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FFCP PHASE1:Mm9::chr15:3533191..3533241,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=14600|HGNC=|UniProt=Q3UP14,P16882,Q3UNY8|association_with_transcript=0bp_to_ENSMUST00000069451,ENSMUST00000159508,ENSMUST00000162993,NM_001048178,NM_010284,uc007vcc.1,uc007vce.1_5end|description=CAGE_peak_1_at_Ghr_5end|id=chr15:3533191..3533241,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.36e-14!47;UBERON:0002100!3.62e-12!98;UBERON:0005177!8.71e-12!85;UBERON:0000466!8.80e-11!79;UBERON:0002365!5.96e-10!25;UBERON:0002330!5.96e-10!25;UBERON:0003104!1.14e-09!131;UBERON:0009142!1.14e-09!131;UBERON:0009569!1.72e-09!66;UBERON:0002107!1.65e-08!22;UBERON:0007499!1.65e-08!22;UBERON:0006925!1.65e-08!22;UBERON:0009497!1.65e-08!22;UBERON:0000015!1.65e-08!22;UBERON:0002423!1.65e-08!22;UBERON:0006235!1.65e-08!22;UBERON:0008835!1.65e-08!22;UBERON:0003894!1.65e-08!22;UBERON:0004161!1.65e-08!22;UBERON:0008836!1.65e-08!22;UBERON:0000926!2.34e-08!193;UBERON:0004120!2.34e-08!193;UBERON:0006603!2.34e-08!193;UBERON:0009854!2.64e-08!23;UBERON:0009856!2.64e-08!23;UBERON:0004921!1.11e-07!126;UBERON:0004185!1.11e-07!126;UBERON:0001048!1.35e-07!147;UBERON:0000077!1.90e-07!97;UBERON:0004535!2.17e-07!23;UBERON:0001009!2.17e-07!23;UBERON:0004119!2.59e-07!130;UBERON:0000925!2.59e-07!130;UBERON:0006595!2.59e-07!130;UBERON:0001041!3.17e-07!92;UBERON:0001007!3.28e-07!128;UBERON:0001555!3.28e-07!128;UBERON:0007026!3.28e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002100,9.63e-15,90;UBERON:0003914,1.33e-14,47;UBERON:0005177,4.38e-14,79;UBERON:0002365,5.86e-10,25;UBERON:0002330,5.86e-10,25;UBERON:0009569,1.69e-09,66;UBERON:0002107,1.63e-08,22;UBERON:0007499,1.63e-08,22;UBERON:0006925,1.63e-08,22;UBERON:0009497,1.63e-08,22;UBERON:0000015,1.63e-08,22;UBERON:0002423,1.63e-08,22;UBERON:0006235,1.63e-08,22;UBERON:0008835,1.63e-08,22;UBERON:0003894,1.63e-08,22;UBERON:0004161,1.63e-08,22;UBERON:0008836,1.63e-08,22;UBERON:0003104,2.08e-08,61;UBERON:0009142,2.08e-08,61;UBERON:0009854,2.61e-08,23;UBERON:0009856,2.61e-08,23;UBERON:0004535,2.15e-07,23;UBERON:0001009,2.15e-07,23;UBERON:0005256,7.13e-07,45|phase1_expression=17.6163731815273,1.39590163055744,2.72999543633722,6.95667686005709,11.0197060588196,5.87577451691614,4.20502753071946,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,41.2459957232688,1.68794617041505,3.91799683708403,4.95976510659561,3.67054849707472,3.44539178469012,2.15380998079537,3.23206849028834,7.60093677825496,6.04872311423834,2.21730510655305,0,0,0,12.4206196493048,6.64938581433969,11.4334839506927,0,0,0,0,0,0,143.270578856207,151.659889104394,68.2793918041455,25.0365230191373,3.92445281484804,6.37089929929968,7.97162586204562,10.9189408867783,12.9377307928474,0,0,0,126.571642529686,80.2293631828519,127.886678884806,0.606949382578793,0,3.80298842103708,16.2645375393183,9.78224275722253,2.6996991518442,0,4.2628806896766,2.99600110518405,3.84218305321555,0.725827286159344,0.540023753326763,0.841299845405528,3.99911378165325,5.52171352379034,0.734944795289724,0.479227355091182,0,4.40463523997555,3.19218345212969,3.68655679814984,1.05509030184155,1.46380229763855,3.12548022334056,1.67509799400829,8.4414391504752,4.12555268997387,6.48182888042069,5.97961059356232,3.91438836233131,11.9647385466431,13.9807386197553,17.971598299504,293.404542050653,229.83031079322,434.461069268443,323.588655888939,262.095728951941,147.185752298076,45.5048961283414,36.3700406444016,45.9341446863442,8.59144860637751,111.644035350457,188.555877382918,127.9920065676,12.123498296628,15.9616715249312,10.6160133453104,183.493494708529,12.1700805314171,31.9150598989373,13.1848848342263,7.30717147949139,10.6083128737787,9.94769427647309,15.0513545133702,43.7319737827271,592.526337659294,194.196936343441