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FFCP PHASE1:Mm9::chr15:44288991..44289032,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=192190|HGNC=|MCL_coexpression_id=15|UniProt=F8WH29,E9PUU8,Q80ZA4|association_with_transcript=-66bp_to_ENSMUST00000038336,ENSMUST00000166957,NM_138674,uc007vpx.1,uc007vpy.1_5end|description=CAGE_peak_1_at_Pkhd1l1_5end|id=chr15:44288991..44289032,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!8.91e-14!193;UBERON:0004120!8.91e-14!193;UBERON:0006603!8.91e-14!193;UBERON:0004872!9.89e-13!33;UBERON:0001048!1.56e-12!147;UBERON:0003914!2.27e-11!47;UBERON:0004535!6.01e-10!23;UBERON:0001009!6.01e-10!23;UBERON:0003104!7.00e-10!131;UBERON:0009142!7.00e-10!131;UBERON:0000466!5.69e-09!79;UBERON:0001041!2.94e-08!92;UBERON:0007100!4.07e-08!18;UBERON:0000948!4.07e-08!18;UBERON:0005498!4.07e-08!18;UBERON:0004140!4.07e-08!18;UBERON:0009881!4.07e-08!18;UBERON:0004141!4.07e-08!18;UBERON:0003084!4.07e-08!18;UBERON:0007005!4.07e-08!18;UBERON:0004139!4.07e-08!18;UBERON:0004291!4.07e-08!18;UBERON:0000077!4.46e-08!97;UBERON:0002100!1.01e-07!98;UBERON:0002075!3.01e-07!19;UBERON:0005177!5.49e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0004872,8.76e-14,33;UBERON:0003914,3.30e-12,47;UBERON:0004535,5.41e-11,23;UBERON:0001009,5.41e-11,23;UBERON:0001048,1.35e-09,134;UBERON:0007100,5.61e-09,18;UBERON:0000948,5.61e-09,18;UBERON:0005498,5.61e-09,18;UBERON:0004140,5.61e-09,18;UBERON:0009881,5.61e-09,18;UBERON:0004141,5.61e-09,18;UBERON:0003084,5.61e-09,18;UBERON:0007005,5.61e-09,18;UBERON:0004139,5.61e-09,18;UBERON:0004291,5.61e-09,18;UBERON:0002100,2.23e-08,90;UBERON:0005177,4.22e-08,79;UBERON:0000926,5.58e-08,120;UBERON:0004120,5.58e-08,120;UBERON:0006603,5.58e-08,120;UBERON:0002075,2.32e-07,19;UBERON:0003081,5.29e-07,87|phase1_expression=25.623815536767,1.74487703819681,2.27499619694768,0,0,0,0,0.129123323441576,0,0,0,0,0,0,49.9664642723494,66.8168382386426,95.1404154254279,0.315462165358238,0.137114433605739,2.54633791078818,3.31668831589172,0,0,0.159992422793407,0,0,0.430761996159075,1.07735616342945,0.190023419456374,0,0.221730510655305,6.98533740805594,4.92051830067656,0,0,0,0,1.25559489221072,0,0,0.588231488031014,0.683045484958446,0.485510353031154,11.8343008897043,12.3679856087808,1.83546752161682,0,0,0,0,0,0,0,0,0,0,6.01720223871389,8.25075347643908,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.294628585473668,0.427115042397309,0.186399445825301,0,0,14.7830889237856,0.860423876981386,0,0,0,0,6.31999890592883,0,0,0,10.8449433228044,0,0,0,0,0,0,1.94112595522402,3.10725460376606,1.48442139064825,1.56136794089522,3.34912026143355,2.99800146432876,2.86373017049983,4.46837087115678,1.63366568728578,0,55.0923549864863,49.538190909193,5.66183974815932,25.838457659866,38.3051449976825,5.59175283654366,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,5.6011650117674,29.484452034592,0.252722758433675,0.631325567659422,1.17108398666433,0,0.180062129805349,1.05493372485001,0.0680364991513279,0.12811372028485,0.0937017245597288,1.29351685369508,1.72454394346274,0.945530400839096,0,0,0,0.348252166522167,0.411564272815887,1.59227413454795,0,0,0,20.7125772535502,18.9966108584688,12.064158117888,12.0739815148457,11.215561209602,15.4267112887378,14.1845706297749,12.3405764643825,11.4430035519826,13.3293478429919,12.3125598059321,15.727349051896,16.0819986167866,26.3460138349261,17.8494536951294,0,0,0.660837565967596,0.264450566663544,2.13288250535234,1.85789337488351,1.15980715189884,0.403367049246685,0.22237