FFCP PHASE1:Mm9::chr14:54873518..54873579,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13135|HGNC=|MCL_coexpression_id=1665|UniProt=P61804|association_with_transcript=9bp_to_ENSMUST00000128231_5end|description=CAGE_peak_1_at_Dad1_5end|id=chr14:54873518..54873579,-|ontology_enrichment_celltype=CL:0000219!2.83e-07!54;CL:0000063!9.26e-07!66|ontology_enrichment_celltype_v019_2=CL:0000219,2.83e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.40e-09!51;UBERON:0000160!1.20e-08!43;UBERON:0002100!2.52e-07!98;UBERON:0002108!2.99e-07!16;UBERON:0000466!3.24e-07!79;UBERON:0005177!4.84e-07!85;UBERON:0000926!6.76e-07!193;UBERON:0004120!6.76e-07!193;UBERON:0006603!6.76e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.40e-09,51;UBERON:0005177,6.00e-08,79;UBERON:0002100,7.10e-08,90|phase1_expression=291.150604036515,393.29528440956,351.259412808722,129.75714665063,173.810818291382,242.585547912681,324.487957787185,263.282456497374,426.871405563854,369.119758009784,692.063027567491,475.681384089191,409.854547455306,259.201493172327,220.851772083784,237.301013380876,221.761115366622,304.26325848802,271.212349672151,326.780031884483,310.748182212009,307.504075869142,360.455709011731,546.374123839484,583.387801753813,617.299361423647,516.483633394731,490.197054360398,482.089415160821,399.21572553973,905.103944494954,219.720613017032,275.549024837887,285.26702582779,327.557736797945,448.002369241137,356.275526677834,104.21437605349,228.931255945474,109.939986234498,79.9994823722179,84.0145946498888,83.9932910743896,342.187551257619,358.570205723423,392.790049625999,391.19567217402,312.866099405941,365.99718043563,335.00271610499,250.85566755265,303.31791081009,431.201297568382,349.624552449468,321.97785957848,435.282965772822,244.699557707698,346.531646010441,185.92882752997,201.016572123372,200.924554911459,370.357073551561,375.282403958901,328.01344694907,397.524277751924,372.291580231756,353.528130411718,389.597361596056,109.703609822369,111.379899123645,129.770501153803,263.941509589115,280.061309926646,135.352333132524,113.481037685592,147.075005857603,179.488886029004,187.572699647141,197.230788701017,183.98137138362,176.845615083458,179.715112842082,261.315287065293,308.393910297361,226.294204957456,220.08755334883,244.45217593206,218.646549953078,392.564586239226,346.646746209825,288.994895235573,476.674827847688,474.61999092801,474.938808641279,595.195198382065,442.20253756507,315.999945296442,435.960765154672,462.419088193106,444.501184734008,407.037483154607,136.026066059177,43.3168907501298,49.7746692207332,478.445200634783,475.04974776581,414.530044912122,296.307167870961,340.244379112384,676.005501301212,339.510784481328,492.625143909044,582.304130571548,543.958009754415,374.284854812948,487.460707767811,275.127999088358,270.256198083315,264.498555033012,275.488945460438,213.11206531428,227.891368973554,510.713425737655,197.919818779806,165.253451675816,535.948901827625,272.699223375475,475.122962946779,297.217261123898,282.205564638686,277.702865910906,186.848021591829,294.979871366293,226.819610652003,295.682387408254,252.934129122634,279.549053769118,291.361125168838,779.90243252632,317.977644244462,185.29151077889,226.223670762537,263.791020164837,219.878329222308,160.566137997134,184.739984650753,195.930306054393,241.628948270241,186.897449872774,191.753565290169,207.62232651346,304.024480877046,251.632760549166,261.885629224669,265.870520239063,280.439281947257,402.368156330484,482.269977932976,358.898499736633,331.401236056803,355.07245481138,337.07617905502,308.004900996359,299.278396487801,332.137094046525,303.224263954532,291.076640518587,253.030496909656,303.612923090371,284.502215249072,244.260323161663,231.580780081726,318.786767402606,266.399741239338,318.799562023217,208.48474468043,554.442717846813,582.320147793125,243.575182111237