FFCP PHASE1:Hg19::chr4:152608451..152608473,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5188|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8849|TSSclassifier=S|UniProt=|association_with_transcript=-216bp_to_ENST00000507592_5end|coexpression_cluster_id=C20|description=CAGE_peak_7_at_PET112_5end|id=chr4:152608451..152608473,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002253;4.55e-07;2|ontology_enrichment_celltype_v019_2=CL:0002253,5.28e-07,2|ontology_enrichment_development_v019=UBERON:0010226;1.61e-13;1!UBERON:0010227;2.46e-13;1!UBERON:0000358;3.14e-13;1!UBERON:0005062;6.84e-13;4!UBERON:0007284;6.84e-13;4!UBERON:0007297;4.55e-07;2|ontology_enrichment_disease=DOID:114!2.87e-07!2|ontology_enrichment_disease_v019=DOID:114;8.49e-25;2!DOID:178;3.99e-13;1!DOID:326;3.99e-13;1!DOID:3978;3.99e-13;1!DOID:3394;3.99e-13;1!DOID:5844;3.99e-13;1!DOID:1287;6.64e-13;4|ontology_enrichment_disease_v019_2=DOID:114,8.00e-25,2;DOID:178,3.76e-13,1;DOID:326,3.76e-13,1;DOID:3978,3.76e-13,1;DOID:3394,3.76e-13,1;DOID:5844,3.76e-13,1;DOID:1287,6.44e-13,4|ontology_enrichment_uberon=UBERON:0007023!9.76e-16!115;UBERON:0006947!1.29e-09!3;UBERON:0004054!1.29e-09!3;UBERON:0003075!5.79e-09!86;UBERON:0007284!5.79e-09!86;UBERON:0002346!2.41e-08!90;UBERON:0001049!9.69e-08!57;UBERON:0005068!9.69e-08!57;UBERON:0006241!9.69e-08!57;UBERON:0007135!9.69e-08!57;UBERON:0007100!2.32e-07!27;UBERON:0005904!2.74e-07!4;UBERON:0005743!8.21e-07!86;UBERON:0003103!9.08e-07!69|ontology_enrichment_uberon_v019=UBERON:0007100;8.10e-23;25!UBERON:0004151;4.70e-17;3!UBERON:0003978;7.29e-17;3!UBERON:0000946;7.29e-17;3!UBERON:0006947;2.57e-16;3!UBERON:0004054;2.57e-16;3!UBERON:0002084;1.61e-13;1!UBERON:0002082;1.61e-13;1!UBERON:0002079;2.46e-13;1!UBERON:0002146;2.46e-13;1!UBERON:0005623;2.46e-13;1!UBERON:0002135;3.14e-13;1!UBERON:0001000;7.24e-13;1!UBERON:0001301;7.24e-13;1!UBERON:0005352;7.24e-13;1!UBERON:0005904;1.75e-12;4!UBERON:0000948;5.78e-09;22!UBERON:0002081;2.66e-07;2!UBERON:0002133;3.00e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.34e-21,27;UBERON:0004151,4.52e-17,3;UBERON:0003978,7.90e-17,3;UBERON:0009751,7.90e-17,3;UBERON:0000946,7.90e-17,3;UBERON:0002523,7.90e-17,3;UBERON:0005983,7.90e-17,3;UBERON:0002165,7.90e-17,3;UBERON:0002062,7.90e-17,3;UBERON:0007280,7.90e-17,3;UBERON:0006947,3.80e-16,3;UBERON:0004054,3.80e-16,3;UBERON:0002084,1.61e-13,1;UBERON:0002082,1.61e-13,1;UBERON:0010226,1.61e-13,1;UBERON:0002079,2.32e-13,1;UBERON:0002146,2.62e-13,1;UBERON:0005623,2.62e-13,1;UBERON:0002135,3.33e-13,1;UBERON:0001000,8.64e-13,1;UBERON:0005352,8.64e-13,1;UBERON:0001301,1.09e-12,1;UBERON:0005904,2.35e-12,4;UBERON:0003103,2.49e-10,68;UBERON:0000948,3.15e-08,24;UBERON:0005498,3.15e-08,24;UBERON:0004140,3.15e-08,24;UBERON:0009881,3.15e-08,24;UBERON:0004141,3.15e-08,24;UBERON:0003084,3.15e-08,24;UBERON:0007005,3.15e-08,24;UBERON:0004139,3.15e-08,24;UBERON:0004291,3.15e-08,24;UBERON:0004797,9.88e-08,7;UBERON:0007023,2.55e-07,114;UBERON:0002081,2.58e-07,2;UBERON:0010227,2.58e-07,2;UBERON:0002133,3.09e-07,2|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08194319871046,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,4.46851842035607,5.49985017628041,0,2.79550600698588,7.2968428183217,6.02562935093056,0.739018197353989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0,5.71756261098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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5188 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8849 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-216bp_to_ENST00000507592_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_7_at_PET112_5end | |||