804384487,1.71203063501303,1.42358718463353,1.64698954724011,1.25667604400135,1.59165177632921,0.974820435595601,0,1.72910439899755,1.39398891278057,0,2.05647322697512,0,0,0,0.140271639780637,0.252946148497029,0.442830443938806,0.470996183524124,0.246794327843601,1.48226313543574,57.2278712606203,54.0537236561308,73.9796349746169,83.1726497692862,68.253136209934,50.925170356284,38.5512824184086,19.1319567594542,20.0429831627299,5.75072826109418,3.34926852901653,1.87222603868736,1.26289438973556,1.07638448113147,0.482443521363367,16.9972934953276,5.49525094134406,2.11854469374634,1.86719594352707,2.81628297946203,3.35012514883632,4.52282917683426,2.73187107000918,6.46304090835383,4.20782910332672,3.6674596791222,11.9620219742489,12.4333186943445,15.6220983268033,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.234423373184406,0,2.27223834483936,0,0,0,0,0,0,0,0,0,0.963963949265421,22.8523537185312,3.38324646967785,9.28455668315384,15.8371318053634,23.8941249011933,1.94224508923985,1.209294227859,2.45186603682668,0.885905678642318,7.99331384654211,7.75284879504663,7.63420831902762,9.62542921638748,12.6414703174326,5.27093042874994,12.3762651897824,0,1.62054984628179,0.388076051348264,0,0.177340233642274,0,0.164549020602121,0,0.704015124191131,0,1.32317038832977,2.80306630000516,0.645857706783622,0.72375509913787,0.716234064018819,0.984845398470368,0.874442509889552,1.11255181206306,69.544448484726,3.92135049130123,31.2978751254813,102.095703696543,114.823151285661,68.4046737887503,0.679913719975421,0.139951452323658,0.552799895217695,0.954670618015114,0.632671987162271,2.64315307264903,1.29606408986162,0.627264888043406,0.87345025498471,3.77620169877498,2.23164330458407,3.40282724579238,2.33306951925227,0,0,1.94371509857172,0.992750942742586,0.777804753376191,0.774958940866387,1.01373675294467,1.76035857968631,1.17183946359555,0.314578033277133,0.966336483304024,0.288030006257865,5.37218905067903,5.6763060281246,16.1256202748779,17.6692319249801,10.025494957379,7.9472541912506,6.37035882455835,4.72606486958647,4.64445669761479,4.49620159264499,5.34378781225255,2.92373642219257,2.50150788264857,1.8700304349051,3.40095575422817,0,0,0,11.9777548299958,10.1348536743638,7.8755198434924,1.07184189539533,2.00628841614145,0.564751842617067,0,0,0,0,0,0,0,0,0,1.03787347584177,10.3746467084268,6.31714341290296,13.6139761558245,5.03071590307158,3.67687016900028,5.33392146723877,5.56294654545014,5.77654577265267,5.30664144703975,8.36481689637791,7.73367999682912,4.58843386602424,5.76226371643823,5.28406314391642,7.1444053692461,3.94006708212509,3.8581844092741,5.35711671044299,6.18235464564469,7.54312355247914,5.85670160325814,6.67621331852499,4.94177816549917,6.02300034658116,5.4153349050673,5.48783918618318,7.62902163169744,7.33342214767654,5.05028044491965,4.86403574309114,4.62971067165148,4.09231043169689,7.2820315357404,5.98010494041538,0.499621155875892,4.21076895201735,4.94203424311086,1.53030665655075,7.72069966918304,7.88350641109433|short_description=p1@Pkhd1l1}}
|EntrezGene=192190
|HGNC=
|MCL_coexpression_id=15
|UniProt=F8WH29,E9PUU8,Q80ZA4
|association_with_transcript=-66bp_to_ENSMUST00000038336,ENSMUST00000166957,NM_138674,uc007vpx.1,uc007vpy.1_5end
|description=CAGE_peak_1_at_Pkhd1l1_5end