,15.9229899350977,27.9856650409018,25.6176161414057,25.2135131630315,22.3670113461747,2.92780797011547,2.30391377494801,12.2619386500124,0.239630249011841,0,0.127070227073065,5.69204429738326,5.49000723382352,1.63350657746724,4.34560800480691,3.83573185995496,3.74018480207208,2.92034273521964,29.7370942442924,28.8624171815416,7.83440551144392,10.7325346502102,5.20481771850815,13.104419952708,12.7844112161798,18.8381022294644,11.7022778540284,7.94305065766069,7.58983968933804,12.6764651662118,6.25147179505242,23.4491539408096,26.3926686245923,28.0570537507296,36.4241896485533,31.342694986995,25.516984914585,25.6754204195856,0,0,0,29.4118597000413,26.0323926579017,31.8709848785996,37.8791576936336,33.2531551653112,30.2363541259261,31.8571504308059,37.0217293931474,42.736115306384,54.9629898711025,59.5927894607116,72.9619285912702,77.3397933480008,78.8184913894872,82.2685347001079,5.25724871410318,2.46971069710283,12.2254949704005,10.8424732332053,34.7659848372431,46.2150977002273,58.3769599789083,73.8161700121434,63.8224985834778,68.4812254005213,27.9972146311262,69.8323568029806,84.1972949480903,81.771110008913,90.2683723361526,26.9645822596266,14.2651112917298,19.1175622324193,14.035424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|EntrezGene=14600
|HGNC=
|UniProt=Q3UP14,P16882,Q3UNY8
|association_with_transcript=0bp_to_ENSMUST00000069451,ENSMUST00000159508,ENSMUST00000162993,NM_001048178,NM_010284,uc007vcc.1,uc007vce.1_5end
|description=CAGE_peak_1_at_Ghr_5end
|id=chr15:3533191..3533241,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!1.36e-14!47;UBERON:0002100!3.62e-12!98;UBERON:0005177!8.71e-12!85;UBERON:0000466!8.80e-11!79;UBERON:0002365!5.96e-10!25;UBERON:0002330!5.96e-10!25;UBERON:0003104!1.14e-09!131;UBERON:0009142!1.14e-09!131;UBERON:0009569!1.72e-09!66;UBERON:0002107!1.65e-08!22;UBERON:0007499!1.65e-08!22;UBERON:0006925!1.65e-08!22;UBERON:0009497!1.65e-08!22;UBERON:0000015!1.65e-08!22;UBERON:0002423!1.65e-08!22;UBERON:0006235!1.65e-08!22;UBERON:0008835!1.65e-08!22;UBERON:0003894!1.65e-08!22;UBERON:0004161!1.65e-08!22;UBERON:0008836!1.65e-08!22;UBERON:0000926!2.34e-08!193;UBERON:0004120!2.34e-08!193;UBERON:0006603!2.34e-08!193;UBERON:0009854!2.64e-08!23;UBERON:0009856!2.64e-08!23;UBERON:0004921!1.11e-07!126;UBERON:0004185!1.11e-07!126;UBERON:0001048!1.35e-07!147;UBERON:0000077!1.90e-07!97;UBERON:0004535!2.17e-07!23;UBERON:0001009!2.17e-07!23;UBERON:0004119!2.59e-07!130;UBERON:0000925!2.59e-07!130;UBERON:0006595!2.59e-07!130;UBERON:0001041!3.17e-07!92;UBERON:0001007!3.28e-07!128;UBERON:0001555!3.28e-07!128;UBERON:0007026!3.28e-07!128
|ontology_enrichment_uberon_v019_2=UBERON:0002100,9.63e-15,90;UBERON:0003914,1.33e-14,47;UBERON:0005177,4.38e-14,79;UBERON:0002365,5.86e-10,25;UBERON:0002330,5.86e-10,25;UBERON:0009569,1.69e-09,66;UBERON:0002107,1.63e-08,22;UBERON:0007499,1.63e-08,22;UBERON:0006925,1.63e-08,22;UBERON:0009497,1.63e-08,22;UBERON:0000015,1.63e-08,22;UBERON:0002423,1.63e-08,22;UBERON:0006235,1.63e-08,22;UBERON:0008835,1.63e-08,22;UBERON:0003894,1.63e-08,22;UBERON:0004161,1.63e-08,22;UBERON:0008836,1.63e-08,22;UBERON:0003104,2.08e-08,61;UBERON:0009142,2.08e-08,61;UBERON:0009854,2.61e-08,23;UBERON:0009856,2.61e-08,23;UBERON:0004535,2.15e-07,23;UBERON:0001009,2.15e-07,23;UBERON:0005256,7.13e-07,45
