FFCP PHASE1:Mm9::chr13:97960589..97960594,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=203|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:97960589..97960594,-|id=chr13:97960589..97960594,-|ontology_enrichment_celltype=CL:0000723!9.16e-08!91;CL:0000048!9.16e-08!91;CL:0000034!4.74e-07!97;CL:0002321!5.92e-07!70;CL:0000220!5.92e-07!70;CL:0000393!8.32e-07!39;CL:0000211!8.32e-07!39;CL:0000055!9.48e-07!50|ontology_enrichment_celltype_v019_2=CL:0000723,2.39e-12,91;CL:0000048,2.39e-12,91;CL:0000034,2.51e-11,97;CL:0000393,1.14e-08,39;CL:0000211,1.14e-08,39;CL:0002321,1.49e-08,70;CL:0000540,2.25e-07,33;CL:0000047,2.25e-07,33;CL:0000031,2.25e-07,33;CL:0000404,2.25e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.17e-07,73|phase1_expression=0,0,0.909998478779072,1.81478526784098,4.00716583957078,0.33575854382378,0.700837921786577,7.48915275961142,3.23814060948833,2.57470978954193,1.19852577757853,1.91453181588807,2.73921167889929,2.01066925563694,4.66353666541928,2.42970320867791,7.69518065940961,2.68142840554502,0.685572168028694,3.39511721438424,1.10556277196391,2.28369187762036,1.04479915655574,0.95995453676044,0.68822784320151,0,0,0,2.09025761402011,0,0,19.0509202037889,0.61506478758457,126.785344812351,0.866554859253824,0,0.204169356262369,0,1.5626706890476,1.0470474879476,1.76469446409304,0.683045484958446,1.45653105909346,4.28049181116963,2.23029248682932,0.734187008646726,10.1710874765245,0.218025156380447,2.41654801007919,0.58328969722285,0.419959264876088,0,0.167782606057736,0,0.672187598284928,1.54355661621568,2.29226751951005,3.09403255366465,2.42779753031517,0,0,3.38844532069132,0,5.84934816232909,25.7105254267413,15.6305625288142,14.081205194365,4.2264013585371,1.97010263386108,2.02508907497536,1.68259969081106,3.14216082844184,2.42955395046775,1.46988959057945,0.479227355091182,0,37.4393995397922,2.42605942361857,2.30409799884365,1.71452174049252,0.823388792421687,1.04182674111352,1.3959149950069,29.2636557216474,3.36156145108982,13.5529149317887,1.70846016958924,2.42319279572891,0.605809546665472,0.831287161174641,0.869593466105033,9.46466264679525,4.0798280022465,23.2072372404261,16.8941868536394,4.92829575807069,0.702222100658759,0.170430322578058,0,0,0.14084341977668,1.28326477414318,10.1922095882658,7.11066703153331,1.29894624606728,1.52015919285059,1.01104889002957,2.96878087269556,0,0.445326417194474,2.08182392119363,0.304465478312141,1.38369298353635,0.904335843315735,0.705532242814229,0.879666139307728,0.741584903203122,0.289198713839823,0.884610551949874,0.808834249737046,1.10420759230197,1.45462575940567,1.86391761218122,0,1.04723353406728,0.510914110417183,0.479260498023681,0,0,0.748953197024114,0,0.376963056338593,0.173824320192276,0.767146371990992,0.62336413367868,0.973447578406546,0.81471491080253,0.870848794270651,0.252722758433675,0.210441855886474,0.390361328888111,0.919608417733892,0.180062129805349,0.753524089178575,1.08858398642125,0.640568601424249,0.187403449119458,0.776110112217047,0,0.189106080167819,0,0,1.66828349535359,0,1.23469281844766,0.398068533636986,0,0,1.13665399758237,0.207125772535502,0.938104239924385,1.08037236876609,0.946978942340841,0.983821158737019,1.07986979021165,0.465067889500816,0.536546802799238,0.934122738937356,0.987359099480883,0.820837320395476,0.56748166682099,0.877199924551994,1.3173006917463,2.28150911892632,0.210289948564127,0.617427674275707,1.65209391491899,0.793351699990633,0.213288250535234,1.39342003116263,0.38660238396628,1.81515172161008,0,0.380451252225118,23.7264530772256,0.164698954724011,1.25667604400135,0.795825888164603,0.38992817423824,28.7622210769351,2.37751854862164,2.19055400579804,0.189667900953082,0.799739588268102,0,0.407302655690628,0.387904974335251,0.701358198903186,0.758838445491087,0.295220295959204,0.470996183524124,0.493588655687202,2.07516838961004,0.333690211432188,0,0.899448449539415,1.01430060694251,0,1.01850340712568,0.287696137450811,1.78348749452539,1.37280706594041,53.1942364151212,0.372140947668503,1.87222603868736,1.76805214562978,2.87035861635059,2.41221760681684,1.29327233116623,1.51593129416388,0.325929952884052,0.509235257325564,0.938760993154008,0.335012514883631,0.952174563544055,0.585400943573396,0,0.664394068946325,0.797273843287435,1.47476983244164,1.03610989119537,1.88043776155965,0,1.08781136763742,0.491764273019036,0,0.481651769963376,1.40654023910644,7.21313759657372,1.26235463602186,2.52406575533005,2.34263246577983,3.23135096599198,2.38968797952552,1.78238939265915,8.49229592366497,1.61924280669958,1.75353514746787,4.34816555741176,0,0.141940085208269,0.534196811001766,0.325773918707152,0.494910368917606,2.65490276