|id=chr15:44288991..44289032,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!8.91e-14!193;UBERON:0004120!8.91e-14!193;UBERON:0006603!8.91e-14!193;UBERON:0004872!9.89e-13!33;UBERON:0001048!1.56e-12!147;UBERON:0003914!2.27e-11!47;UBERON:0004535!6.01e-10!23;UBERON:0001009!6.01e-10!23;UBERON:0003104!7.00e-10!131;UBERON:0009142!7.00e-10!131;UBERON:0000466!5.69e-09!79;UBERON:0001041!2.94e-08!92;UBERON:0007100!4.07e-08!18;UBERON:0000948!4.07e-08!18;UBERON:0005498!4.07e-08!18;UBERON:0004140!4.07e-08!18;UBERON:0009881!4.07e-08!18;UBERON:0004141!4.07e-08!18;UBERON:0003084!4.07e-08!18;UBERON:0007005!4.07e-08!18;UBERON:0004139!4.07e-08!18;UBERON:0004291!4.07e-08!18;UBERON:0000077!4.46e-08!97;UBERON:0002100!1.01e-07!98;UBERON:0002075!3.01e-07!19;UBERON:0005177!5.49e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0004872,8.76e-14,33;UBERON:0003914,3.30e-12,47;UBERON:0004535,5.41e-11,23;UBERON:0001009,5.41e-11,23;UBERON:0001048,1.35e-09,134;UBERON:0007100,5.61e-09,18;UBERON:0000948,5.61e-09,18;UBERON:0005498,5.61e-09,18;UBERON:0004140,5.61e-09,18;UBERON:0009881,5.61e-09,18;UBERON:0004141,5.61e-09,18;UBERON:0003084,5.61e-09,18;UBERON:0007005,5.61e-09,18;UBERON:0004139,5.61e-09,18;UBERON:0004291,5.61e-09,18;UBERON:0002100,2.23e-08,90;UBERON:0005177,4.22e-08,79;UBERON:0000926,5.58e-08,120;UBERON:0004120,5.58e-08,120;UBERON:0006603,5.58e-08,120;UBERON:0002075,2.32e-07,19;UBERON:0003081,5.29e-07,87
|phase1_expression=25.623815536767,1.74487703819681,2.27499619694768,0,0,0,0,0.129123323441576,0,0,0,0,0,0,49.9664642723494,66.8168382386426,95.1404154254279,0.315462165358238,0.137114433605739,2.54633791078818,3.31668831589172,0,0,0.159992422793407,0,0,0.430761996159075,1.07735616342945,0.190023419456374,0,0.221730510655305,6.98533740805594,4.92051830067656,0,0,0,0,1.25559489221072,0,0,0.588231488031014,0.683045484958446,0.485510353031154,11.8343008897043,12.3679856087808,1.83546752161682,0,0,0,0,0,0,0,0,0,0,6.01720223871389,8.25075347643908,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.294628585473668,0.427115042397309,0.186399445825301,0,0,14.7830889237856,0.860423876981386,0,0,0,0,6.31999890592883,0,0,0,10.8449433228044,0,0,0,0,0,0,1.94112595522402,3.10725460376606,1.48442139064825,1.56136794089522,3.34912026143355,2.99800146432876,2.86373017049983,4.46837087115678,1.63366568728578,0,55.0923549864863,49.538190909193,5.66183974815932,25.838457659866,38.3051449976825,5.59175283654366,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,5.6011650117674,29.484452034592,0.252722758433675,0.631325567659422,1.17108398666433,0,0.180062129805349,1.05493372485001,0.0680364991513279,0.12811372028485,0.0937017245597288,1.29351685369508,1.72454394346274,0.945530400839096,0,0,0,0.348252166522167,0.411564272815887,1.59227413454795,0,0,0,20.7125772535502,18.9966108584688,12.064158117888,12.0739815148457,11.215561209602,15.4267112887378,14.1845706297749,12.3405764643825,11.4430035519826,13.3293478429919,12.3125598059321,15.727349051896,16.0819986167866,26.3460138349261,17.8494536951294,0,0,0.660837565967596,0.264450566663544,2.13288250535234,1.85789337488351,1.15980715189884,0.403367049246685,0.22237804384487,1.71203063501303,1.42358718463353,1.64698954724011,1.25667604400135,1.59165177632921,0.974820435595601,0,1.72910439899755,1.39398891278057,0,2.05647322697512,0,0,0,0.140271639780637,0.252946148497029,0.442830443938806,0.470996183524124,0.246794327843601,1.48226313543574,57.2278712606203,54.0537236561308,73.9796349746169,83.1726497692862,68.253136209934,50.925170356284,38.5512824184086,19.1319567594542,20.0429831627299,5.75072826109418,3.34926852901653,1.87222603868736,1.26289438973556,1.07638448113147,0.482443521363367,16.9972934953276,5.49525094134406,2.11854469374634,1.86719594352707,2.81628