|id=chr4:152608451..152608473,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.61e-13;1!UBERON:0010227;2.46e-13;1!UBERON:0000358;3.14e-13;1!UBERON:0005062;6.84e-13;4!UBERON:0007284;6.84e-13;4!UBERON:0007297;4.55e-07;2 | |||
|ontology_enrichment_disease=DOID:114!2.87e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;8.49e-25;2!DOID:178;3.99e-13;1!DOID:326;3.99e-13;1!DOID:3978;3.99e-13;1!DOID:3394;3.99e-13;1!DOID:5844;3.99e-13;1!DOID:1287;6.64e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.00e-25,2;DOID:178,3.76e-13,1;DOID:326,3.76e-13,1;DOID:3978,3.76e-13,1;DOID:3394,3.76e-13,1;DOID:5844,3.76e-13,1;DOID:1287,6.44e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.76e-16!115;UBERON:0006947!1.29e-09!3;UBERON:0004054!1.29e-09!3;UBERON:0003075!5.79e-09!86;UBERON:0007284!5.79e-09!86;UBERON:0002346!2.41e-08!90;UBERON:0001049!9.69e-08!57;UBERON:0005068!9.69e-08!57;UBERON:0006241!9.69e-08!57;UBERON:0007135!9.69e-08!57;UBERON:0007100!2.32e-07!27;UBERON:0005904!2.74e-07!4;UBERON:0005743!8.21e-07!86;UBERON:0003103!9.08e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.10e-23;25!UBERON:0004151;4.70e-17;3!UBERON:0003978;7.29e-17;3!UBERON:0000946;7.29e-17;3!UBERON:0006947;2.57e-16;3!UBERON:0004054;2.57e-16;3!UBERON:0002084;1.61e-13;1!UBERON:0002082;1.61e-13;1!UBERON:0002079;2.46e-13;1!UBERON:0002146;2.46e-13;1!UBERON:0005623;2.46e-13;1!UBERON:0002135;3.14e-13;1!UBERON:0001000;7.24e-13;1!UBERON:0001301;7.24e-13;1!UBERON:0005352;7.24e-13;1!UBERON:0005904;1.75e-12;4!UBERON:0000948;5.78e-09;22!UBERON:0002081;2.66e-07;2!UBERON:0002133;3.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.34e-21,27;UBERON:0004151,4.52e-17,3;UBERON:0003978,7.90e-17,3;UBERON:0009751,7.90e-17,3;UBERON:0000946,7.90e-17,3;UBERON:0002523,7.90e-17,3;UBERON:0005983,7.90e-17,3;UBERON:0002165,7.90e-17,3;UBERON:0002062,7.90e-17,3;UBERON:0007280,7.90e-17,3;UBERON:0006947,3.80e-16,3;UBERON:0004054,3.80e-16,3;UBERON:0002084,1.61e-13,1;UBERON:0002082,1.61e-13,1;UBERON:0010226,1.61e-13,1;UBERON:0002079,2.32e-13,1;UBERON:0002146,2.62e-13,1;UBERON:0005623,2.62e-13,1;UBERON:0002135,3.33e-13,1;UBERON:0001000,8.64e-13,1;UBERON:0005352,8.64e-13,1;UBERON:0001301,1.09e-12,1;UBERON:0005904,2.35e-12,4;UBERON:0003103,2.49e-10,68;UBERON:0000948,3.15e-08,24;UBERON:0005498,3.15e-08,24;UBERON:0004140,3.15e-08,24;UBERON:0009881,3.15e-08,24;UBERON:0004141,3.15e-08,24;UBERON:0003084,3.15e-08,24;UBERON:0007005,3.15e-08,24;UBERON:0004139,3.15e-08,24;UBERON:0004291,3.15e-08,24;UBERON:0004797,9.88e-08,7;UBERON:0007023,2.55e-07,114;UBERON:0002081,2.58e-07,2;UBERON:0010227,2.58e-07,2;UBERON:0002133,3.09e-07,2 | |||
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|short_description=p7@PET112 | |||
}} |
Revision as of 02:46, 13 September 2013
Short description: | p7@PET112 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PET112_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -216bp_to_ENST00000507592_5end |
EntrezGene: | PET112 |
HGNC: | 8849 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.00e-25 | 2 |
vascular disease | 3.76e-13 | 1 |
ischemia | 3.76e-13 | 1 |
extrinsic cardiomyopathy | 3.76e-13 | 1 |
myocardial ischemia | 3.76e-13 | 1 |
myocardial infarction | 3.76e-13 | 1 |
cardiovascular system disease | 6.44e-13 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.