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FFCP PHASE1:Mm9::chr14:121434981..121435024,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=223254|HGNC=|UniProt=F8VPU2,Q8BM51,C4IXU2|association_with_transcript=185bp_to_NM_134082,uc007vaa.1_5end|description=CAGE_peak_2_at_Farp1_5end|id=chr14:121434981..121435024,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.63e-09!333;UBERON:0005153!6.08e-08!17;UBERON:0002048!1.11e-07!14;UBERON:0000117!1.11e-07!14;UBERON:0000171!1.11e-07!14;UBERON:0000170!1.11e-07!14;UBERON:0005597!1.11e-07!14;UBERON:0000118!1.11e-07!14;UBERON:0000922!2.55e-07!328;UBERON:0000464!4.43e-07!57;UBERON:0005178!8.15e-07!17;UBERON:0005181!8.15e-07!17;UBERON:0002224!8.15e-07!17;UBERON:0000915!8.15e-07!17;UBERON:0008947!8.15e-07!17;UBERON:0003258!8.15e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005153,6.04e-08,17;UBERON:0002048,1.10e-07,14;UBERON:0000117,1.10e-07,14;UBERON:0000171,1.10e-07,14;UBERON:0000170,1.10e-07,14;UBERON:0005597,1.10e-07,14;UBERON:0000118,1.10e-07,14;UBERON:0005178,8.10e-07,17;UBERON:0005181,8.10e-07,17;UBERON:0002224,8.10e-07,17;UBERON:0000915,8.10e-07,17;UBERON:0008947,8.10e-07,17;UBERON:0003258,8.10e-07,17|phase1_expression=8.64803774365887,4.88565570695105,3.63999391511629,16.3330674105688,8.01433167914156,18.298840638396,14.4839837169226,0,0.422366166455,0,0.34243593645101,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0.274228867211478,0,12.7564935226605,6.15603897445489,6.00759515019551,8.63959083084396,8.25873411841812,4.59385571292016,6.8921919385452,6.46413698057667,12.5415456841207,9.57714493087737,5.76499327703792,0,0,0,19.6419101430867,10.472782657585,16.3335485009895,1.25559489221072,0,1.57057123192139,1.76469446409304,3.41522742479223,0,32.8590694916257,35.5833028580496,31.2029478674859,41.4667412504461,29.6514212677407,36.4679063339223,40.6358489065252,23.7976916763116,18.6878333674463,0,2.17608642603403,0,27.5267596558463,21.203474555468,20.6268836910977,17.3992156339254,14.2827564403449,18.3811107016792,33.5456086748441,25.789549087223,1.7997994345628,2.96659908770092,7.104801149461,17.9760066311043,12.2949857702897,7.05089363697648,7.42532660824299,8.83364837675805,16.2821061110168,12.1477697523387,4.89963196859816,8.62609239164127,11.0306254393203,16.5173821499083,14.1732945274558,15.9750794586493,19.7829431595291,19.4868680873133,19.7947080811569,7.2587579740359,13.5063026407603,14.9742282821274,22.3917724959987,15.9456282494995,16.0303523409758,2.12033341332915,3.85414956544606,27.2472619379577,13.7667820317022,10.1995700056163,14.0322829825832,16.8941868536394,21.5052905806721,8.14577636764161,23.0080935480378,17.9252343175979,20.8470348961101,10.4224130634744,35.931413676009,53.5091003383956,85.3280043783997,19.2677026499981,17.4818307177818,18.1988800205322,9.24889425724386,10.8753911131812,9.50029690014878,22.2061218260654,23.1393763517227,22.1390877365816,15.3737093363675,19.4021366773913,8.79666139307728,26.449861547578,10.5557530551536,2.65383165584962,29.9268672402707,11.2629174414801,12.6067565815158,37.2783522436244,25.7647101370161,20.9446706813455,15.8383374229327,0,0,0.127070227073065,22.6183865501282,17.8425235099264,9.67538511269056,20.8589184230732,12.7857728665165,18.4931359658008,19.6311928311987,25.4598409625791,12.6895110022295,22.9977710174644,9.89076722666428,17.0457780281142,12.644615743841,18.9065236295617,20.0437407721501,19.3223657589771,15.373646434182,13.6804517857204,16.557015727297,34.9220148551204,32.3371397086971,27.2724242454121,21.9195732427575,31.141291913267,34.8252166522167,33.1309239616789,30.0541742895925,0,0,0.284163499395593,23.8194638415827,24.6252362980151,17.6460820231795,31.2503050972478,19.0861304794982,18.357786433598,20.9280550275367,15.0233104783787,16.1136172466694,16.2914251414346,19.8642631535705