FFCP PHASE1:Mm9::chr14:58364881..58364981,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=50523|HGNC=|UniProt=Q7TSJ6,G3UY78,G3UZ29,G3UXG3|association_with_transcript=0bp_to_ENSMUST00000022531,ENSMUST00000173990,ENSMUST00000174213,ENSMUST00000174694,NM_015771,uc007udj.1,uc007udk.1,uc007udl.1,uc011zmg.1_5end|description=CAGE_peak_1_at_Lats2_5end|id=chr14:58364881..58364981,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!1.10e-09!33;UBERON:0004535!4.44e-08!23;UBERON:0001009!4.44e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.10e-09,33;UBERON:0004535,4.44e-08,23;UBERON:0001009,4.44e-08,23;UBERON:0000926,5.38e-07,120;UBERON:0004120,5.38e-07,120;UBERON:0006603,5.38e-07,120|phase1_expression=24.0223270657191,56.8829914452159,52.3249125297966,42.0425253716494,38.0680754759224,11.2479112180966,10.2789561862031,51.3910827297474,56.8786437492734,43.7700664222128,5.99262888789267,4.46724090373884,49.134609490256,48.6057437449626,24.9832321361747,24.7019826215588,32.1798463938947,59.4646181700278,63.8953260602743,77.2389166272415,59.6153463958999,13.2056965097177,8.35839325244593,15.9992422793407,15.8292403936347,36.1766137392463,24.1226717849082,17.8841123129288,19.0023419456374,15.6258680451157,10.4213340007993,0,0,0,0.288851619751275,0.831173226792462,1.42918549383658,115.933261714123,66.413504284523,102.610653818864,98.2346585011794,101.773777258808,107.297788019885,88.1277725829041,91.3406150287826,79.1086501816848,71.1976123356716,119.477785696485,106.987170991688,124.629565306616,69.2932787045544,86.2515386189829,103.857433149739,79.7898356212479,62.1773528413558,74.0907175783527,70.2006927849954,105.712778916876,11.7343547298567,7.93486468908049,3.1691570175309,46.082856361402,33.7932022522233,20.6976934974722,15.8218618010716,23.4458437932213,30.5592112728773,27.2794996778304,9.64313394468842,11.340498819862,10.3059231062177,12.2829923293636,12.1477697523387,8.57435594504678,10.4471563409878,9.19218786610021,15.4162233399144,23.7498448838449,27.0347498530989,7.38563211289086,6.40413505216868,3.12548022334056,20.1011759280994,19.1339287410771,25.3645091309505,15.9099436155781,9.681274294339,8.20157561631323,38.6203585999239,35.3674901299756,115.076202014566,36.1378028332182,30.5987100168488,12.9528765993076,16.8941868536394,15.2329141613094,27.8079951860869,31.3591793543626,20.2633083590238,23.6737514921928,27.0419365971227,100.094652383168,109.566253073858,213.320010945999,24.8964697162896,26.3494260094103,39.4309067111531,27.0615794934172,42.7247508017833,39.1887247131137,18.0424739836781,21.9215144384742,24.9064737036543,21.7040602395776,41.2736362046324,30.1599819191221,41.0343646439061,58.1289414818045,42.461306493594,41.897614136379,34.6721183982818,27.6378894287077,22.3670113461747,50.6510778829977,32.673686262899,17.1156226989756,28.9952601304327,19.196887391789,24.2704133709554,30.7070810779887,23.33253074375,4.77486538028885,17.5562563394199,14.8314965251592,31.3759947284936,19.4689515681309,53.8730234768173,34.3363238883857,13.3943061969848,28.6200924005605,19.6481868873683,22.9902104433473,19.6267721487831,24.4141804893858,37.2159650357763,19.3451717630123,21.9262035469765,36.2184719034622,25.4370231660754,36.6865795525569,37.829491695249,30.6874025398605,36.7022368977789,48.058798980059,34.9829631893504,32.8406540250514,23.1730351813367,17.2423097766859,19.8914449576915,29.8261112451123,33.5372265772968,32.2311090015217,39.7731155783153,37.5819682637541,34.4015661738853,35.5776935468124,42.3871974211398,56.1641296786085,43.4438003771588,45.6385550139885,51.3165564425267,47.953595875509,38.860370406516,41.0671641406738,32.1743621303115,14.3037411207205,22.7988960258821,13.4869788998408,27.3008960685099,25.5460339046482,22.4229382700442,24.2020229548011,17.5678654637448,21.6857213768317,24.6755112003146,23.3872515708095,26.6415