
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F18.92
cortex, adult.CNhs10473.12-14D522.77
cortex, neonate N30.CNhs11107.1392-42F222.50
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B213.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E811.15
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D52.47
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B110.16
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E65.10
lung, neonate N20.CNhs11109.822-18A46.06
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H29.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I925.71
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G610.89
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G812.60
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F815.00
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.53
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E519.96
vagina, adult.CNhs10502.89-27D518.22
vesicular gland, adult.CNhs10491.51-27F812.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.47
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.37
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm6.04e-1964
neural plate6.04e-1964
presumptive neural plate6.04e-1964
regional part of nervous system7.34e-1954
neural tube3.06e-1852
neural rod3.06e-1852
future spinal cord3.06e-1852
neural keel3.06e-1852
central nervous system6.70e-1873
nervous system8.76e-1775
brain4.76e-1647
future brain4.76e-1647
ecto-epithelium6.03e-1673
ectoderm-derived structure9.76e-1695
ectoderm9.76e-1695
presumptive ectoderm9.76e-1695
regional part of brain2.78e-1546
pre-chordal neural plate2.23e-1449
anterior neural tube3.05e-1440
gray matter5.54e-1434
regional part of forebrain1.31e-1339
forebrain1.31e-1339
future forebrain1.31e-1339
brain grey matter1.22e-1129
regional part of telencephalon1.22e-1129
telencephalon1.22e-1129
structure with developmental contribution from neural crest4.82e-1192
occipital lobe1.57e-0910
visual cortex1.57e-0910
neocortex1.57e-0910
regional part of cerebral cortex1.45e-0817
anatomical conduit8.09e-08122
cerebral cortex1.45e-0721
cerebral hemisphere1.45e-0721
pallium1.45e-0721







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