,12.2413902414242,10.3801991071986,13.173006917463,11.4075455946316,14.2997165023607,9.36431972651488,15.8601015832223,13.2225283331772,22.82184280727,22.2947204986021,24.2270827285535,18.1515172161008,15.1217069814512,12.3646656973163,11.8632265386128,10.5407331023367,11.3100843960121,12.5342577385925,15.4021628824105,14.3811105384675,13.6166971421057,15.3338780405863,22.3808123124636,32.3323290685533,34.9393980586549,36.2499363564659,35.2993526645079,27.5633772168952,33.7683108243534,23.9128439726956,20.7238320750615,18.6329717521919,16.3048944897932,11.1786220829783,11.9900987019054,7.64531182108503,13.1859078902527,14.7118067448974,13.7497959961967,19.2756412092043,5.83686816390127,9.06052663520669,23.0029130443767,11.9085103253921,20.594486425561,21.4692046255045,19.9131129009323,9.16642690590398,39.1676763153202,19.3281240005894,22.8150967018836,27.4987038955805,30.0403517809283,36.348857864874,39.5152443870783,35.7094575579772,43.9802052056273,35.8772797231015,51.3444355077108,41.7851452525132,32.2920916089225,32.8353362980031,0,0,23.1129208318947,27.5936746304732,17.9816660786327,15.589154316763,18.196778936811,9.59389523376617,12.304820557234,12.4940398174924,11.8482868753039,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|EntrezGene=223254
|HGNC=
|UniProt=F8VPU2,Q8BM51,C4IXU2
|association_with_transcript=185bp_to_NM_134082,uc007vaa.1_5end
|description=CAGE_peak_2_at_Farp1_5end
|id=chr14:121434981..121435024,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!4.63e-09!333;UBERON:0005153!6.08e-08!17;UBERON:0002048!1.11e-07!14;UBERON:0000117!1.11e-07!14;UBERON:0000171!1.11e-07!14;UBERON:0000170!1.11e-07!14;UBERON:0005597!1.11e-07!14;UBERON:0000118!1.11e-07!14;UBERON:0000922!2.55e-07!328;UBERON:0000464!4.43e-07!57;UBERON:0005178!8.15e-07!17;UBERON:0005181!8.15e-07!17;UBERON:0002224!8.15e-07!17;UBERON:0000915!8.15e-07!17;UBERON:0008947!8.15e-07!17;UBERON:0003258!8.15e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0005153,6.04e-08,17;UBERON:0002048,1.10e-07,14;UBERON:0000117,1.10e-07,14;UBERON:0000171,1.10e-07,14;UBERON:0000170,1.10e-07,14;UBERON:0005597,1.10e-07,14;UBERON:0000118,1.10e-07,14;UBERON:0005178,8.10e-07,17;UBERON:0005181,8.10e-07,17;UBERON:0002224,8.10e-07,17;UBERON:0000915,8.10e-07,17;UBERON:0008947,8.10e-07,17;UBERON:0003258,8.10e-07,17
|phase1_expression=8.64803774365887,4.88565570695105,3.63999391511629,16.3330674105688,8.01433167914156,18.298840638396,14.4839837169226,0,0.422366166455,0,0.34243593645101,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0.274228867211478,0,12.7564935226605,6.15603897445489,6.00759515019551,8.63959083084396,8.25873411841812,4.59385571292016,6.8921919385452,6.46413698057667,12.5415456841207,9.57714493087737,5.76499327703792,0,0,0,19.6419101430867,10.472782657585,16.3335485009895,1.25559489221072,0,1.57057123192139,1.76469446409304,3.41522742479223,0,32.8590694916257,35.5833028580496,31.2029478674859,41.4667412504461,29.6514212677407,36.4679063339223,40.6358489065252,23.7976916763116,18.6878333674463,0,2.17608642603403,0,27.5267596558463,21.203474555468,20.6268836910977,17.3992156339254,14.2827564403449,18.3811107016792,33.5456086748441,25.789549087223,1.7997994345628,2.96659908770092,7.104801149461,17.9760066311043,12.2949857702897,7.05089363697648,7.42532660824299,8.83364837675805,16.2821061110168,12.1477697523387,4.89963196859816,8.62609239164127,11.0306254393203,16.5173821499083,14.1732945274558,15.9750794586493,19.7829431595291,19.4868680873133,19.7947080811569,7.2587579740359,13.5063026407603,14.9742282821274,22.3917724959987,15.9456282494995,16.0303523409758,2.12033341332915,3.85414956544606,27.2472619379577,13.7667820317022,10.1995700056163,14.0322829825832,16.8941868536394,21.5052905806721,8.14577636764161,23.0080935480378,17.9252343175979,20.8470348961