321328286,20.4925166202385,25.930223586843,19.7740269903929,18.8040103390984,26.0875067963221,24.6568271239006,24.449181698482,40.574784842309,30.3440478489518,32.1961128698259,45.3077396491458,52.8025084987548,45.3163154297379,35.4817124921507,29.4919221773103,26.3842838107563,10.67808676583,11.9900987019054,13.2668646307064,15.2145091041377,14.470629585145,14.7682994033223,23.8787794084173,24.1581487894803,20.8666674022942,27.3159592401974,25.6777253891267,27.7713529071959,18.6908369680863,15.2487801493625,24.6046195895317,92.3765950833023,21.2230381182943,32.7559602648472,26.4802333809293,32.6219445121018,47.7392833709175,53.5598191993531,80.7853302131287,85.2806129614493,89.0288052388075,89.2946704481928,87.9946000023513,78.3989817671166,87.657329500396,27.142431109069,21.7562273527484,13.277635371514,19.591508987636,25.8486449880345,22.2702204525186,25.4099165333847,31.5588659005466,53.6363973007636,52.3187917357496,50.8399218649405,39.6688204601236,39.8809626607485,39.6307143104365,64.7697122679831,46.7609372658099,54.5497133566202,19.6006003017302,36.478601898525,35.2569895261165,50.6578443589622,42.397321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| ||
|EntrezGene=50523 | |||
|HGNC= | |||
|UniProt=Q7TSJ6,G3UY78,G3UZ29,G3UXG3 | |||
|association_with_transcript=0bp_to_ENSMUST00000022531,ENSMUST00000173990,ENSMUST00000174213,ENSMUST00000174694,NM_015771,uc007udj.1,uc007udk.1,uc007udl.1,uc011zmg.1_5end | |||
|description=CAGE_peak_1_at_Lats2_5end | |||
|id=chr14:58364881..58364981,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.10e-09!33;UBERON:0004535!4.44e-08!23;UBERON:0001009!4.44e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.10e-09,33;UBERON:0004535,4.44e-08,23;UBERON:0001009,4.44e-08,23;UBERON:0000926,5.38e-07,120;UBERON:0004120,5.38e-07,120;UBERON:0006603,5.38e-07,120 | |||
|phase1_expression=24.0223270657191,56.8829914452159,52.3249125297966,42.0425253716494,38.0680754759224,11.2479112180966,10.2789561862031,51.3910827297474,56.8786437492734,43.7700664222128,5.99262888789267,4.46724090373884,49.134609490256,48.6057437449626,24.9832321361747,24.7019826215588,32.1798463938947,59.4646181700278,63.8953260602743,77.2389166272415,59.6153463958999,13.2056965097177,8.35839325244593,15.9992422793407,15.8292403936347,36.1766137392463,24.1226717849082,17.8841123129288,19.0023419456374,15.6258680451157,10.4213340007993,0,0,0,0.288851619751275,0.831173226792462,1.42918549383658,115.933261714123,66.413504284523,102.610653818864,98.2346585011794,101.773777258808,107.297788019885,88.1277725829041,91.3406150287826,79.1086501816848,71.1976123356716,119.477785696485,106.987170991688,124.629565306616,69.2932787045544,86.2515386189829,103.857433149739,79.7898356212479,62.1773528413558,74.0907175783527,70.2006927849954,105.712778916876,11.7343547298567,7.93486468908049,3.1691570175309,46.082856361402,33.7932022522233,20.6976934974722,15.8218618010716,23.4458437932213,30.5592112728773,27.2794996778304,9.64313394468842,11.340498819862,10.3059231062177,12.2829923293636,12.1477697523387,8.57435594504678,10.4471563409878,9.19218786610021,15.4162233399144,23.7498448838449,27.0347498530989,7.38563211289086,6.40413505216868,3.12548022334056,20.1011759280994,19.1339287410771,25.3645091309505,15.9099436155781,9.681274294339,8.20157561631323,38.6203585999239,35.3674901299756,115.076202014566,36.1378028332182,30.5987100168488,12.9528765993076,16.8941868536394,15.2329141613094,27.8079951860869,31.3591793543626,20.2633083590238,23.6737514921928,27.0419365971227,100.094652383168,109.566253073858,213.320010945999,24.8964697162896,26.3494260094103,39.4309067111531,27.0615794934172,42.7247508017833,39.1887247131137,18.0424739836781,21.9215144384742,24.9064737036543,21.7040602395776,41.2736362046324,30.1599819191221,41.0343646439061,58.1289414818045,42.461