FFCP PHASE1:Mm9::chr15:102109877..102109906,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=106073|HGNC=|UniProt=Q921Y4|association_with_transcript=0bp_to_ENSMUST00000051341,NM_134100,uc007xve.1_5end|description=CAGE_peak_2_at_Mfsd5_5end|id=chr15:102109877..102109906,+|ontology_enrichment_celltype=CL:0000723!1.28e-15!91;CL:0000048!1.28e-15!91;CL:0000055!2.47e-15!50;CL:0002319!2.90e-15!43;CL:0000221!3.67e-15!44;CL:0000133!3.67e-15!44;CL:0002371!1.99e-14!118;CL:0000034!2.40e-14!97;CL:0000548!2.26e-13!115;CL:0000004!2.26e-13!115;CL:0000255!2.26e-13!115;CL:0000144!7.94e-13!121;CL:0000012!7.94e-13!121;CL:0000393!9.76e-11!39;CL:0000211!9.76e-11!39;CL:0000540!1.09e-10!33;CL:0000047!1.09e-10!33;CL:0000031!1.09e-10!33;CL:0000404!1.09e-10!33;CL:0000117!2.15e-09!23;CL:0000337!2.15e-09!23;CL:0000219!3.92e-09!54;CL:0002321!3.79e-08!70;CL:0000220!3.79e-08!70|ontology_enrichment_celltype_v019_2=CL:0000723,1.28e-15,91;CL:0000048,1.28e-15,91;CL:0002319,2.90e-15,43;CL:0000221,3.67e-15,44;CL:0000133,3.67e-15,44;CL:0000034,2.40e-14,97;CL:0000393,9.76e-11,39;CL:0000211,9.76e-11,39;CL:0000540,1.09e-10,33;CL:0000047,1.09e-10,33;CL:0000031,1.09e-10,33;CL:0000404,1.09e-10,33;CL:0000117,2.15e-09,23;CL:0000337,2.15e-09,23;CL:0000219,3.92e-09,54;CL:0002321,3.79e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.84e-14!75;UBERON:0001016!8.84e-14!75;UBERON:0001017!6.19e-13!73;UBERON:0005743!6.19e-13!73;UBERON:0004121!2.98e-11!102;UBERON:0000924!2.98e-11!102;UBERON:0006601!2.98e-11!102;UBERON:0002020!8.78e-08!34;UBERON:0001049!6.58e-07!52;UBERON:0005068!6.58e-07!52;UBERON:0006241!6.58e-07!52;UBERON:0007135!6.58e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.84e-14,75;UBERON:0001017,6.19e-13,73;UBERON:0004121,2.67e-12,95;UBERON:0000924,2.67e-12,95;UBERON:0006601,2.67e-12,95;UBERON:0002020,8.78e-08,34;UBERON:0000073,1.20e-07,54;UBERON:0001049,6.58e-07,52;UBERON:0005068,6.58e-07,52;UBERON:0006241,6.58e-07,52;UBERON:0007135,6.58e-07,52|phase1_expression=11.3705681444404,7.32848356042658,9.09998478779072,7.56160528267075,5.50985302940982,6.37941233265181,4.90586545250604,11.1046058159756,11.9670413828917,18.0229685267935,25.8539132020513,25.9259516734843,10.2720437958723,13.2004807652686,9.66018309265422,8.09901069559304,7.69518065940961,12.1452933662922,13.3001000597567,11.0341309467488,7.99406927420056,11.6170412905036,9.92559198727954,8.15961356246374,9.40578052375397,10.3361753540704,6.46142994238612,5.38678081714723,11.4014051673824,9.8291750606373,11.0865255327652,15.8757668364908,19.0670084151217,15.8481681015439,4.91047753577167,5.65197794218874,7.14592746918292,24.6933662134776,19.533383613095,10.9939986234498,18.2351761289614,17.7591826089196,16.0218416500281,13.7227531593379,12.3679856087808,18.3546752161682,29.7308710852255,16.7879370412944,13.6205433295373,14.1933826324227,16.6583841734181,14.3752564364972,9.73139115134871,5.07753499407941,6.04968838456435,11.8339340576536,8.30946975822394,10.3134418455488,19.4223802425214,15.340738398889,19.0149421051854,25.0744953731158,20.4537803105562,32.3963898221304,41.5323872278129,39.7868864369816,29.9600110518405,31.1216827310459,12.6501327016343,12.6905582031789,13.8814474491912,18.852964970651,20.5407743085001,15.0663683034393,10.4471563409878,15.6267193723704,19.82085857989,15.4501679083077,14.8998337258556,17.672762555846,17.4741399280602,11.9810075228055,17.8677119360884,14.6318278608237,15.7382195210114,17.9723437138937,14.2371680799103,19.199142920006,22.7178579999552,14.1318817399689,4.92769630792852,12.0459342777394,19.039197343817,10.7940638327563,18.1937396885347,8.96053774194671,12.0782201313307,12.9527045159324,14.5480162577607,14.1335829804136,11.2674735821344,8.98285341900225,7.64415719119937,7.11066703153331,18.6182295269644,13.1747130047051,13.1436355703844,7.65031994117702,14.5005214842416,10.6878340126674,11.9704875468634,12.1786191324856,8.07154240396205,7.988299949289,7.99603208522793,9.80199412371469,14.3373081285937,7.37456720291549,16.8076004870476,7.117741397686,6.18356251689102,4.84875253135222,16.775258509631,9.07620470735796,12.9856958224342,13.0283098156382,9.58520996047362,13.197860081855,10.2926883929182,11.6836698735762,16.0125210986519,12.1884721549478,12.5153