297946203,3.35012514883632,4.52282917683426,2.73187107000918,6.46304090835383,4.20782910332672,3.6674596791222,11.9620219742489,12.4333186943445,15.6220983268033,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.234423373184406,0,2.27223834483936,0,0,0,0,0,0,0,0,0,0.963963949265421,22.8523537185312,3.38324646967785,9.28455668315384,15.8371318053634,23.8941249011933,1.94224508923985,1.209294227859,2.45186603682668,0.885905678642318,7.99331384654211,7.75284879504663,7.63420831902762,9.62542921638748,12.6414703174326,5.27093042874994,12.3762651897824,0,1.62054984628179,0.388076051348264,0,0.177340233642274,0,0.164549020602121,0,0.704015124191131,0,1.32317038832977,2.80306630000516,0.645857706783622,0.72375509913787,0.716234064018819,0.984845398470368,0.874442509889552,1.11255181206306,69.544448484726,3.92135049130123,31.2978751254813,102.095703696543,114.823151285661,68.4046737887503,0.679913719975421,0.139951452323658,0.552799895217695,0.954670618015114,0.632671987162271,2.64315307264903,1.29606408986162,0.627264888043406,0.87345025498471,3.77620169877498,2.23164330458407,3.40282724579238,2.33306951925227,0,0,1.94371509857172,0.992750942742586,0.777804753376191,0.774958940866387,1.01373675294467,1.76035857968631,1.17183946359555,0.314578033277133,0.966336483304024,0.288030006257865,5.37218905067903,5.6763060281246,16.1256202748779,17.6692319249801,10.025494957379,7.9472541912506,6.37035882455835,4.72606486958647,4.64445669761479,4.49620159264499,5.34378781225255,2.92373642219257,2.50150788264857,1.8700304349051,3.40095575422817,0,0,0,11.9777548299958,10.1348536743638,7.8755198434924,1.07184189539533,2.00628841614145,0.564751842617067,0,0,0,0,0,0,0,0,0,1.03787347584177,10.3746467084268,6.31714341290296,13.6139761558245,5.03071590307158,3.67687016900028,5.33392146723877,5.56294654545014,5.77654577265267,5.30664144703975,8.36481689637791,7.73367999682912,4.58843386602424,5.76226371643823,5.28406314391642,7.1444053692461,3.94006708212509,3.8581844092741,5.35711671044299,6.18235464564469,7.54312355247914,5.85670160325814,6.67621331852499,4.94177816549917,6.02300034658116,5.4153349050673,5.48783918618318,7.62902163169744,7.33342214767654,5.05028044491965,4.86403574309114,4.62971067165148,4.09231043169689,7.2820315357404,5.98010494041538,0.499621155875892,4.21076895201735,4.94203424311086,1.53030665655075,7.72069966918304,7.88350641109433
|short_description=p1@Pkhd1l1
}}

Revision as of 10:31, 13 September 2013

Short description:p1@Pkhd1l1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pkhd1l1_5end
Coexpression cluster:MCL_coexpression_mm9:15
Association with transcript: -66bp_to_ENSMUST00000038336, ENSMUST00000166957, NM_138674, uc007vpx.1, uc007vpy.1_5end
EntrezGene:Pkhd1l1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pkhd1l1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G725.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A149.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A366.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A595.14
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.37
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.84
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H155.09
bone (os femoris), adult.CNhs10483.56-12G249.54
bone (os femoris), neonate N02.CNhs11227.1985-43F55.66
bone (os femoris), neonate N16.CNhs11225.1525-43A625.84
bone (os femoris), neonate N20.CNhs11195.1350-25C338.31
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.60
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A229.48