|phase1_expression=17.6163731815273,1.39590163055744,2.72999543633722,6.95667686005709,11.0197060588196,5.87577451691614,4.20502753071946,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,41.2459957232688,1.68794617041505,3.91799683708403,4.95976510659561,3.67054849707472,3.44539178469012,2.15380998079537,3.23206849028834,7.60093677825496,6.04872311423834,2.21730510655305,0,0,0,12.4206196493048,6.64938581433969,11.4334839506927,0,0,0,0,0,0,143.270578856207,151.659889104394,68.2793918041455,25.0365230191373,3.92445281484804,6.37089929929968,7.97162586204562,10.9189408867783,12.9377307928474,0,0,0,126.571642529686,80.2293631828519,127.886678884806,0.606949382578793,0,3.80298842103708,16.2645375393183,9.78224275722253,2.6996991518442,0,4.2628806896766,2.99600110518405,3.84218305321555,0.725827286159344,0.540023753326763,0.841299845405528,3.99911378165325,5.52171352379034,0.734944795289724,0.479227355091182,0,4.40463523997555,3.19218345212969,3.68655679814984,1.05509030184155,1.46380229763855,3.12548022334056,1.67509799400829,8.4414391504752,4.12555268997387,6.48182888042069,5.97961059356232,3.91438836233131,11.9647385466431,13.9807386197553,17.971598299504,293.404542050653,229.83031079322,434.461069268443,323.588655888939,262.095728951941,147.185752298076,45.5048961283414,36.3700406444016,45.9341446863442,8.59144860637751,111.644035350457,188.555877382918,127.9920065676,12.123498296628,15.9616715249312,10.6160133453104,183.493494708529,12.1700805314171,31.9150598989373,13.1848848342263,7.30717147949139,10.6083128737787,9.94769427647309,15.0513545133702,43.7319737827271,592.526337659294,194.196936343441,15.9229899350977,27.9856650409018,25.6176161414057,25.2135131630315,22.3670113461747,2.92780797011547,2.30391377494801,12.2619386500124,0.239630249011841,0,0.127070227073065,5.69204429738326,5.49000723382352,1.63350657746724,4.34560800480691,3.83573185995496,3.74018480207208,2.92034273521964,29.7370942442924,28.8624171815416,7.83440551144392,10.7325346502102,5.20481771850815,13.104419952708,12.7844112161798,18.8381022294644,11.7022778540284,7.94305065766069,7.58983968933804,12.6764651662118,6.25147179505242,23.4491539408096,26.3926686245923,28.0570537507296,36.4241896485533,31.342694986995,25.516984914585,25.6754204195856,0,0,0,29.4118597000413,26.0323926579017,31.8709848785996,37.8791576936336,33.2531551653112,30.2363541259261,31.8571504308059,37.0217293931474,42.736115306384,54.9629898711025,59.5927894607116,72.9619285912702,77.3397933480008,78.8184913894872,82.2685347001079,5.25724871410318,2.46971069710283,12.2254949704005,10.8424732332053,34.7659848372431,46.2150977002273,58.3769599789083,73.8161700121434,63.8224985834778,68.4812254005213,27.9972146311262,69.8323568029806,84.1972949480903,81.771110008913,90.2683723361526,26.9645822596266,14.2651112917298,19.1175622324193,14.035424670528,29.5903647659198,29.3040112750009,34.4170744058581,39.5663073821957,47.4118142458553,48.8818431970509,79.414259613026,109.899109488962,129.567022117891,330.841131829258,19.0203420516347,20.2455764966599,17.9889689907883,25.5603752949514,34.0059795250908,44.8141499135299,57.8269236276129,34.3726680763075,80.995616890484,104.950790764969,148.856379067401,203.760600543808,212.671415231468,233.934227232574,226.266011519419,52.2851528171491,37.7087909423265,51.4969325556802,42.6060165295722,48.1115008991429,43.8866394497557,45.4663354092286,48.9785456123075,63.9998685071135,56.2520311707888,62.6657240823924,49.3228577294371,49.9059597592438,50.9164686206921,0,0.54390568381871,62.9458269464366,128.034650285396,5.61927064957272,4.33683240391152,57.049360991083,104.270492935406,9.4652465824877,8.98009111882268,4.95473814785438,5.4962823529087,8.68914828921337,6.51076020814315,13.3587531552715,11.9824901743638,11.4633455604492,5.14114106274891,51.240370760185,20.6556100254016,26.2248004559257,20.2913251256219,88.9392426877751,25.0064055239631,42.6276215320299,70.34969474895,62.3086993978431,91.6156740872904,68.4834976895786,90.8834323693764,73.0819625688679,76.7969321784033,61.1427929734993,78.383012868622,7.48967132658334,12.9643987702543,5.17434735131018,12.4315480318324,17.9113635978696,18.5503570306153,17.2776471632227,17.3545020995322,11.2642419870581,43.8492386688108,6.61585194164886,75.0232450883734,22.6050197374268,54.2