FFCP PHASE1:Mm9::chr14:27928033..27928080,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=71704|HGNC=|UniProt=Q91X46|association_with_transcript=-4bp_to_uc007sto.1_5end|description=CAGE_peak_3_at_Arhgef3_5end|id=chr14:27928033..27928080,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!7.62e-07!79|ontology_enrichment_uberon_v019_2=|phase1_expression=1.92178616525753,21.9854506812797,22.7499619694768,8.16653370528441,12.0214975187123,11.0800319461847,9.81173090501208,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.137114433605739,0.42438965179803,5.6128571499706,0,0,6.71968175732308,7.57050627521661,14.3557991028755,16.3689558540448,14.4365725899546,9.88121781173144,6.04872311423834,8.86922042621219,0,0,0,0.577703239502549,1.66234645358492,0.612508068787107,0,0,0,0,0,0,3.77690453926732,4.56196190487815,4.77221555620372,0,0.65407546914134,0.439372365468944,0,0.419959264876088,1.43752564364972,0,0,0,6.17422646486273,14.8997388768154,10.3134418455488,0.202316460859598,1.05798195854407,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0,0.299600110518405,0,0.207379224616955,0,0.210324961351382,1.99955689082663,1.98781686856452,0.857435594504678,0.191690942036473,1.83843757322004,0,0.383062014255563,0.307213066512487,0,0.182975287204819,0.52091337055676,0,0,0.45839474333043,4.12480019663135,3.13217697758026,0.559198337475902,1.21161909333094,1.20914496170857,30.7256358023778,4.30211938490693,11.5595126730318,4.85732872474035,6.49776417447669,9.85659151614138,3.7919993435573,3.06774580640504,3.37721805983729,3.18005617059306,3.09855523508697,5.13305909657271,2.54805239706646,0,2.59789249213457,2.78695852022608,2.02209778005913,6.50848114398642,7.76813650941515,14.1020032111584,2.77576522825817,7.00270600117925,7.84092690670599,7.68685466818375,14.4634109776917,10.8073268543521,15.8204779349999,8.96516012903452,3.5384422077995,5.66183974815932,2.65009822152472,0.484875253135222,13.0474232852686,0.292780797011547,0.628340120440365,8.17462576667492,0.359445373517761,1.19980546198682,0.127070227073065,0.599162557619291,0,1.38219787324151,0.695297280769106,0.255715457330331,0.20778804455956,1.62241263067758,10.1839363850316,3.73220911830279,4.29628689337247,2.52530227063769,0.390361328888111,0.459804208866946,1.62055916824814,2.41127708537144,2.85753296435577,2.8185018462667,3.46696380870997,2.58703370739016,0.646703978798527,1.70195472151037,3.16712023495108,2.6303487891309,3.89266148915837,4.87553033131033,6.58502836505419,3.98068533636986,0.702213187313235,0.257347907114715,0.284163499395593,4.55676699578104,4.45599513964083,3.6012412292203,5.68187365404505,7.67380503814875,6.01641740260775,8.60375595576509,8.85302224618743,10.0418194435766,8.22799249567402,9.02921052435024,11.5117709555115,11.5497990066013,10.9775057645525,11.541752013392,0.630869845692382,2.05809224758569,14.5384264512871,4.7601101999438,1.49301775374664,2.09013004674395,4.12375876230699,4.23535401709019,3.11329261382818,4.94586627892654,7.11793592316767,4.77626968699632,2.76468729680296,4.17808591286417,4.67913809085888,8.98819408654222,5.61958929674205,9.75792238946399,0.948339504765408,2.05647322697512,1.1270773567308,3.25842124552503,2.32742984601151,3.7873342740772,6.38689024954999,12.6944727262458,17.583857518234,14.9310568345379,9.19003143970162,0.166845105716094,0.196558995113203,0,0.608580364165509,1.20588579876208,1.78238096246994,2.30156909960649,2.7562988551756,1.37280706594041,10.0637744569148,5.95425516269605,9.04909252032226,10.3557339958316,9.14926808961752,7.23665282045051,12.3784637411625,0.568474235311454,0.162964976442026,1.52770577197669,3.52035372432753,5.86271901046355,9.99783291721258,10.1469496886055,11.0344600874334,6.2010113101657,8.13219320153184,13.2729284919748,10.8791538575514,10.4147322178688,0,0,8.85175691434265,5.24279817978992,0.160550589987792,1.40654023910644,1.3114795630134,6.81671503451807,6.62567260774139,10.9322848403059,17.2338718186239,4.54040716109849,4.23317480756549,6.51076020814315,8.09621403349789,8.18316402151673,7.90575555893047,0.642642632843614,11.4971469018698,3.02711526234334,7.32991317091092,8.08353602565424,3.98235415019888,2.42780636154981,2.41858845571801,6.41257271170054,4.13422650033082,7.99331384654211,7.75284879504663,7.99774204850512,6.41695281092498,4.74055136903724,9.48767477174989,5.15677716240934,13.6175842301515,0