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E920.71
heart, embryo E12.CNhs11015.353-12F519.00
heart, embryo E13.CNhs11013.376-3I912.06
heart, embryo E14.CNhs10597.403-26D412.07
heart, embryo E15.CNhs11017.431-16C811.22
heart, embryo E16.CNhs11021.457-17C615.43
heart, embryo E17.CNhs11025.479-18E514.18
heart, embryo E18.CNhs11030.1283-20G312.34
heart, neonate N00.CNhs11213.639-21E311.44
heart, neonate N03.CNhs11221.1349-25I213.33
heart, neonate N10.CNhs11118.749-24G112.31
heart, neonate N16.CNhs11209.782-15G115.73
heart, neonate N20.CNhs11127.821-26I616.08
heart, neonate N25.CNhs11196.1351-25D326.35
heart, neonate N30.CNhs11202.1390-42D217.85
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F857.23
liver, embryo E13.CNhs10524.378-3H654.05
liver, embryo E14.CNhs10594.409-16E173.98
liver, embryo E15.CNhs10520.433-16D783.17
liver, embryo E16.CNhs10523.462-17F568.25
liver, embryo E17.CNhs10510.481-18A350.93
liver, embryo E18.CNhs10579.499-43G438.55
liver, neonate N00.CNhs11117.641-24F419.13
liver, neonate N03.CNhs11123.1345-25G220.04
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B117.00
lung, embryo E12.CNhs10522.354-16G25.50
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E56.46
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A411.96
lung, neonate N25.CNhs11119.1359-25C712.43
lung, neonate N30.CNhs11133.1394-42H215.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I722.85
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I49.28
oviduct, adult pregnant day01.CNhs10500.988-6G615.84
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I77.99
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G269.54
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F231.30
spleen, neonate N10.CNhs11116.752-24D1102.10
spleen, neonate N20.CNhs11112.824-19H1114.82
spleen, neonate N25.CNhs11099.1354-25G368.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A92.23
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I216.13
thymus, embryo E16.CNhs11002.456-26C517.67
thymus, embryo E17.CNhs10581.478-18C110.03
thymus, embryo E18.CNhs10595.1273-19G47.95
thymus, neonate N02.CNhs11181.1541-43F86.37
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C44.64
thymus, neonate N07.CNhs11211.713-19D34.50
thymus, neonate N10.CNhs11194.748-24E45.34
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E411.98
uterus, adult pregnant day19.CNhs10497.590-15F510.13
uterus, adult.CNhs10509.92-27E57.88
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H26.32
whole body, embryo E14.5.CNhs10578.420-27D213.61
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.02
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.28
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D17.72
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
splanchnic layer of lateral plate mesoderm8.76e-1433
epithelial tube3.30e-1247
cardiovascular system5.41e-1123
circulatory system5.41e-1123
primordium1.35e-09134
primary circulatory organ5.61e-0918
heart5.61e-0918
primitive heart tube5.61e-0918
primary heart field5.61e-0918
anterior lateral plate mesoderm5.61e-0918
heart tube5.61e-0918
heart primordium5.61e-0918
cardiac mesoderm5.61e-0918
cardiogenic plate5.61e-0918
heart rudiment5.61e-0918
trunk2.23e-0890
trunk region element4.22e-0879
mesoderm5.58e-08120
mesoderm-derived structure5.58e-08120
presumptive mesoderm5.58e-08120
viscus2.32e-0719
lateral plate mesoderm5.29e-0787







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