101,10.4224130634744,35.931413676009,53.5091003383956,85.3280043783997,19.2677026499981,17.4818307177818,18.1988800205322,9.24889425724386,10.8753911131812,9.50029690014878,22.2061218260654,23.1393763517227,22.1390877365816,15.3737093363675,19.4021366773913,8.79666139307728,26.449861547578,10.5557530551536,2.65383165584962,29.9268672402707,11.2629174414801,12.6067565815158,37.2783522436244,25.7647101370161,20.9446706813455,15.8383374229327,0,0,0.127070227073065,22.6183865501282,17.8425235099264,9.67538511269056,20.8589184230732,12.7857728665165,18.4931359658008,19.6311928311987,25.4598409625791,12.6895110022295,22.9977710174644,9.89076722666428,17.0457780281142,12.644615743841,18.9065236295617,20.0437407721501,19.3223657589771,15.373646434182,13.6804517857204,16.557015727297,34.9220148551204,32.3371397086971,27.2724242454121,21.9195732427575,31.141291913267,34.8252166522167,33.1309239616789,30.0541742895925,0,0,0.284163499395593,23.8194638415827,24.6252362980151,17.6460820231795,31.2503050972478,19.0861304794982,18.357786433598,20.9280550275367,15.0233104783787,16.1136172466694,16.2914251414346,19.8642631535705,12.2413902414242,10.3801991071986,13.173006917463,11.4075455946316,14.2997165023607,9.36431972651488,15.8601015832223,13.2225283331772,22.82184280727,22.2947204986021,24.2270827285535,18.1515172161008,15.1217069814512,12.3646656973163,11.8632265386128,10.5407331023367,11.3100843960121,12.5342577385925,15.4021628824105,14.3811105384675,13.6166971421057,15.3338780405863,22.3808123124636,32.3323290685533,34.9393980586549,36.2499363564659,35.2993526645079,27.5633772168952,33.7683108243534,23.9128439726956,20.7238320750615,18.6329717521919,16.3048944897932,11.1786220829783,11.9900987019054,7.64531182108503,13.1859078902527,14.7118067448974,13.7497959961967,19.2756412092043,5.83686816390127,9.06052663520669,23.0029130443767,11.9085103253921,20.594486425561,21.4692046255045,19.9131129009323,9.16642690590398,39.1676763153202,19.3281240005894,22.8150967018836,27.4987038955805,30.0403517809283,36.348857864874,39.5152443870783,35.7094575579772,43.9802052056273,35.8772797231015,51.3444355077108,41.7851452525132,32.2920916089225,32.8353362980031,0,0,23.1129208318947,27.5936746304732,17.9816660786327,15.589154316763,18.196778936811,9.59389523376617,12.304820557234,12.4940398174924,11.8482868753039,11.709471099675,8.46634961513098,9.90767857760913,13.7635638569464,14.9050487534769,15.4162233399144,17.6726724031994,17.7425106510336,31.1614806417697,28.3423309275222,32.1691739796444,57.080409486184,25.4919667962731,19.3487076457441,29.0451822824083,32.7785101097658,33.5104311258881,25.0675444373175,27.2650297108129,26.7373033788541,32.551786067389,22.1379078007497,39.191506434311,43.5762695364849,27.0091641046965,25.2249433376371,27.4351404840438,29.2611385509751,31.9280183507706,30.4415688113924,31.0554248096891,16.8963629805871,24.5725202202031,21.8323114074412,29.6795255294664,19.2142667768128,23.22047609734,16.4733834724328,21.1741760671129,12.8251568117134,13.9068976507882,0.854354403989263,20.432299928359,14.6303676622072,2.63715839806567,1.77702496037333,3.20289442489132,0.169978429993855,0.559805809294632,0,8.59203556213602,14.0769517143605,22.3651413839534,18.2529025988844,19.4452115293456,17.0322799722019,15.1048067950999,19.0102948168273,12.3025292732494,19.3126310204771,35.4163408459548,0.56369293868419,30.9499250311036,24.6533150781075,31.5010925117357,26.2194441659794,21.288471811838,23.7061622064423,16.1453437206498,10.4859344425711,2.41584120826006,2.30424005006292,4.10814456816632,19.4616206678558,16.3310421892075,10.0039033692902,9.13036147904155,7.9472541912506,4.32703618271888,2.95379054349154,3.33189284828887,2.43861781295999,2.01652370273681,3.31356794515158,1.44317762460494,0.935015217452552,9.9761368790693,13.763129