.18006109403131,0.388076051348264,1.07168517515796,1.77340233642274,1.96205699362278,5.92376474167636,6.39376393140658,1.40803024838226,0.847328283455281,23.155481795771,9.56340267060584,9.84933002845024,7.84068024066026,8.47543642422269,7.71462228801788,4.08073171281791,2.03967832211561,0.683483523191411,1.44470807574256,1.29636169158798,0.565105371014073,0.683471138605126,1.14389086603261,0.679913719975421,1.11961161858926,0.138199973804424,5.72802370809068,0.790839983952838,4.06638934253697,4.86024033698106,8.57262013659322,6.98760203987768,6.20375993370175,7.3561575595549,7.0674104335688,13.4799572223465,4.34937519160848,3.38215763210514,6.13017838780313,5.29467169462712,15.9449974442119,15.4991788173277,22.9780330667458,24.0582339223796,28.3845558959811,32.6112561163961,10.1465330746923,6.04863013141517,1.26404448251271,1.01362607645082,1.33524244314275,1.94881234466693,0.716106782669926,0.79472541912506,1.20195449519969,0.295379054349154,1.51449674922221,0.533447646584999,1.00826185136841,1.8516997340553,1.25075394132428,0.584384510907845,17.0047787711409,3.99574716073316,0.448569283047378,2.18250001273302,11.3981860478992,3.37828455812128,7.14291334642334,8.57473516316263,11.5361583928134,0.564751842617067,0.920650473014354,1.71868654031819,1.03111909406213,0,0,0,0,0,0.51776031175182,0.31136204275253,0.798049746802062,1.19513524027894,3.8897074730927,1.46729213839588,2.20612210140017,4.22268782823069,5.35691148821125,6.09746498224449,7.07552192938633,5.57654459758527,5.09291121742406,4.49479235855436,5.25006249719928,5.74354689556133,4.28664322154766,5.79421629724277,5.20854895252004,4.12085900803307,5.7407578852415,3.77156177623957,6.56660482789549,3.33810665926249,6.1045494985578,5.36423468367385,5.58456412085065,5.3049112133104,4.20911538300549,5.16055632614275,4.48913817326191,5.45721083371201,4.13718825977367,4.09231043169689,5.57772628269478,5.40138510747196,3.2475375131933,3.04111090979031,6.23126056740065,8.99055160723564,6.39715115446595,3.94175320554716|short_description=p3@Arhgef3}} | ||
|EntrezGene=71704 | |||
|HGNC= | |||
|UniProt=Q91X46 | |||
|association_with_transcript=-4bp_to_uc007sto.1_5end | |||
|description=CAGE_peak_3_at_Arhgef3_5end | |||
|id=chr14:27928033..27928080,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!7.62e-07!79 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=1.92178616525753,21.9854506812797,22.7499619694768,8.16653370528441,12.0214975187123,11.0800319461847,9.81173090501208,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.137114433605739,0.42438965179803,5.6128571499706,0,0,6.71968175732308,7.57050627521661,14.3557991028755,16.3689558540448,14.4365725899546,9.88121781173144,6.04872311423834,8.86922042621219,0,0,0,0.577703239502549,1.66234645358492,0.612508068787107,0,0,0,0,0,0,3.77690453926732,4.56196190487815,4.77221555620372,0,0.65407546914134,0.439372365468944,0,0.419959264876088,1.43752564364972,0,0,0,6.17422646486273,14.8997388768154,10.3134418455488,0.202316460859598,1.05798195854407,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0,0.299600110518405,0,0.207379224616955,0,0.210324961351382,1.99955689082663,1.98781686856452,0.857435594504678,0.191690942036473,1.83843757322004,0,0.383062014255563,0.307213066512487,0,0.182975287204819,0.52091337055676,0,0,0.45839474333043,4.12480019663135,3.13217697758026,0.559198337475902,1.21161909333094,1.20914496170857,30.7256358023778,4.30211938490693,11.5595126730318,4.85732872474035,6.49776417447669,9.85659151614138,3.7919993435573,3.06774580640504,3.37721805983729,3.18005617059306,3.09855523508697,5.13305909657271,2.54805239706646,0,2.59789249213457,2.78695852022608,2.02209778005913,6.50848114398642,7.76813650941515,14.1020032111584,2.77576522825817,7.00270600117925,7.84092690670599,7.68685466818375,14.4634109776917,10.8073268543521,15.8204779349999,8.96516012903452,3.5384422077995,5.66183974815932,2.65009822152472,0.484875253135222,13.0474232852686,0.292780797011547,0.628340120440365,8.17462576667492,0.359445373517761,1.19980546198682,0.127070227073065,0.599162557619291,0,1.38219787324151,0.695297280769106,0.255715457330331,0.20778804455956,1.62241263067758,10.1839363850316,3.73220911830279,4.29628689337247,2.52530227063769,0.390361328888111,0.459804208866946,1.62055916824814,2.41127708537144,2.85753296435577,2.8185018462667,3.46696380870997,2.58703