FFCP PHASE1:Mm9::chr15:35867911..35867933,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12864,621837|HGNC=|MCL_coexpression_id=282|UniProt=|association_with_transcript=28bp_to_ENSMUST00000127999_5end|description=CAGE_peak_1_at_Cox6c_5end,CAGE_peak_1_at_Gm6265_5end|id=chr15:35867911..35867933,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!6.84e-09!23;UBERON:0001009!6.84e-09!23;UBERON:0003914!3.90e-08!47;UBERON:0007100!8.28e-08!18;UBERON:0000948!8.28e-08!18;UBERON:0005498!8.28e-08!18;UBERON:0004140!8.28e-08!18;UBERON:0009881!8.28e-08!18;UBERON:0004141!8.28e-08!18;UBERON:0003084!8.28e-08!18;UBERON:0007005!8.28e-08!18;UBERON:0004139!8.28e-08!18;UBERON:0004291!8.28e-08!18;UBERON:0003103!4.58e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0004535,6.84e-09,23;UBERON:0001009,6.84e-09,23;UBERON:0003914,3.90e-08,47;UBERON:0007100,8.28e-08,18;UBERON:0000948,8.28e-08,18;UBERON:0005498,8.28e-08,18;UBERON:0004140,8.28e-08,18;UBERON:0009881,8.28e-08,18;UBERON:0004141,8.28e-08,18;UBERON:0003084,8.28e-08,18;UBERON:0007005,8.28e-08,18;UBERON:0004139,8.28e-08,18;UBERON:0004291,8.28e-08,18;UBERON:0003103,4.58e-07,43|phase1_expression=278.819142809446,563.944258745207,460.45923026221,205.070735266031,205.367249278002,264.074094717403,238.752118688627,110.400441542548,72.64698063026,78.8797453705118,155.294697180533,140.797860626769,101.522032849205,101.14540559878,119.919514253639,160.562887040132,177.688717044549,120.506547166847,117.095726299301,119.253492155246,279.877467887171,154.198847214975,202.691036371814,478.537336575079,450.101009453788,928.533085973988,806.386456809788,655.032547365103,631.44782285353,674.684657367335,632.153685878274,29.8464416526027,65.1968674839644,63.3926724061755,453.20819138975,591.130398894799,502.46078576169,287.949761946993,418.014409320233,462.271465928864,274.704104910484,313.517877595927,381.611137482487,367.115121216783,393.545246994156,602.951080851124,531.243722812319,498.623532642081,413.010023540807,424.634899578235,270.733739423451,337.818526257683,130.702650118977,85.5927327573386,83.0151683881886,169.791227783725,178.796866521784,355.813743671435,283.243045203437,188.320788620844,268.74451508662,428.299488535383,299.692346289454,349.611040163823,247.216590641744,306.216929541769,353.228530301199,640.491914971031,181.353131927527,165.922298209648,185.71694087327,433.903845309378,363.328749865404,218.891058197123,254.086343669345,207.743445773865,159.668027449114,359.184482033633,319.962408772755,228.954595499617,265.131191159783,215.137222039942,509.788156176522,379.301999161352,328.821829215695,139.948578099992,269.651963433501,203.361795395403,158.116291679688,189.760187428138,166.672081003465,569.600606561678,350.865208193199,357.823216055873,483.433654581066,466.844016355424,451.669255143714,321.431588382217,493.593408745451,439.554430690863,249.856226683831,202.755834314622,40.7688383530633,21.3320010945999,176.223707383128,197.620695070577,212.320266906209,413.459828462716,90.6282592765101,170.856902063613,165.158031081361,158.322048722313,184.492397804847,256.982102142221,190.140939438435,351.740789131762,82.0687292878121,652.143099708802,145.076130519779,239.091404222271,270.530860113982,266.681389224372,342.960840641345,234.810199203261,210.493940347522,329.539601219083,303.611525498002,551.910512513935,313.355179962178,281.007239523447,300.120395449019,214.49197905666,327.658843562441,338.311550048027,332.668659339856,325.61821497699,192.170879585547,236.746465071007,436.452203814956,174.245856674,123.744541257531,173.346186742839,178.621632766906,163.966841805258,110.491274621756,132.08524561368,166.039455919839,177.470512326965,151.544299031788,127.45749803311,139.529241462011,201.879269565796,122.340789659263,137.907857942778,140.754981303033,189.878690544842,318.804787040209,410.469911847971,199.482776575706,288.319075369419,294.095679216295,449.795029529615,325.050521958494,487.975294733561,615.217246194865,720.390160836764,685.975087378826,969.85293370171,878.420478838159,966.453861033634,1004.19934384451