FFCP PHASE1:Hg19::chr3:8543591..8543602,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29995|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6633|TSSclassifier=S|UniProt=F8WB09|association_with_transcript=17bp_to_ENST00000456506_5end|coexpression_cluster_id=C2756|description=CAGE_peak_4_at_LMCD1_5end|id=chr3:8543591..8543602,+|ontology_enrichment_celltype=CL:0000055!6.94e-09!180;CL:0000136!9.36e-07!15|ontology_enrichment_celltype_v019=CL:0000136;2.79e-09;13|ontology_enrichment_celltype_v019_2=CL:0000136,1.02e-08,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!2.44e-10!365;UBERON:0002100!5.07e-10!216;UBERON:0003103!1.69e-09!69;UBERON:0000483!3.70e-08!309;UBERON:0000119!6.89e-08!312;UBERON:0002417!1.26e-07!61;UBERON:0000916!1.26e-07!61;UBERON:0009569!1.64e-07!113|ontology_enrichment_uberon_v019=UBERON:0004457;1.02e-07;9!UBERON:0000042;1.02e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0003103,2.77e-08,68;UBERON:0002100,3.09e-08,199;UBERON:0004457,4.36e-08,12;UBERON:0000042,4.36e-08,12;UBERON:0002417,1.77e-07,60;UBERON:0000916,1.77e-07,60;UBERON:0009569,9.13e-07,112|phase1_expression=3.81524596468169,3.8538094300377,4.08767771878316,4.00293193412522,2.68176656656373,2.61701557230111,0,1.89515962028049,1.04474251279935,1.22866968250754,2.09340350391728,2.40285509343189,1.84636884759917,0,0.331397375727916,0,0,0,0,2.83178433576612,1.22400414746552,3.44800193625897,2.0036519099174,0.958120975510189,2.51085279189606,1.75750833220288,1.39571002064908,2.04648031415566,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32208974556972,0,0,0,0,0,0,0,0,0,0,0.668745981562712,0.651844533267181,0,0,0.668462741311041,0.883817722424512,1.10766947291811,1.35401931882508,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.40648818027883,0.722878304769133,1.50401373190767,1.73815822752988,1.5905718941022,1.94653948121054,2.07976597760949,1.55210578223795,1.75669571386252,1.63723844372141,0,0.370784442784429,0,0,0.132957960518865,0,0,0,1.59009925893364,0,1.04142150482278,0,0.838998872419812,0,0.626984899610432,0,0,1.00416183829401,0.805658634218294,0,0.24406205754817,0.735326160691737,0,0.714397826272638,0.22452937262617,0.450445921933289,0,0,0.549605231791222,0,0,0,0.993943903390637,2.78587125662075,1.72131935057184,1.14734648299525,0.709336764396714,1.12135520028461,1.06748995729705,0.98667019366864,1.55605517699883,0.808264032418128,0.163461903113459,0.908144565869588,0.576175924479999,0.234321431833797,0.312160076830321,0,0.298897361103602,1.05691048779388,2.26622122115384,1.82586048712923,0,0.368502951935304,0,1.18800285728205,0.494533858557114,0.910161361938026,1.43723628363248,0.168336113954066,0.125118519871964,0,0.438977620880838,1.22595118319608,0.600952235626387,0.907457465280168,1.25572744982203,1.70845911054854,1.05965950579781,0.600182192168805,1.44273540933814,1.54584324027377,0.37223371266318,1.35021065793013,0.779496041289589,1.7670364197088,2.02509777013059,0,0.710019185033229,0.906768884048762,0.339121184620975,0.386521706326594,0.272746120590835,0,0.365921118388786,0.795178609928912,0.580969714347592,0.518305275076852,0.252320850875628,0,0,1.28648187638577,1.38134921352481,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,3.7041661019826,1.47008711385542,0,0,1.18157981336281,0,0.860919069801795,0.514703430895577,0.439001141634502,0,0.100528972411631,0.0925884451585296,0.651616610620649,0,1.44331342025273,1.15930404975077,1.17408694235822,0.288732895522148,0.462985512576611,0.380508304469197,0,0.858486162094873,0,0,0,1.87467667973554,2.01578553838631,0.283550194484773,0,0,0,0,0,0,0,0.12624243342638,1.33345578013555,1.14596527667483,0,0,1.7480673759565,1.8020583470635,1.14330573052231,0.224262168690721,0,0.2933531432838,1.68053230485111,0,2.535908257668,0.797814349754612,2.08014873822732,2.05765899409714,0,1.0656887160644,1.28680194292333,3.25572963234866,3.29296134712308,0.977208552881205,1.06617584622764,3.16780749173372,1.20575750823834,1.74306691720059,1.19967589418468,0,0,0,0.239624855491583,0,0,1.59259437334337,0.61642896765115,1.07436577943937,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.623912584592421,0.892144943985809,0.473107245101804,0.234282829985426,1.80567659836631,4.5481500811197,2.0694614258501,0,0.737476674166813,0.260650843404249,0.587403472388222,0,0,0,0.106727557803444,0.606255142892519,4.99306318531491,5.74541557326393,2.97729369382532,4.29693525206575,3.64858122762996,2.94720043288112,6.65219423786715,3.05622450172854,1.48418066444991,0.925258162815933,1.42049380250502,0.246381468041427,0,0.464841513839837,2.65890789101569,0.601519410909855,0.0920809889358963,0.114814448164607,0,0.262248829918848,0.451199612907412,0.924184045252977,4.7060986150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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29995 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6633 | |||
|TSSclassifier=S | |||
|UniProt=F8WB09 | |||
|association_with_transcript=17bp_to_ENST00000456506_5end | |||
|coexpression_cluster_id=C2756 | |||
|description=CAGE_peak_4_at_LMCD1_5end | |||
|id=chr3:8543591..8543602,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.94e-09!180;CL:0000136!9.36e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.79e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.02e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.44e-10!365;UBERON:0002100!5.07e-10!216;UBERON:0003103!1.69e-09!69;UBERON:0000483!3.70e-08!309;UBERON:0000119!6.89e-08!312;UBERON:0002417!1.26e-07!61;UBERON:0000916!1.26e-07!61;UBERON:0009569!1.64e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.02e-07;9!UBERON:0000042;1.02e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,2.77e-08,68;UBERON:0002100,3.09e-08,199;UBERON:0004457,4.36e-08,12;UBERON:0000042,4.36e-08,12;UBERON:0002417,1.77e-07,60;UBERON:0000916,1.77e-07,60;UBERON:0009569,9.13e-07,112 | |||
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| |||
|short_description=p4@LMCD1 | |||
}} |
Revision as of 01:29, 13 September 2013
Short description: | p4@LMCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_LMCD1_5end |
Coexpression cluster: | C2756_skeletal_Adipocyte_mature_Preadipocyte_Hepatic_Mesenchymal_aorta |
Association with transcript: | 17bp_to_ENST00000456506_5end |
EntrezGene: | LMCD1 |
HGNC: | 6633 |
UniProt: | F8WB09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.02e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
compound organ | 2.77e-08 | 68 |
trunk | 3.09e-08 | 199 |
cavity lining | 4.36e-08 | 12 |
serous membrane | 4.36e-08 | 12 |
abdominal segment of trunk | 1.77e-07 | 60 |
abdomen | 1.77e-07 | 60 |
subdivision of trunk | 9.13e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.