109192,11.7525152158413,12.927115460034,37.2855916482128,29.0907836949332,33.3335956166422,21.8655746660647,15.5487352250963,16.3778034358949,10.1271552031579,9.73922372846974,13.748254587495,12.3314853558716,11.3309084608455,10.8003600037089,16.6618845192962,17.2194115413998,16.5683299760582,18.8892972603202,26.3356416444681,19.6343646617254,24.796885140966,21.7997689133102,22.9804385562518,24.0026466025744,24.7242068686673,32.4128401687733,24.7643267528522,31.4314331863897,26.0304351112785,24.721357972049,25.9942118763769,26.6500575954046,30.0065025508336,28.6234285083793,26.6214724239913,32.5547861634612,22.963031540966,31.5439712194582,27.1537983423786,22.6514380449955,31.5401724092153,27.1976109400305,25.892070014853,23.9635644463332,25.2546922980329,30.420121501473,30.8628249411756,29.4214844947952,27.4827505827822,25.3723246765207,24.7898945897546,29.1288982581524,30.7267010863673,21.5217079769776,19.9830080264917,28.6932498103265,23.3826904266686,18.3175590140133
|short_description=p2@Farp1
}}

Revision as of 01:34, 13 September 2013

Short description:p2@Farp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Farp1_5end
Coexpression cluster:NA
Association with transcript: 185bp_to_NM_134082, uc007vaa.1_5end
EntrezGene:Farp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Farp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.30
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.26
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I26.46
Ileum epithelium, pool1.CNhs13199.10252-104B912.54
Ileum epithelium, pool2.CNhs13232.10253-104C19.58
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F519.64
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.47
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D832.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D935.58
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B331.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B741.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C229.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B836.47
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C340.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C423.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C127.53
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E121.20
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C520.63
Mouse Granule cells, donor1.CNhs12131.11713-123C317.40
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C633.55
Mouse Meningeal cells, donor3.CNhs12109.11639-122D125.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C817.98
Mouse Microglia, donor2.CNhs12634.11736-123E812.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.05
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.79
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.03
Mouse Schwann, donor1.CNhs12507.11728-123D92.12
Mouse Schwann, donor2.CNhs12573.11746-123F93.85
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G327.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F713.77
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.03
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I723.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E317.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I820.85
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H135.93
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I853.51
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B685.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.48
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.20
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.25
accessory axillary lymph node, adult.CNhs10475.1063-29H910.88
adrenal gland, adult.CNhs10508.49-24D79.50
adrenal gland, embryo E14.CNhs11038.406-44C522.21
adrenal gland, embryo E16.CNhs11004.1254-43D623.14