,211.79984473672,251.935886884692,309.987577346077,347.799260573377,394.527948557448,399.078940758934,418.335344998988,293.559523878715,324.498005899117,321.105851485191,423.343941476138,420.172368956406,360.843987136913,315.607387185928,239.236385404772,245.702863767315,279.613273131616,268.430242239994,244.35319649787,270.589142354697,331.975222806125,386.687866673306,379.816470551302,490.332645202144,249.266587939845,277.541301099843,267.585913737976,263.109577440888,305.33028424656,353.675308124392,376.30654778566,228.6106697528,370.383346390722,139.455160331534,347.207504174714,352.290532946339,394.023049597494,435.935714858247,393.673913432508,362.855265487212,245.959852478089,259.114312542821,239.680061114566,249.945114427255,246.904223469236,326.119788013839,225.964764219331,258.048730901835,298.3129369569,263.738187359484,297.248052894349,312.905187141003,287.851626577208,220.155274551337,325.799504607407,684.044103769479,431.841007966906,324.793843545303,282.48016468721,175.082521662289,218.639822958987,204.449326181734,214.741309363151,183.109888072879,173.2523785156,175.788153851009,140.972112332839,180.545572947003,193.181122079377,157.324535622716,249.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| ||
|EntrezGene=13135 | |||
|HGNC= | |||
|MCL_coexpression_id=1665 | |||
|UniProt=P61804 | |||
|association_with_transcript=9bp_to_ENSMUST00000128231_5end | |||
|description=CAGE_peak_1_at_Dad1_5end | |||
|id=chr14:54873518..54873579,- | |||
|ontology_enrichment_celltype=CL:0000219!2.83e-07!54;CL:0000063!9.26e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.83e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.40e-09!51;UBERON:0000160!1.20e-08!43;UBERON:0002100!2.52e-07!98;UBERON:0002108!2.99e-07!16;UBERON:0000466!3.24e-07!79;UBERON:0005177!4.84e-07!85;UBERON:0000926!6.76e-07!193;UBERON:0004120!6.76e-07!193;UBERON:0006603!6.76e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.40e-09,51;UBERON:0005177,6.00e-08,79;UBERON:0002100,7.10e-08,90 | |||
|phase1_expression=291.150604036515,393.29528440956,351.259412808722,129.75714665063,173.810818291382,242.585547912681,324.487957787185,263.282456497374,426.871405563854,369.119758009784,692.063027567491,475.681384089191,409.854547455306,259.201493172327,220.851772083784,237.301013380876,221.761115366622,304.26325848802,271.212349672151,326.780031884483,310.748182212009,307.504075869142,360.455709011731,546.374123839484,583.387801753813,617.299361423647,516.483633394731,490.197054360398,482.089415160821,399.21572553973,905.103944494954,219.720613017032,275.549024837887,285.26702582779,327.557736797945,448.002369241137,356.275526677834,104.21437605349,228.931255945474,109.939986234498,79.9994823722179,84.0145946498888,83.9932910743896,342.187551257619,358.570205723423,392.790049625999,391.19567217402,312.866099405941,365.99718043563,335.00271610499,250.85566755265,303.31791081009,431.201297568382,349.624552449468,321.97785957848,435.282965772822,244.699557707698,346.531646010441,185.92882752997,201.016572123372,200.924554911459,370.357073551561,375.282403958901,328.01344694907,397.524277751924,372.291580231756,353.528130411718,389.597361596056,109.703609822369,111.379899123645,129.770501153803,263.941509589115,280.061309926646,135.352333132524,113.481037685592,147.075005857603,179.488886029004,187.572699647141,197.230788701017,183.98137138362,176.845615083458,179.715112842082,261.315287065293,308.393910297361,226.294204957456,220.08755334883,244.45217593206,218.646549953078,392.564586239226,346.646746209825,288.994895235573,476.674827847688,474.61999092801,474.938808641279,595.195198382065,442.20253756507,315.999945296442,435.960765154672,462.419088193106,444.501184734008,407.037483154607,136.026066059177,43.3168907501298,49.7746692207332,478.445200634783,475.04974776581,414.530044912122,