,1166.09109970445,1095.55507530234,1156.1882976206,354.548853279119,196.753618869192,444.082844330224,308.613811296356,153.354252134833,137.251873069519,140.723267763726,180.103387488645,236.610238650942,250.52714959024,307.494831880844,280.317620940267,286.019467614707,258.444457181455,226.548269232418,274.139919639538,393.587388821818,363.43282368922,256.431002088566,178.341928183787,163.426216725967,202.022117222552,207.335208782192,219.244572977136,327.37555269228,559.147240546733,651.701719269547,672.761337701656,476.695824356135,144.487861550137,142.898389447299,150.657615297852,155.593713104982,143.259232892936,191.733266391409,199.085727115961,184.023482389665,358.851767036822,125.078339678798,278.361428856041,356.347022696828,382.404421211927,499.442399245004,501.258818696539,152.421381887449,175.469047299469,149.764813350222,167.029164402785,161.232200574201,147.908025321123,179.484905228054,152.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| ||
|EntrezGene=12864,621837 | |||
|HGNC= | |||
|MCL_coexpression_id=282 | |||
|UniProt= | |||
|association_with_transcript=28bp_to_ENSMUST00000127999_5end | |||
|description=CAGE_peak_1_at_Cox6c_5end,CAGE_peak_1_at_Gm6265_5end | |||
|id=chr15:35867911..35867933,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!6.84e-09!23;UBERON:0001009!6.84e-09!23;UBERON:0003914!3.90e-08!47;UBERON:0007100!8.28e-08!18;UBERON:0000948!8.28e-08!18;UBERON:0005498!8.28e-08!18;UBERON:0004140!8.28e-08!18;UBERON:0009881!8.28e-08!18;UBERON:0004141!8.28e-08!18;UBERON:0003084!8.28e-08!18;UBERON:0007005!8.28e-08!18;UBERON:0004139!8.28e-08!18;UBERON:0004291!8.28e-08!18;UBERON:0003103!4.58e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,6.84e-09,23;UBERON:0001009,6.84e-09,23;UBERON:0003914,3.90e-08,47;UBERON:0007100,8.28e-08,18;UBERON:0000948,8.28e-08,18;UBERON:0005498,8.28e-08,18;UBERON:0004140,8.28e-08,18;UBERON:0009881,8.28e-08,18;UBERON:0004141,8.28e-08,18;UBERON:0003084,8.28e-08,18;UBERON:0007005,8.28e-08,18;UBERON:0004139,8.28e-08,18;UBERON:0004291,8.28e-08,18;UBERON:0003103,4.58e-07,43 | |||
|phase1_expression=278.819142809446,563.944258745207,460.45923026221,205.070735266031,205.367249278002,264.074094717403,238.752118688627,110.400441542548,72.64698063026,78.8797453705118,155.294697180533,140.797860626769,101.522032849205,101.14540559878,119.919514253639,160.562887040132,177.688717044549,120.506547166847,117.095726299301,119.253492155246,279.877467887171,154.198847214975,202.691036371814,478.537336575079,450.101009453788,928.533085973988,806.386456809788,655.032547365103,631.44782285353,674.684657367335,632.153685878274,29.8464416526027,65.1968674839644,63.3926724061755,453.20819138975,591.130398894799,502.46078576169,287.949761946993,418.014409320233,462.271465928864,274.704104910484,313.517877595927,381.611137482487,367.115121216783,393.545246994156,602.951080851124,531.243722812319,498.623532642081,413.010023540807,424.634899578235,270.733739423451,337.818526257683,130.702650118977,85.5927327573386,83.0151683881886,169.791227783725,178.796866521784,355.813743671435,283.243045203437,188.320788620844,268.74451508662,428.299488535383,299.692346289454,349.611040163823,247.216590641744,306.216929541769,353.228530301199,640.491914971031,181.353131927527,165.922298209648,185.71694087327,433.903845309378,363.328749865404,218.891058197123,254.086343669345,207.743445773865,159.668027449114,359.184482033633,319.962408772755,228.954595499617,265.131191159783,215.137222039942,509.788156176522,379.301999161352,328.821829215695,139.948578099992,269.651963433501,203.361795395403,158.116291679688,189.760187428138,166.672081003465,569.600606561678,350.865208193199,357.823216055873,483.433654581066,466.844016355424,451.669255143714,321.431588382217,493.593408745451,439.554430690863,249.856226683831,202.755834314622,40.7688383530633,21.3320010945999,176.223707383128,197.620695070577,212.320266906209,413.459828462716,90.6282592765101,170.856902063613,165.158031081361,158.322048722313,184.492397804847,256.982102142221,190.140939438435,351