adrenal gland, embryo E17.CNhs11043.1263-45I122.14
adrenal gland, embryo E18.CNhs11026.1262-18F515.37
adrenal gland, neonate N00.CNhs11191.1311-23C119.40
adrenal gland, neonate N25.CNhs11223.1377-27I38.80
amnion, adult pregnant day17.5.CNhs10488.583-22A826.45
aorta, adult.CNhs10498.46-23H110.56
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F529.93
bone (os femoris), neonate N16.CNhs11225.1525-43A611.26
bone (os femoris), neonate N20.CNhs11195.1350-25C312.61
cecum, adult.CNhs10467.37-13H437.28
cerebellum, adult.CNhs10494.15-8B225.76
cerebellum, neonate N30.CNhs11135.1395-42I220.94
colon, adult.CNhs10468.36-18H715.84
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A422.62
corpus striatum, adult.CNhs10487.19-21D817.84
corpus striatum, neonate N00.CNhs11226.630-43F19.68
cortex, adult.CNhs10473.12-14D520.86
cortex, neonate N30.CNhs11107.1392-42F212.79
diencephalon, adult.CNhs10482.20-12F218.49
diencephalon, neonate N30.CNhs11201.1388-42B219.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.69
epididymis, adult.CNhs10490.58-23B223.00
eyeball, adult.CNhs10484.31-12G49.89
eyeball, embryo E12.CNhs11016.345-16C617.05
eyeball, embryo E14.CNhs10521.399-16E212.64
eyeball, embryo E15.CNhs10593.426-16C918.91
eyeball, embryo E17.CNhs11023.1261-18D420.04
eyeball, neonate N00.CNhs11207.633-15C619.32
eyeball, neonate N01.CNhs11140.1532-43E715.37
eyeball, neonate N02.CNhs11205.1551-44G813.68
eyeball, neonate N16.CNhs11188.777-19A216.56
forelimb, embryo E11.CNhs10596.335-25E234.92
forelimb, embryo E12.CNhs10600.359-14H232.34
forelimb, embryo E13.CNhs10589.384-1E227.27
forelimb, embryo E14.CNhs10577.413-26A821.92
forelimb, embryo E15.CNhs11007.437-20E731.14
forelimb, embryo E17.CNhs10598.1517-43C434.83
forelimb, embryo E18.CNhs11008.1520-43B533.13
gonad, embryo E13.CNhs11044.1564-45I630.05
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E923.82
heart, embryo E12.CNhs11015.353-12F524.63
heart, embryo E13.CNhs11013.376-3I917.65
heart, embryo E14.CNhs10597.403-26D431.25
heart, embryo E15.CNhs11017.431-16C819.09
heart, embryo E16.CNhs11021.457-17C618.36
heart, embryo E17.CNhs11025.479-18E520.93
heart, embryo E18.CNhs11030.1283-20G315.02
heart, neonate N00.CNhs11213.639-21E316.11
heart, neonate N03.CNhs11221.1349-25I216.29
heart, neonate N10.CNhs11118.749-24G119.86
heart, neonate N16.CNhs11209.782-15G112.24
heart, neonate N20.CNhs11127.821-26I610.38
heart, neonate N25.CNhs11196.1351-25D313.17
heart, neonate N30.CNhs11202.1390-42D211.41
hippocampus, adult.CNhs10478.13-16E814.30
hippocampus, neonate N00.CNhs11228.627-43G19.36
intestinal mucosa, adult.CNhs10506.860-29I315.86
intestine, adult.CNhs10496.178-9A313.22
intestine, embryo E12.CNhs11019.1251-16I522.82
intestine, embryo E13.CNhs11010.381-16D522.29
intestine, embryo E15.CNhs10602.976-16D824.23
intestine, embryo E16.CNhs10585.463-22H418.15
intestine, embryo E17.CNhs10582.482-18D315.12
intestine, embryo E18.CNhs10526.1289-20F712.36
intestine, neonate N00.CNhs11126.644-26D111.86
intestine, neonate N01.CNhs11192.1322-23E910.54
intestine, neonate N06.CNhs11102.688-20B811.31
intestine, neonate N07.CNhs11095.720-20F212.53
intestine, neonate N10.CNhs11098.755-23A515.40
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E313.62
intestine, neonate N30.CNhs11131.1384-42G115.33
kidney, embryo E14.CNhs10606.411-4I922.38
kidney, embryo E15.CNhs10997.434-16F832.33
kidney, embryo E16.CNhs10584.464-22A534.94
kidney, embryo E17.CNhs11028.483-18I236.25
kidney, embryo E18.CNhs11001.1288-20C735.30
kidney, neonate N00.CNhs11214.646-21G727.56
kidney, neonate N10.CNhs11206.758-6D533.77
kidney, neonate N20.CNhs11113.832-19I123.91
kidney, neonate N25.CNhs11122.1353-25F320.72
kidney, neonate N30.CNhs11203.1385-42H118.63
liver, adult pregnant day01.CNhs10466.508-5B216.30