213195104121,43.3321608731385,33.1564617485024,38.4754704351403,5.19190845629427,2.39219233116994,25.5919716274396,17.963869154862,2.82552685507037,2.7338845544205,3.43167259809784,1.01987057996313,1.39951452323658,0.690999869022119,39.1414953386197,47.6085670339609,54.8962561242491,50.546499504603,45.5812485311542,50.6601147891132,54.6200602858524,69.0982889863808,63.0831820181511,17.8868663142674,85.7448252059957,3.94585057078933,22.8760315447288,18.5313509311949,22.7507890362536,18.3406949338378,19.2609983059487,20.8895884789442,12.1090077904874,6.29156066554265,4.59009829569411,10.9451402377989,5.05617793005085,6.89265731986558,6.26536838705446,2.98817892848929,2.14832034800978,3.57626438606277,1.44234539423963,2.06765338044408,1.81739609906666,1.67654974641,1.61321896218945,2.72882066071307,1.92423683280659,1.63627663054197,31.9689840897448,5.54964883435162,4.48569283047379,4.53288464183012,38.0583500243415,52.9264580772333,17.0331010568557,35.3707825480459,12.5393026008841,2.25900737046827,2.76195141904306,2.29158205375759,2.23409137046794,2.05524755931193,3.7769694869485,3.37511250115903,2.70192721934532,1.35942722695261,6.21312374102184,6.01966615988225,25.138567024265,21.1709671135126,24.5537784238977,12.9960160829349,19.8550989126015,34.4482428092504,33.9957844444175,43.9659317140787,32.8506375292937,36.7544984840848,32.8209834011773,33.3363766592781,33.9973559269856,31.4172015187205,38.579788993929,35.1129507612912,32.7945674788299,38.3239887747075,35.0333429919866,30.1724942099166,32.3005967209994,31.950449452941,31.8308652424799,31.6207518195511,31.5612487435953,32.9270351170991,32.8837139297304,30.9633379568565,29.1793981262024,39.50546103535,30.3393805716735,31.1015592808964,33.1564840137967,34.3373767546432,15.7380664100906,31.1129039232393,32.445529161293,33.8580347761853,37.9417240885567,43.8230209322597
|short_description=p1@Ghr
}}

Revision as of 10:24, 13 September 2013

Short description:p1@Ghr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ghr_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000069451, ENSMUST00000159508, ENSMUST00000162993, NM_001048178, NM_010284, uc007vcc.1, uc007vce.1_5end
EntrezGene:Ghr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ghr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A341.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B97.60
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.42
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8143.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9151.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B368.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B725.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.37
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1126.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E180.23
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5127.89
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.26
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D911.96
Mouse Schwann, donor2.CNhs12573.11746-123F913.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7293.40
Mouse hepatocyte, donor1.CNhs13078.11714-123C4229.83
Mouse hepatocyte, donor3.CNhs12615.11637-122C8434.46
Mouse hepatocyte, donor6.CNhs13090.11822-124F4323.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F6262.10
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7147.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I745.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E336.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I845.93
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.59
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1111.64
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8188.56