.740789131762,82.0687292878121,652.143099708802,145.076130519779,239.091404222271,270.530860113982,266.681389224372,342.960840641345,234.810199203261,210.493940347522,329.539601219083,303.611525498002,551.910512513935,313.355179962178,281.007239523447,300.120395449019,214.49197905666,327.658843562441,338.311550048027,332.668659339856,325.61821497699,192.170879585547,236.746465071007,436.452203814956,174.245856674,123.744541257531,173.346186742839,178.621632766906,163.966841805258,110.491274621756,132.08524561368,166.039455919839,177.470512326965,151.544299031788,127.45749803311,139.529241462011,201.879269565796,122.340789659263,137.907857942778,140.754981303033,189.878690544842,318.804787040209,410.469911847971,199.482776575706,288.319075369419,294.095679216295,449.795029529615,325.050521958494,487.975294733561,615.217246194865,720.390160836764,685.975087378826,969.85293370171,878.420478838159,966.453861033634,1004.19934384451,1166.09109970445,1095.55507530234,1156.1882976206,354.548853279119,196.753618869192,444.082844330224,308.613811296356,153.354252134833,137.251873069519,140.723267763726,180.103387488645,236.610238650942,250.52714959024,307.494831880844,280.317620940267,286.019467614707,258.444457181455,226.548269232418,274.139919639538,393.587388821818,363.43282368922,256.431002088566,178.341928183787,163.426216725967,202.022117222552,207.335208782192,219.244572977136,327.37555269228,559.147240546733,651.701719269547,672.761337701656,476.695824356135,144.487861550137,142.898389447299,150.657615297852,155.593713104982,143.259232892936,191.733266391409,199.085727115961,184.023482389665,358.851767036822,125.078339678798,278.361428856041,356.347022696828,382.404421211927,499.442399245004,501.258818696539,152.421381887449,175.469047299469,149.764813350222,167.029164402785,161.232200574201,147.908025321123,179.484905228054,152.984779920514,150.068657189094,171.635134477801,169.500419082909,175.825336689987,206.703923293477,172.710975946325,193.012843442268,230.616009939133,257.684479061975,190.67229169657,354.495702693045,405.083588862654,217.049867678718,543.822377198219,143.556239834397,155.785058974359,112.451013616521,93.1978312014953,102.487390077901,91.150642914004,125.896128220892,126.254530617687,98.8219444866309,256.414410504602,180.263908214501,243.059549005803,197.256107777181,208.357265314312,140.709846640361,127.459833981365,191.673135115652,189.548105154678,162.711342977306,176.16033977187,129.214146584111,124.328535481307,168.623259975973,146.641055682219,196.078611949498,225.866839713529,144.346392839606,135.766064899608,153.031322914999,155.180013362873,162.620994249965,161.423779929874,159.777099004659,107.476127037454,129.773454559232,119.473287967195,181.053814803124,169.832840529724,161.30296226921,238.959808565354,145.276142651817,116.868320618484,301.099704238636,299.276437444963,130.716223810357,133.945077308131,146.118482094703,173.675717358325,133.550260483442,142.75758008087,174.227890743702,168.221645693037,156.442370346608,536.524887324494,127.48340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| |||
|short_description=p1@Cox6c,p1@Gm6265 | |||
}} |
Revision as of 10:24, 13 September 2013
Short description: | p1@Cox6c, p1@Gm6265 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cox6c_5end, CAGE_peak_1_at_Gm6265_5end |
Coexpression cluster: | MCL_coexpression_mm9:282 |
Association with transcript: | 28bp_to_ENSMUST00000127999_5end |
EntrezGene: | 12864,621837 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 6.84e-09 | 23 |
circulatory system | 6.84e-09 | 23 |
epithelial tube | 3.90e-08 | 47 |
primary circulatory organ | 8.28e-08 | 18 |
heart | 8.28e-08 | 18 |
primitive heart tube | 8.28e-08 | 18 |
primary heart field | 8.28e-08 | 18 |
anterior lateral plate mesoderm | 8.28e-08 | 18 |
heart tube | 8.28e-08 | 18 |
heart primordium | 8.28e-08 | 18 |
cardiac mesoderm | 8.28e-08 | 18 |
cardiogenic plate | 8.28e-08 | 18 |
heart rudiment | 8.28e-08 | 18 |
compound organ | 4.58e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.