liver, embryo E12.CNhs10601.355-15F811.18
liver, embryo E13.CNhs10524.378-3H611.99
liver, embryo E14.CNhs10594.409-16E17.65
liver, embryo E15.CNhs10520.433-16D713.19
liver, embryo E16.CNhs10523.462-17F514.71
liver, embryo E17.CNhs10510.481-18A313.75
liver, embryo E18.CNhs10579.499-43G419.28
liver, neonate N00.CNhs11117.641-24F45.84
liver, neonate N03.CNhs11123.1345-25G29.06
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H211.91
liver, neonate N10.CNhs11115.751-24B920.59
liver, neonate N20.CNhs11220.823-25A321.47
liver, neonate N25.CNhs11198.1368-26H119.91
liver, neonate N30.CNhs11106.1382-42D19.17
lung, adult.CNhs10474.28-22B139.17
lung, embryo E12.CNhs10522.354-16G219.33
lung, embryo E14.CNhs10604.404-26F822.82
lung, embryo E15.CNhs11020.432-17C527.50
lung, embryo E16.CNhs10998.458-17B630.04
lung, embryo E17.CNhs10605.480-44A636.35
lung, embryo E18.CNhs10583.1287-20I639.52
lung, neonate N00.CNhs11224.640-42C635.71
lung, neonate N06.CNhs11212.683-20E543.98
lung, neonate N07.CNhs11111.715-19A335.88
lung, neonate N10.CNhs11219.750-23E651.34
lung, neonate N20.CNhs11109.822-18A441.79
lung, neonate N25.CNhs11119.1359-25C732.29
lung, neonate N30.CNhs11133.1394-42H232.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B623.11
mammary gland, adult pregnant day19.CNhs10476.588-5H227.59
medulla oblongata, adult.CNhs10477.17-12C217.98
medulla oblongata, neonate N30.CNhs11200.1396-42A315.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C718.20
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.59
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.85
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.71
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.76
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.91
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.42
olfactory brain, adult.CNhs10489.18-22I917.67
ovary, adult.CNhs10507.91-2I717.74
ovary, embryo E18.CNhs11040.505-44H731.16
ovary, neonate N00.CNhs11217.1299-22I428.34
oviduct, adult pregnant day01.CNhs10500.988-6G632.17
pancreas, adult.CNhs10486.34-16E457.08
pancreas, embryo E14.CNhs11012.405-44F425.49
pancreas, embryo E15.CNhs11042.1556-45F219.35
pancreas, embryo E16.CNhs11003.460-26E529.05
pancreas, embryo E17.CNhs10599.1558-45G332.78
pancreas, embryo E18.CNhs10580.1535-43I733.51
pancreas, neonate N00.CNhs11105.645-26G925.07
pancreas, neonate N01.CNhs11138.1531-43D727.27
pancreas, neonate N02.CNhs11139.1539-43D826.74
pancreas, neonate N16.CNhs11136.787-43B632.55
pancreas, neonate N25.CNhs11094.1555-45E222.14
pancreas, neonate N30.CNhs11182.1548-44H539.19
pituitary gland, adult.CNhs10493.21-1G843.58
pituitary gland, embryo E12.CNhs11018.346-16E627.01
pituitary gland, embryo E13.CNhs11009.370-44C725.22
pituitary gland, embryo E14.CNhs11037.398-44A527.44
pituitary gland, embryo E15.CNhs10592.427-16B929.26
pituitary gland, embryo E16.CNhs11036.449-43F631.93
pituitary gland, embryo E17.CNhs11039.1265-44F530.44
pituitary gland, neonate N00.CNhs11190.1308-22E931.06
placenta, adult pregnant day10.CNhs10472.539-13I716.90
placenta, adult pregnant day17.CNhs10464.577-18G324.57
prostate, adult.CNhs10470.859-1F821.83
skin, adult.CNhs10492.30-1C329.68
skin, neonate N00.CNhs11124.650-25G419.21
skin, neonate N03.CNhs11215.662-22H323.22
skin, neonate N06.CNhs11097.693-20I516.47
skin, neonate N10.CNhs11108.762-6C421.17
small intestine, neonate N16.CNhs11114.790-21I112.83
spinal cord, adult.CNhs10505.24-13C913.91
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C120.43
spleen, embryo E18.CNhs11011.1271-21F214.63
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E314.08
stomach, embryo E15.CNhs10603.1252-16G822.37
stomach, embryo E16.CNhs11022.459-17D418.25
stomach, embryo E17.CNhs11006.1035-18D519.45
stomach, embryo E18.CNhs10999.1286-20C617.03
stomach, neonate N03.CNhs11193.1340-24B815.10