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6127.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.62
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6183.49
accessory axillary lymph node, adult.CNhs10475.1063-29H912.17
adrenal gland, adult.CNhs10508.49-24D731.92
adrenal gland, embryo E14.CNhs11038.406-44C513.18
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I110.61
adrenal gland, embryo E18.CNhs11026.1262-18F59.95
adrenal gland, neonate N00.CNhs11191.1311-23C115.05
adrenal gland, neonate N25.CNhs11223.1377-27I343.73
amnion, adult pregnant day17.5.CNhs10488.583-22A8592.53
aorta, adult.CNhs10498.46-23H1194.20
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F527.99
bone (os femoris), neonate N16.CNhs11225.1525-43A625.62
bone (os femoris), neonate N20.CNhs11195.1350-25C325.21
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H712.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B129.74
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A228.86
epididymis, adult.CNhs10490.58-23B27.83
eyeball, adult.CNhs10484.31-12G410.73
eyeball, embryo E12.CNhs11016.345-16C65.20
eyeball, embryo E14.CNhs10521.399-16E213.10
eyeball, embryo E15.CNhs10593.426-16C912.78
eyeball, embryo E17.CNhs11023.1261-18D418.84
eyeball, neonate N00.CNhs11207.633-15C611.70
eyeball, neonate N01.CNhs11140.1532-43E77.94
eyeball, neonate N02.CNhs11205.1551-44G87.59
eyeball, neonate N16.CNhs11188.777-19A212.68
forelimb, embryo E11.CNhs10596.335-25E26.25
forelimb, embryo E12.CNhs10600.359-14H223.45
forelimb, embryo E13.CNhs10589.384-1E226.39
forelimb, embryo E14.CNhs10577.413-26A828.06
forelimb, embryo E15.CNhs11007.437-20E736.42
forelimb, embryo E17.CNhs10598.1517-43C431.34
forelimb, embryo E18.CNhs11008.1520-43B525.52
gonad, embryo E13.CNhs11044.1564-45I625.68
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E929.41
heart, embryo E12.CNhs11015.353-12F526.03
heart, embryo E13.CNhs11013.376-3I931.87
heart, embryo E14.CNhs10597.403-26D437.88
heart, embryo E15.CNhs11017.431-16C833.25
heart, embryo E16.CNhs11021.457-17C630.24
heart, embryo E17.CNhs11025.479-18E531.86
heart, embryo E18.CNhs11030.1283-20G337.02
heart, neonate N00.CNhs11213.639-21E342.74
heart, neonate N03.CNhs11221.1349-25I254.96
heart, neonate N10.CNhs11118.749-24G159.59
heart, neonate N16.CNhs11209.782-15G172.96
heart, neonate N20.CNhs11127.821-26I677.34
heart, neonate N25.CNhs11196.1351-25D378.82
heart, neonate N30.CNhs11202.1390-42D282.27
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I312.23
intestine, adult.CNhs10496.178-9A310.84
intestine, embryo E12.CNhs11019.1251-16I534.77
intestine, embryo E13.CNhs11010.381-16D546.22
intestine, embryo E15.CNhs10602.976-16D858.38
intestine, embryo E16.CNhs10585.463-22H473.82
intestine, embryo E17.CNhs10582.482-18D363.82
intestine, embryo E18.CNhs10526.1289-20F768.48
intestine, neonate N00.CNhs11126.644-26D128.00
intestine, neonate N01.CNhs11192.1322-23E969.83
intestine, neonate N06.CNhs11102.688-20B884.20
intestine, neonate N07.CNhs11095.720-20F281.77
intestine, neonate N10.CNhs11098.755-23A590.27
intestine, neonate N20.CNhs11187.827-18D126.96
intestine, neonate N25.CNhs11121.1352-25E314.27
intestine, neonate N30.CNhs11131.1384-42G119.12
kidney, embryo E14.CNhs10606.411-4I914.04
kidney, embryo E15.CNhs10997.434-16F829.59
kidney, embryo E16.CNhs10584.464-22A529.30
kidney, embryo E17.CNhs11028.483-18I234.42
kidney, embryo E18.CNhs11001.1288-20C739.57
kidney, neonate N00.CNhs11214.646-21G747.41
kidney, neonate N10.CNhs11206.758-6D548.88
kidney, neonate N20.CNhs11113.832-19I179.41
kidney, neonate N25.CNhs11122.1353-25F3109.90
kidney, neonate N30.CNhs11203.1385-42H1129.57
liver, adult pregnant day01.CNhs10466.508-5B2330.84
liver, embryo E12.CNhs10601.355-15F819.02
liver, embryo E13.CNhs10524.378-3H620.25
liver, embryo E14.CNhs10594.409-16E117.99
