FFCP PHASE1:Hg19::chr3:98700139..98700150,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=237bp_to_ENST00000473756_5end|coexpression_cluster_id=C1081|description=CAGE_peak_6_at_ENST00000473756_5end|id=chr3:98700139..98700150,+|ontology_enrichment_celltype=CL:0000548!1.68e-10!679;CL:0000004!1.68e-10!679;CL:0000255!1.68e-10!679;CL:0000012!2.84e-10!682;CL:0000183!3.64e-08!59;CL:0000680!5.22e-08!57;CL:0000056!5.22e-08!57;CL:0000355!5.22e-08!57;CL:0000066!5.45e-08!254;CL:0000220!1.06e-07!246;CL:0002321!1.65e-07!248;CL:0000003!2.05e-07!722;CL:1000497!2.23e-07!18;CL:0002518!2.23e-07!18;CL:0000187!4.87e-07!54;CL:0000144!8.30e-07!625|ontology_enrichment_celltype_v019=CL:0002166;1.38e-10;3!CL:0000064;5.16e-10;3!CL:0000067;5.16e-10;3!CL:0005012;5.16e-10;3!CL:0002304;5.16e-10;3!CL:1000497;2.45e-08;17!CL:0002518;2.45e-08;17!CL:1000507;4.65e-08;10!CL:1000494;4.65e-08;10!CL:0000056;2.40e-07;4!CL:1000449;3.23e-07;15|ontology_enrichment_celltype_v019_2=CL:0002166,7.28e-11,3;CL:0000064,6.99e-10,3;CL:0000067,6.99e-10,3;CL:0005012,6.99e-10,3;CL:0002304,6.99e-10,3;CL:0000066,1.74e-09,253;CL:1000497,2.73e-08,17;CL:0002518,2.73e-08,17;CL:1000507,5.65e-08,10;CL:1000494,5.65e-08,10;CL:1000449,3.58e-07,15;CL:0000515,3.69e-07,4|ontology_enrichment_development_v019=CL:0000515;2.40e-07;4|ontology_enrichment_disease=DOID:120!1.54e-12!27;DOID:193!2.76e-11!29;DOID:2394!1.14e-10!14|ontology_enrichment_disease_v019=DOID:4468;1.80e-07;2!DOID:0060072;2.40e-07;4|ontology_enrichment_disease_v019_2=DOID:0060072,1.60e-07,4;DOID:4468,2.87e-07,2|ontology_enrichment_uberon=UBERON:0000486!3.29e-12!82;UBERON:0005256!1.66e-11!143;UBERON:0003100!1.89e-09!41;UBERON:0004290!3.17e-09!70;UBERON:0000914!7.20e-09!83;UBERON:0002329!7.20e-09!83;UBERON:0003077!7.20e-09!83;UBERON:0003059!7.20e-09!83;UBERON:0007282!7.20e-09!83;UBERON:0009618!7.20e-09!83;UBERON:0007285!7.20e-09!83;UBERON:0007625!9.02e-09!11;UBERON:0000119!1.56e-08!312;UBERON:0000483!1.86e-08!309;UBERON:0003134!1.07e-07!37;UBERON:0000474!1.07e-07!37;UBERON:0002100!2.72e-07!216;UBERON:0001134!4.80e-07!61;UBERON:0002036!4.80e-07!61;UBERON:0003082!4.80e-07!61|ontology_enrichment_uberon_v019=UBERON:0000488;1.15e-12;4!UBERON:0001778;5.16e-10;3!UBERON:0001775;5.16e-10;3!UBERON:0007625;1.70e-09;11!UBERON:0002203;1.85e-08;6!UBERON:0001768;1.85e-08;6!UBERON:0002200;1.85e-08;6!UBERON:0004211;4.65e-08;10!UBERON:0009773;4.65e-08;10!UBERON:0001231;4.65e-08;10!UBERON:0004810;4.65e-08;10!UBERON:0001708;4.95e-08;4!UBERON:0008895;4.95e-08;4!UBERON:0001801;2.56e-07;14!UBERON:0006555;3.23e-07;15!UBERON:0004819;3.23e-07;15!UBERON:0001285;3.23e-07;15!UBERON:0007684;3.23e-07;15!UBERON:0006554;4.69e-07;30!UBERON:0001008;4.69e-07;30|ontology_enrichment_uberon_v019_2=UBERON:0000488,2.70e-12,4;UBERON:0001778,6.99e-10,3;UBERON:0001775,6.99e-10,3;UBERON:0007625,2.90e-09,11;UBERON:0001708,3.09e-08,4;UBERON:0008895,3.09e-08,4;UBERON:0002203,3.22e-08,6;UBERON:0001768,3.22e-08,6;UBERON:0002200,3.22e-08,6;UBERON:0004810,5.65e-08,10;UBERON:0004211,3.58e-07,15;UBERON:0009773,3.58e-07,15;UBERON:0001231,3.58e-07,15;