510538439,15.5986428971502,15.9996794310861,14.1149898868949,9.67473956578005,7.58882520721567,8.59257378674494,8.41767423545896,10.1493945510909,9.19608417733892,12.0641626969584,9.0422890701429,8.77670839052129,4.99643509110914,9.93238280333126,6.46758426847539,17.2454394346274,11.1572587299013,10.0292140773451,11.3981780862339,8.61946472599353,13.9300866608867,9.05441400194951,8.35943920637671,11.2354109970118,12.0953516343916,18.4706274607135,11.8061690345236,11.2572508790926,9.54328925743379,10.180023630164,10.231740050865,8.63895832169318,7.90615412151387,9.92611585178591,10.9759421825139,7.07607354627966,7.71587081171748,7.21512404958116,8.91819923294527,7.90380415047782,8.58921080066379,13.6688466566683,9.46722433889417,14.5384264512871,5.55346189993443,11.0909890278322,7.43157349953403,9.9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| ||
|EntrezGene=106073 | |||
|HGNC= | |||
|UniProt=Q921Y4 | |||
|association_with_transcript=0bp_to_ENSMUST00000051341,NM_134100,uc007xve.1_5end | |||
|description=CAGE_peak_2_at_Mfsd5_5end | |||
|id=chr15:102109877..102109906,+ | |||
|ontology_enrichment_celltype=CL:0000723!1.28e-15!91;CL:0000048!1.28e-15!91;CL:0000055!2.47e-15!50;CL:0002319!2.90e-15!43;CL:0000221!3.67e-15!44;CL:0000133!3.67e-15!44;CL:0002371!1.99e-14!118;CL:0000034!2.40e-14!97;CL:0000548!2.26e-13!115;CL:0000004!2.26e-13!115;CL:0000255!2.26e-13!115;CL:0000144!7.94e-13!121;CL:0000012!7.94e-13!121;CL:0000393!9.76e-11!39;CL:0000211!9.76e-11!39;CL:0000540!1.09e-10!33;CL:0000047!1.09e-10!33;CL:0000031!1.09e-10!33;CL:0000404!1.09e-10!33;CL:0000117!2.15e-09!23;CL:0000337!2.15e-09!23;CL:0000219!3.92e-09!54;CL:0002321!3.79e-08!70;CL:0000220!3.79e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.28e-15,91;CL:0000048,1.28e-15,91;CL:0002319,2.90e-15,43;CL:0000221,3.67e-15,44;CL:0000133,3.67e-15,44;CL:0000034,2.40e-14,97;CL:0000393,9.76e-11,39;CL:0000211,9.76e-11,39;CL:0000540,1.09e-10,33;CL:0000047,1.09e-10,33;CL:0000031,1.09e-10,33;CL:0000404,1.09e-10,33;CL:0000117,2.15e-09,23;CL:0000337,2.15e-09,23;CL:0000219,3.92e-09,54;CL:0002321,3.79e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.84e-14!75;UBERON:0001016!8.84e-14!75;UBERON:0001017!6.19e-13!73;UBERON:0005743!6.19e-13!73;UBERON:0004121!2.98e-11!102;UBERON:0000924!2.98e-11!102;UBERON:0006601!2.98e-11!102;UBERON:0002020!8.78e-08!34;UBERON:0001049!6.58e-07!52;UBERON:0005068!6.58e-07!52;UBERON:0006241!6.58e-07!52;UBERON:0007135!6.58e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.84e-14,75;UBERON:0001017,6.19e-13,73;UBERON:0004121,2.67e-12,95;UBERON:0000924,2.67e-12,95;UBERON:0006601,2.67e-12,95;UBERON:0002020,8.78e-08,34;UBERON:0000073,1.20e-07,54;UBERON:0001049,6.58e-07,52;UBERON:0005068,6.58e-07,52;UBERON:0006241,6.58e-07,52;UBERON:0007135,6.58e-07,52 | |||
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| |||
|short_description=p2@Mfsd5 | |||
}} |
Revision as of 10:04, 13 September 2013
Short description: | p2@Mfsd5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mfsd5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000051341, NM_134100, uc007xve.1_5end |
EntrezGene: | Mfsd5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.28e-15 | 91 |
multi fate stem cell | 1.28e-15 | 91 |
neural cell | 2.90e-15 | 43 |
ectodermal cell | 3.67e-15 | 44 |
neurectodermal cell | 3.67e-15 | 44 |
stem cell | 2.40e-14 | 97 |
electrically responsive cell | 9.76e-11 | 39 |
electrically active cell | 9.76e-11 | 39 |
neuron | 1.09e-10 | 33 |
neuronal stem cell | 1.09e-10 | 33 |
neuroblast | 1.09e-10 | 33 |
electrically signaling cell | 1.09e-10 | 33 |
CNS neuron (sensu Vertebrata) | 2.15e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.15e-09 | 23 |
motile cell | 3.92e-09 | 54 |
embryonic cell | 3.79e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.84e-14 | 75 |
central nervous system | 6.19e-13 | 73 |
ectoderm-derived structure | 2.67e-12 | 95 |
ectoderm | 2.67e-12 | 95 |
presumptive ectoderm | 2.67e-12 | 95 |
gray matter | 8.78e-08 | 34 |
regional part of nervous system | 1.20e-07 | 54 |
neural tube | 6.58e-07 | 52 |
neural rod | 6.58e-07 | 52 |
future spinal cord | 6.58e-07 | 52 |
neural keel | 6.58e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.