296.307167870961,340.244379112384,676.005501301212,339.510784481328,492.625143909044,582.304130571548,543.958009754415,374.284854812948,487.460707767811,275.127999088358,270.256198083315,264.498555033012,275.488945460438,213.11206531428,227.891368973554,510.713425737655,197.919818779806,165.253451675816,535.948901827625,272.699223375475,475.122962946779,297.217261123898,282.205564638686,277.702865910906,186.848021591829,294.979871366293,226.819610652003,295.682387408254,252.934129122634,279.549053769118,291.361125168838,779.90243252632,317.977644244462,185.29151077889,226.223670762537,263.791020164837,219.878329222308,160.566137997134,184.739984650753,195.930306054393,241.628948270241,186.897449872774,191.753565290169,207.62232651346,304.024480877046,251.632760549166,261.885629224669,265.870520239063,280.439281947257,402.368156330484,482.269977932976,358.898499736633,331.401236056803,355.07245481138,337.07617905502,308.004900996359,299.278396487801,332.137094046525,303.224263954532,291.076640518587,253.030496909656,303.612923090371,284.502215249072,244.260323161663,231.580780081726,318.786767402606,266.399741239338,318.799562023217,208.48474468043,554.442717846813,582.320147793125,243.575182111237,211.79984473672,251.935886884692,309.987577346077,347.799260573377,394.527948557448,399.078940758934,418.335344998988,293.559523878715,324.498005899117,321.105851485191,423.343941476138,420.172368956406,360.843987136913,315.607387185928,239.236385404772,245.702863767315,279.613273131616,268.430242239994,244.35319649787,270.589142354697,331.975222806125,386.687866673306,379.816470551302,490.332645202144,249.266587939845,277.541301099843,267.585913737976,263.109577440888,305.33028424656,353.675308124392,376.30654778566,228.6106697528,370.383346390722,139.455160331534,347.207504174714,352.290532946339,394.023049597494,435.935714858247,393.673913432508,362.855265487212,245.959852478089,259.114312542821,239.680061114566,249.945114427255,246.904223469236,326.119788013839,225.964764219331,258.048730901835,298.3129369569,263.738187359484,297.248052894349,312.905187141003,287.851626577208,220.155274551337,325.799504607407,684.044103769479,431.841007966906,324.793843545303,282.48016468721,175.082521662289,218.639822958987,204.449326181734,214.741309363151,183.109888072879,173.2523785156,175.788153851009,140.972112332839,180.545572947003,193.181122079377,157.324535622716,249.345341543322,358.540655236087,330.489760406426,237.977847615575,331.589947174796,618.592344664227,310.759214278376,341.020972256239,692.93506302317,954.711019683538,700.337267016267,269.023853188118,353.354785052135,362.914331195646,656.092309474754,782.206075626491,672.443741978178,614.833927991341,192.665370613502,285.235897740974,277.780797400944,300.059675322727,303.405358741122,358.058668830215,579.092333215968,475.444880537077,542.29010141138,818.380885181964,152.354897717928,168.730325897221,186.728815577571,163.062621908284,157.411122855514,366.974373316982,309.845679659562,281.766082435659,252.617526386984,226.492906973157,212.479619501291,229.37291411588,202.239905114566,221.311915852,219.303925791172,220.56715819186,692.136198060957,226.022067413721,256.9958064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| |||
|short_description=p1@Dad1 | |||
}} | |||
Revision as of 02:24, 13 September 2013
| Short description: | p1@Dad1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Dad1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1665 |
| Association with transcript: | 9bp_to_ENSMUST00000128231_5end |
| EntrezGene: | Dad1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| motile cell | 2.83e-07 | 54 |
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 9.40e-09 | 51 |
| trunk region element | 6.00e-08 | 79 |
| trunk | 7.10e-08 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