UBERON:0001285,3.58e-07,15;UBERON:0007684,3.58e-07,15;UBERON:0004208,3.58e-07,15;UBERON:0001801,3.85e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,2.01697543935533,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32348744029695,2.21729397462564,1.31752178539689,0,0.364295288292542,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16395805171553,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,2.18196896472668,1.14721838155602,0,0,0,0,0,0,0,0,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0.878002283269004,0,0,0,0,0,0,1.507095264676,0.469634776943287,0,0,0,0,0,0,0,0,2.81201501960331,6.04735661515894,1.84307626415102,1.43293636324557,1.45316969256981,0.383382679165211,2.95597942737566,1.14462964217194,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,1.42636905040718,1.15825045334063,0,1.25342674267927,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.601892199455438,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0.887808626565635,0.739144404124282,0,0.116210378459959,0,1.60405176242628,0,0.114814448164607,0.182091168006717,0.131124414959424,1.80479845162965,10.7821471946181,0.784349769176855,0,10.4496112603947,0,0,1.511411412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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=237bp_to_ENST00000473756_5end | |||
|coexpression_cluster_id=C1081 | |||
|description=CAGE_peak_6_at_ENST00000473756_5end | |||
|id=chr3:98700139..98700150,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.68e-10!679;CL:0000004!1.68e-10!679;CL:0000255!1.68e-10!679;CL:0000012!2.84e-10!682;CL:0000183!3.64e-08!59;CL:0000680!5.22e-08!57;CL:0000056!5.22e-08!57;CL:0000355!5.22e-08!57;CL:0000066!5.45e-08!254;CL:0000220!1.06e-07!246;CL:0002321!1.65e-07!248;CL:0000003!2.05e-07!722;CL:1000497!2.23e-07!18;CL:0002518!2.23e-07!18;CL:0000187!4.87e-07!54;CL:0000144!8.30e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.38e-10;3!CL:0000064;5.16e-10;3!CL:0000067;5.16e-10;3!CL:0005012;5.16e-10;3!CL:0002304;5.16e-10;3!CL:1000497;2.45e-08;17!CL:0002518;2.45e-08;17!CL:1000507;4.65e-08;10!CL:1000494;4.65e-08;10!CL:0000056;2.40e-07;4!CL:1000449;3.23e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,7.28e-11,3;CL:0000064,6.99e-10,3;CL:0000067,6.99e-10,3;CL:0005012,6.99e-10,3;CL:0002304,6.99e-10,3;CL:0000066,1.74e-09,253;CL:1000497,2.73e-08,17;CL:0002518,2.73e-08,17;CL:1000507,5.65e-08,10;CL:1000494,5.65e-08,10;CL:1000449,3.58e-07,15;CL:0000515,3.69e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;2.40e-07;4 | |||
|ontology_enrichment_disease=DOID:120!1.54e-12!27;DOID:193!2.76e-11!29;DOID:2394!1.14e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.80e-07;2!DOID:0060072;2.40e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,1.60e-07,4;DOID:4468,2.87e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000486!3.29e-12!82;UBERON:0005256!1.66e-11!143;UBERON:0003100!1.89e-09!41;UBERON:0004290!3.17e-09!70;UBERON:0000914!7.20e-09!83;UBERON:0002329!7.20e-09!83;UBERON:0003077!7.20e-09!83;UBERON:0003059!7.20e-09!83;UBERON:0007282!7.20e-09!