liver, embryo E15.CNhs10520.433-16D725.56
liver, embryo E16.CNhs10523.462-17F534.01
liver, embryo E17.CNhs10510.481-18A344.81
liver, embryo E18.CNhs10579.499-43G457.83
liver, neonate N00.CNhs11117.641-24F434.37
liver, neonate N03.CNhs11123.1345-25G281.00
liver, neonate N06.CNhs11101.684-20A8104.95
liver, neonate N07.CNhs11103.716-20H2148.86
liver, neonate N10.CNhs11115.751-24B9203.76
liver, neonate N20.CNhs11220.823-25A3212.67
liver, neonate N25.CNhs11198.1368-26H1233.93
liver, neonate N30.CNhs11106.1382-42D1226.27
lung, adult.CNhs10474.28-22B152.29
lung, embryo E12.CNhs10522.354-16G237.71
lung, embryo E14.CNhs10604.404-26F851.50
lung, embryo E15.CNhs11020.432-17C542.61
lung, embryo E16.CNhs10998.458-17B648.11
lung, embryo E17.CNhs10605.480-44A643.89
lung, embryo E18.CNhs10583.1287-20I645.47
lung, neonate N00.CNhs11224.640-42C648.98
lung, neonate N06.CNhs11212.683-20E564.00
lung, neonate N07.CNhs11111.715-19A356.25
lung, neonate N10.CNhs11219.750-23E662.67
lung, neonate N20.CNhs11109.822-18A449.32
lung, neonate N25.CNhs11119.1359-25C749.91
lung, neonate N30.CNhs11133.1394-42H250.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B662.95
mammary gland, adult pregnant day19.CNhs10476.588-5H2128.03
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C757.05
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2104.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I751.24
ovary, embryo E18.CNhs11040.505-44H720.66
ovary, neonate N00.CNhs11217.1299-22I426.22
oviduct, adult pregnant day01.CNhs10500.988-6G620.29
pancreas, adult.CNhs10486.34-16E488.94
pancreas, embryo E14.CNhs11012.405-44F425.01
pancreas, embryo E15.CNhs11042.1556-45F242.63
pancreas, embryo E16.CNhs11003.460-26E570.35
pancreas, embryo E17.CNhs10599.1558-45G362.31
pancreas, embryo E18.CNhs10580.1535-43I791.62
pancreas, neonate N00.CNhs11105.645-26G968.48
pancreas, neonate N01.CNhs11138.1531-43D790.88
pancreas, neonate N02.CNhs11139.1539-43D873.08
pancreas, neonate N16.CNhs11136.787-43B676.80
pancreas, neonate N25.CNhs11094.1555-45E261.14
pancreas, neonate N30.CNhs11182.1548-44H578.38
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E612.96
pituitary gland, embryo E13.CNhs11009.370-44C75.17
pituitary gland, embryo E14.CNhs11037.398-44A512.43
pituitary gland, embryo E15.CNhs10592.427-16B917.91
pituitary gland, embryo E16.CNhs11036.449-43F618.55
pituitary gland, embryo E17.CNhs11039.1265-44F517.28
pituitary gland, neonate N00.CNhs11190.1308-22E917.35
placenta, adult pregnant day10.CNhs10472.539-13I711.26
placenta, adult pregnant day17.CNhs10464.577-18G343.85
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C375.02
skin, neonate N00.CNhs11124.650-25G422.61
skin, neonate N03.CNhs11215.662-22H354.22
skin, neonate N06.CNhs11097.693-20I543.33
skin, neonate N10.CNhs11108.762-6C433.16
small intestine, neonate N16.CNhs11114.790-21I138.48
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C125.59
spleen, embryo E18.CNhs11011.1271-21F217.96
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H639.14
stomach, embryo E12.CNhs10588.356-43E347.61
stomach, embryo E15.CNhs10603.1252-16G854.90
stomach, embryo E16.CNhs11022.459-17D450.55
stomach, embryo E17.CNhs11006.1035-18D545.58
stomach, embryo E18.CNhs10999.1286-20C650.66
stomach, neonate N03.CNhs11193.1340-24B854.62
stomach, neonate N07.CNhs11210.718-18A969.10
stomach, neonate N25.CNhs11104.1355-25E463.08
stomach, neonate N30.CNhs11134.1386-42I117.89
submandibular gland, adult.CNhs10469.59-29C185.74
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F522.88
testis, embryo E15.CNhs11034.443-27C518.53
testis, embryo E16.CNhs11033.470-26G522.75
testis, embryo E17.CNhs11029.486-18I518.34
testis, embryo E18.CNhs11027.503-18G519.26
testis, neonate N00.CNhs11189.1300-22B720.89
testis, neonate N07.CNhs11222.726-26I412.11