370739016,0.646703978798527,1.70195472151037,3.16712023495108,2.6303487891309,3.89266148915837,4.87553033131033,6.58502836505419,3.98068533636986,0.702213187313235,0.257347907114715,0.284163499395593,4.55676699578104,4.45599513964083,3.6012412292203,5.68187365404505,7.67380503814875,6.01641740260775,8.60375595576509,8.85302224618743,10.0418194435766,8.22799249567402,9.02921052435024,11.5117709555115,11.5497990066013,10.9775057645525,11.541752013392,0.630869845692382,2.05809224758569,14.5384264512871,4.7601101999438,1.49301775374664,2.09013004674395,4.12375876230699,4.23535401709019,3.11329261382818,4.94586627892654,7.11793592316767,4.77626968699632,2.76468729680296,4.17808591286417,4.67913809085888,8.98819408654222,5.61958929674205,9.75792238946399,0.948339504765408,2.05647322697512,1.1270773567308,3.25842124552503,2.32742984601151,3.7873342740772,6.38689024954999,12.6944727262458,17.583857518234,14.9310568345379,9.19003143970162,0.166845105716094,0.196558995113203,0,0.608580364165509,1.20588579876208,1.78238096246994,2.30156909960649,2.7562988551756,1.37280706594041,10.0637744569148,5.95425516269605,9.04909252032226,10.3557339958316,9.14926808961752,7.23665282045051,12.3784637411625,0.568474235311454,0.162964976442026,1.52770577197669,3.52035372432753,5.86271901046355,9.99783291721258,10.1469496886055,11.0344600874334,6.2010113101657,8.13219320153184,13.2729284919748,10.8791538575514,10.4147322178688,0,0,8.85175691434265,5.24279817978992,0.160550589987792,1.40654023910644,1.3114795630134,6.81671503451807,6.62567260774139,10.9322848403059,17.2338718186239,4.54040716109849,4.23317480756549,6.51076020814315,8.09621403349789,8.18316402151673,7.90575555893047,0.642642632843614,11.4971469018698,3.02711526234334,7.32991317091092,8.08353602565424,3.98235415019888,2.42780636154981,2.41858845571801,6.41257271170054,4.13422650033082,7.99331384654211,7.75284879504663,7.99774204850512,6.41695281092498,4.74055136903724,9.48767477174989,5.15677716240934,13.6175842301515,0.18006109403131,0.388076051348264,1.07168517515796,1.77340233642274,1.96205699362278,5.92376474167636,6.39376393140658,1.40803024838226,0.847328283455281,23.155481795771,9.56340267060584,9.84933002845024,7.84068024066026,8.47543642422269,7.71462228801788,4.08073171281791,2.03967832211561,0.683483523191411,1.44470807574256,1.29636169158798,0.565105371014073,0.683471138605126,1.14389086603261,0.679913719975421,1.11961161858926,0.138199973804424,5.72802370809068,0.790839983952838,4.06638934253697,4.86024033698106,8.57262013659322,6.98760203987768,6.20375993370175,7.3561575595549,7.0674104335688,13.4799572223465,4.34937519160848,3.38215763210514,6.13017838780313,5.29467169462712,15.9449974442119,15.4991788173277,22.9780330667458,24.0582339223796,28.3845558959811,32.6112561163961,10.1465330746923,6.04863013141517,1.26404448251271,1.01362607645082,1.33524244314275,1.94881234466693,0.716106782669926,0.79472541912506,1.20195449519969,0.295379054349154,1.51449674922221,0.533447646584999,1.00826185136841,1.8516997340553,1.25075394132428,0.584384510907845,17.0047787711409,3.99574716073316,0.448569283047378,2.18250001273302,11.3981860478992,3.37828455812128,7.14291334642334,8.57473516316263,11.5361583928134,0.564751842617067,0.920650473014354,1.71868654031819,1.03111909406213,0,0,0,0,0,0.51776031175182,0.31136204275253,0.798049746802062,1.19513524027894,3.8897074730927,1.46729213839588,2.20612210140017,4.22268782823069,5.35691148821125,6.09746498224449,7.07552192938633,5.57654459758527,5.09291121742406,4.49479235855436,5.25006249719928,5.74354689556133,4.28664322154766,5.79421629724277,5.20854895252004,4.12085900803307,5.7407578852415,3.77156177623957,6.56660482789549,3.33810665926249,6.1045494985578,5.36423468367385,5.58456412085065,5.3049112133104,4.20911538300549,5.16055632614275,4.48913817326191,5.45721083371201,4.13718825977367,4.09231043169689,5.57772628269478,5.40138510747196,3.2475375131933,3.04111090979031,6.23126056740065,8.99055160723564,6.39715115446595,3.94175320554716 | |||
|short_description=p3@Arhgef3 | |||
}} | |||
Revision as of 01:52, 13 September 2013
| Short description: | p3@Arhgef3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Arhgef3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -4bp_to_uc007sto.1_5end |
| EntrezGene: | Arhgef3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