83;UBERON:0009618!7.20e-09!83;UBERON:0007285!7.20e-09!83;UBERON:0007625!9.02e-09!11;UBERON:0000119!1.56e-08!312;UBERON:0000483!1.86e-08!309;UBERON:0003134!1.07e-07!37;UBERON:0000474!1.07e-07!37;UBERON:0002100!2.72e-07!216;UBERON:0001134!4.80e-07!61;UBERON:0002036!4.80e-07!61;UBERON:0003082!4.80e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;1.15e-12;4!UBERON:0001778;5.16e-10;3!UBERON:0001775;5.16e-10;3!UBERON:0007625;1.70e-09;11!UBERON:0002203;1.85e-08;6!UBERON:0001768;1.85e-08;6!UBERON:0002200;1.85e-08;6!UBERON:0004211;4.65e-08;10!UBERON:0009773;4.65e-08;10!UBERON:0001231;4.65e-08;10!UBERON:0004810;4.65e-08;10!UBERON:0001708;4.95e-08;4!UBERON:0008895;4.95e-08;4!UBERON:0001801;2.56e-07;14!UBERON:0006555;3.23e-07;15!UBERON:0004819;3.23e-07;15!UBERON:0001285;3.23e-07;15!UBERON:0007684;3.23e-07;15!UBERON:0006554;4.69e-07;30!UBERON:0001008;4.69e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,2.70e-12,4;UBERON:0001778,6.99e-10,3;UBERON:0001775,6.99e-10,3;UBERON:0007625,2.90e-09,11;UBERON:0001708,3.09e-08,4;UBERON:0008895,3.09e-08,4;UBERON:0002203,3.22e-08,6;UBERON:0001768,3.22e-08,6;UBERON:0002200,3.22e-08,6;UBERON:0004810,5.65e-08,10;UBERON:0004211,3.58e-07,15;UBERON:0009773,3.58e-07,15;UBERON:0001231,3.58e-07,15;UBERON:0001285,3.58e-07,15;UBERON:0007684,3.58e-07,15;UBERON:0004208,3.58e-07,15;UBERON:0001801,3.85e-07,14 | |||
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|short_description=p6@ENST00000473756 | |||
}} |
Revision as of 01:41, 13 September 2013
Short description: | p6@ENST00000473756 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ENST00000473756_5end |
Coexpression cluster: | C1081_papillotubular_Renal_Mast_giant_meningioma_mucinous_gall |
Association with transcript: | 237bp_to_ENST00000473756_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 7.28e-11 | 3 |
ciliated cell | 6.99e-10 | 3 |
ciliated epithelial cell | 6.99e-10 | 3 |
multi-ciliated epithelial cell | 6.99e-10 | 3 |
non-pigmented ciliary epithelial cell | 6.99e-10 | 3 |
epithelial cell | 1.74e-09 | 253 |
kidney cell | 2.73e-08 | 17 |
kidney epithelial cell | 2.73e-08 | 17 |
kidney tubule cell | 5.65e-08 | 10 |
nephron tubule epithelial cell | 5.65e-08 | 10 |
epithelial cell of nephron | 3.58e-07 | 15 |
skeletal muscle myoblast | 3.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 2.70e-12 | 4 |
ciliary epithelium | 6.99e-10 | 3 |
ciliary body | 6.99e-10 | 3 |
pigment epithelium of eye | 2.90e-09 | 11 |
jaw skeleton | 3.09e-08 | 4 |
splanchnocranium | 3.09e-08 | 4 |
vasculature of eye | 3.22e-08 | 6 |
uvea | 3.22e-08 | 6 |
vasculature of head | 3.22e-08 | 6 |
nephron tubule epithelium | 5.65e-08 | 10 |
nephron epithelium | 3.58e-07 | 15 |
renal tubule | 3.58e-07 | 15 |
nephron tubule | 3.58e-07 | 15 |
nephron | 3.58e-07 | 15 |
uriniferous tubule | 3.58e-07 | 15 |
nephrogenic mesenchyme | 3.58e-07 | 15 |
anterior segment of eyeball | 3.85e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 1.60e-07 | 4 |
clear cell adenocarcinoma | 2.87e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.