testis, neonate N10.CNhs11204.763-44D96.29
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E210.95
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I46.89
thymus, embryo E15.CNhs11005.430-45I26.27
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D31.68
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G71.92
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B431.97
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.49
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.53
urinary bladder, adult.CNhs10481.879-12E438.06
uterus, adult pregnant day19.CNhs10497.590-15F552.93
uterus, adult.CNhs10509.92-27E517.03
vagina, adult.CNhs10502.89-27D535.37
vesicular gland, adult.CNhs10491.51-27F812.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I86.02
whole body, embryo E12.CNhs10587.857-27C925.14
whole body, embryo E13.CNhs10512.372-23H221.17
whole body, embryo E14.5.CNhs10578.420-27D224.55
whole body, embryo E14.CNhs10519.395-14B113.00
whole body, embryo E16.CNhs10514.453-14F219.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G534.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G534.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G543.97
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G532.85
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G536.75
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G532.82
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G533.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G534.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G531.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G538.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G535.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G532.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G538.32
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G535.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G530.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G532.30
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G531.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G531.83
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G531.62
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G531.56
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G532.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G532.88
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G530.96
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.18
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G539.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G530.34
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G531.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.16
whole body, embryo E17.5.CNhs10513.490-9F934.34
whole body, embryo E17.CNhs10517.475-3I515.74
whole body, embryo E18.CNhs10516.493-3B331.11
whole body, neonate N00.CNhs10525.657-19C232.45
whole body, neonate N01.CNhs10576.659-23C633.86
whole body, neonate N06.CNhs10515.692-21D137.94
whole body, neonate N10.CNhs10518.761-6B443.82





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk9.63e-1590
epithelial tube1.33e-1447
trunk region element4.38e-1479
exocrine gland5.86e-1025
exocrine system5.86e-1025
subdivision of trunk1.69e-0966
liver1.63e-0822
epithelial sac1.63e-0822
digestive gland1.63e-0822
epithelium of foregut-midgut junction1.63e-0822
anatomical boundary1.63e-0822
hepatobiliary system1.63e-0822
foregut-midgut junction1.63e-0822
hepatic diverticulum1.63e-0822
liver primordium1.63e-0822
septum transversum1.63e-0822
liver bud1.63e-0822
mesenchyme2.08e-0861
entire embryonic mesenchyme2.08e-0861
digestive tract diverticulum2.61e-0823
sac2.61e-0823
cardiovascular system2.15e-0723
circulatory system2.15e-0723
trunk mesenchyme7.13e-0745







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