stomach, neonate N07.CNhs11210.718-18A919.01
stomach, neonate N25.CNhs11104.1355-25E412.30
stomach, neonate N30.CNhs11134.1386-42I119.31
submandibular gland, adult.CNhs10469.59-29C135.42
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F530.95
testis, embryo E15.CNhs11034.443-27C524.65
testis, embryo E16.CNhs11033.470-26G531.50
testis, embryo E17.CNhs11029.486-18I526.22
testis, embryo E18.CNhs11027.503-18G521.29
testis, neonate N00.CNhs11189.1300-22B723.71
testis, neonate N07.CNhs11222.726-26I416.15
testis, neonate N10.CNhs11204.763-44D910.49
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I419.46
thymus, embryo E15.CNhs11005.430-45I216.33
thymus, embryo E16.CNhs11002.456-26C510.00
thymus, embryo E17.CNhs10581.478-18C19.13
thymus, embryo E18.CNhs10595.1273-19G47.95
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C43.33
thymus, neonate N07.CNhs11211.713-19D32.44
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A23.31
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B49.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.75
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.93
urinary bladder, adult.CNhs10481.879-12E437.29
uterus, adult pregnant day19.CNhs10497.590-15F529.09
uterus, adult.CNhs10509.92-27E533.33
vagina, adult.CNhs10502.89-27D521.87
vesicular gland, adult.CNhs10491.51-27F815.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I818.89
whole body, embryo E12.CNhs10587.857-27C926.34
whole body, embryo E13.CNhs10512.372-23H219.63
whole body, embryo E14.5.CNhs10578.420-27D224.80
whole body, embryo E14.CNhs10519.395-14B121.80
whole body, embryo E16.CNhs10514.453-14F222.98
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G524.72
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G532.41
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G531.43
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G524.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G526.65
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G530.01
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G528.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G526.62
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G532.55
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G531.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G527.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.65
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G531.54
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G527.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G525.89
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G523.96
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G525.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G530.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G529.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G527.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G525.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G524.79
whole body, embryo E17.5.CNhs10513.490-9F929.13
whole body, embryo E17.CNhs10517.475-3I530.73
whole body, embryo E18.CNhs10516.493-3B321.52
whole body, neonate N00.CNhs10525.657-19C219.98
whole body, neonate N01.CNhs10576.659-23C628.69
whole body, neonate N06.CNhs10515.692-21D123.38
whole body, neonate N10.CNhs10518.761-6B418.32





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial bud6.04e-0817
lung1.10e-0714
respiratory tube1.10e-0714
respiration organ1.10e-0714
pair of lungs1.10e-0714
lung primordium1.10e-0714
lung bud1.10e-0714
thoracic cavity element8.10e-0717
thoracic segment organ8.10e-0717
thoracic cavity8.10e-0717
thoracic segment of trunk8.10e-0717
respiratory primordium8.10e-0717
endoderm of foregut8.10e-0717







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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