306493594,41.897614136379,34.6721183982818,27.6378894287077,22.3670113461747,50.6510778829977,32.673686262899,17.1156226989756,28.9952601304327,19.196887391789,24.2704133709554,30.7070810779887,23.33253074375,4.77486538028885,17.5562563394199,14.8314965251592,31.3759947284936,19.4689515681309,53.8730234768173,34.3363238883857,13.3943061969848,28.6200924005605,19.6481868873683,22.9902104433473,19.6267721487831,24.4141804893858,37.2159650357763,19.3451717630123,21.9262035469765,36.2184719034622,25.4370231660754,36.6865795525569,37.829491695249,30.6874025398605,36.7022368977789,48.058798980059,34.9829631893504,32.8406540250514,23.1730351813367,17.2423097766859,19.8914449576915,29.8261112451123,33.5372265772968,32.2311090015217,39.7731155783153,37.5819682637541,34.4015661738853,35.5776935468124,42.3871974211398,56.1641296786085,43.4438003771588,45.6385550139885,51.3165564425267,47.953595875509,38.860370406516,41.0671641406738,32.1743621303115,14.3037411207205,22.7988960258821,13.4869788998408,27.3008960685099,25.5460339046482,22.4229382700442,24.2020229548011,17.5678654637448,21.6857213768317,24.6755112003146,23.3872515708095,26.6415321328286,20.4925166202385,25.930223586843,19.7740269903929,18.8040103390984,26.0875067963221,24.6568271239006,24.449181698482,40.574784842309,30.3440478489518,32.1961128698259,45.3077396491458,52.8025084987548,45.3163154297379,35.4817124921507,29.4919221773103,26.3842838107563,10.67808676583,11.9900987019054,13.2668646307064,15.2145091041377,14.470629585145,14.7682994033223,23.8787794084173,24.1581487894803,20.8666674022942,27.3159592401974,25.6777253891267,27.7713529071959,18.6908369680863,15.2487801493625,24.6046195895317,92.3765950833023,21.2230381182943,32.7559602648472,26.4802333809293,32.6219445121018,47.7392833709175,53.5598191993531,80.7853302131287,85.2806129614493,89.0288052388075,89.2946704481928,87.9946000023513,78.3989817671166,87.657329500396,27.142431109069,21.7562273527484,13.277635371514,19.591508987636,25.8486449880345,22.2702204525186,25.4099165333847,31.5588659005466,53.6363973007636,52.3187917357496,50.8399218649405,39.6688204601236,39.8809626607485,39.6307143104365,64.7697122679831,46.7609372658099,54.5497133566202,19.6006003017302,36.478601898525,35.2569895261165,50.6578443589622,42.3973216039416,18.5843193675948,17.7229864393136,16.9301191900261,13.7681708221806,14.4697927511579,24.9022469834581,34.1125346982052,22.5390912276053,26.0243086220847,22.4386098134429,18.9753495434998,37.1287955693473,6.46835250932197,19.0864759673189,16.4285528404098,18.0043109426538,19.6847659342924,21.2258892946464,22.5432158224906,17.6589670486468,35.9047713337477,56.3473308497762,16.3191014560672,39.9024732118382,42.6266086477191,41.2540406508586,43.4515332171417,37.7524069413641,30.3140070095045,26.7012434895134,33.3198217555813,52.6286513306217,42.0391577129245,30.7040584917646,29.5259531877414,39.1210676183154,27.3665272290107,27.8503390124079,31.6477940012131,16.2294005062569,23.408863525004,26.4315307264903,20.3050040744986,21.1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| |||
|short_description=p1@Lats2 | |||
}} | |||
Revision as of 02:37, 13 September 2013
| Short description: | p1@Lats2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Lats2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000022531, ENSMUST00000173990, ENSMUST00000174213, ENSMUST00000174694, NM_015771, uc007udj.1, uc007udk.1, uc007udl.1, uc011zmg.1_5end |
| EntrezGene: | Lats2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| splanchnic layer of lateral plate mesoderm | 1.10e-09 | 33 |
| cardiovascular system | 4.44e-08 | 23 |
| circulatory system | 4.44e-08 | 23 |
| mesoderm | 5.38e-07 | 120 |
| mesoderm-derived structure | 5.38e-07 | 120 |
| presumptive mesoderm | 5.38e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