679926,1.94224508923985,0,0.943025398779491,1.18120757152309,0.922305443831782,0.516856586336442,1.45413491791002,2.13898427030833,2.21225730555071,6.32511651449993,4.12542172992747,0,0.720244376125241,1.55230420539305,1.92903331528433,1.06404140185364,0.356737635204141,1.64549020602121,3.04464949114599,0.469343416127421,1.48282449604674,0.441056796109924,0.49465875882444,0,0.422190474497091,0.596861720015682,1.14898629821543,9.32738677215522,0.18542530201051,0.854354403989263,0.619160603889667,0.370389054739423,1.69531611304222,0.546776910884101,1.14389086603261,0.339956859987711,0.559805809294632,0.414599921413271,0,0.474503990371703,0.406638934253697,0.540026704109006,0.209088296014469,0.655087691238533,0.674321731924103,0.41326727862668,4.4498510137285,0.518459893167171,0,2.25477175473676,0.149516546043979,0.330916980914195,0,1.16243841129958,0.337912250981556,1.05621514781179,1.0416350787516,0.314578033277133,1.20792060413003,0.576060012515731,0,0.810900861160657,1.23253148597793,0.51968329191118,0.537080087002444,0,0.841368146639782,0.886137163047463,0.504832249740738,0.457240839929999,0.705783295957884,0.584747284438515,0.577271049841977,0.584384510907845,0.226730383615211,1.33191572024439,2.06341870201794,0.335769232728157,0.19318959403219,0.375364950902364,0.36630324853453,0.428736758158132,0,3.95326289831947,3.22227665555024,4.58316410751517,2.749650917499,4.7955776383945,3.7769694869485,4.05013500139084,1.35096360967266,1.35942722695261,4.14208249401456,0.830298780673413,0,0.341467211508268,0.729320151204882,0,2.38996560985018,2.44471400581777,1.03017528619447,0.64183841918363,1.51618327058278,1.77435509923168,0.754505365544305,1.21733959710847,1.02440243847791,1.14870937911227,0.476293691283074,0.927074607558844,1.15745532278223,0.824171801606613,0.147198920134397,2.74295401908332,1.06485483695602,1.90748951957857,1.59881058295561,0.941093804153306,0.761531471025089,1.64635175585495,0.789209134313529,2.44447404922551,0.561142271657738,0.593175090620871,1.97008964751127,0,1.39443157067369,0.771626443924566,0.999242311751784,0.467863216890817,0,0.382576664137687,0.661774257358546,0.231867835620421|short_description=p@chr13:97960589..97960594,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=203 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:97960589..97960594,- | |||
|id=chr13:97960589..97960594,- | |||
|ontology_enrichment_celltype=CL:0000723!9.16e-08!91;CL:0000048!9.16e-08!91;CL:0000034!4.74e-07!97;CL:0002321!5.92e-07!70;CL:0000220!5.92e-07!70;CL:0000393!8.32e-07!39;CL:0000211!8.32e-07!39;CL:0000055!9.48e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,2.39e-12,91;CL:0000048,2.39e-12,91;CL:0000034,2.51e-11,97;CL:0000393,1.14e-08,39;CL:0000211,1.14e-08,39;CL:0002321,1.49e-08,70;CL:0000540,2.25e-07,33;CL:0000047,2.25e-07,33;CL:0000031,2.25e-07,33;CL:0000404,2.25e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.17e-07,73 | |||
|phase1_expression=0,0,0.909998478779072,1.81478526784098,4.00716583957078,0.33575854382378,0.700837921786577,7.48915275961142,3.23814060948833,2.57470978954193,1.19852577757853,1.91453181588807,2.73921167889929,2.01066925563694,4.66353666541928,2.42970320867791,7.69518065940961,2.68142840554502,0.685572168028694,3.39511721438424,1.10556277196391,2.28369187762036,1.04479915655574,0.95995453676044,0.68822784320151,0,0,0,2.09025761402011,0,0,19.0509202037889,0.61506478758457,126.785344812351,0.866554859253824,0,0.204169356262369,0,1.5626706890476,1.0470474879476,1.76469446409304,0.683045484958446,1.45653105909346,4.28049181116963,2.23029248682932,0.734187008646726,10.1710874765245,0.218025156380447,2.41654801007919,0.58328969722285,0.419959264876088,0,0.167782606057736,0,0.672187598284928,1.54355661621568,2.29226751951005,3.09403255366465,2.42779753031517,0,0,3.38844532069132,0,5.84934816232909,25.7105254267413,15.6305625288142,14.081205194365,4.2264013585371,1.97010263386108,2.02508907497536,1.68259969081106,3.14216082844184,2.42955395046775,1.46988959057945,0.479227355091182,0,37.4393995397922,2.42605942361857,2.30409799884365,1.71452174049252,0.823388792421687,1.04182674111352,1.3959149950069,29.2636557216474,3.36156145108982,13.5529149317887,1.70846016958924,2.42319279572891,0.605809546665472,0.831287161174641,0.869593466105033,9.46466264679525,4.0798280022465,23.2072372404261,16.8941868536394,4.92829575807069,0.702222100658759,0.170430322578058,0,0,0.14084341977668,1.28326477414318,10.1922095882658,7.11066703153331,1.29894624606728,1.52015919285059,1.01104889002957,2.96878087269556,0,0.445326417194474,2.08182392119363,0.304465478312141,1.38369298353635,0.904335843315735,0.705532242814229,0.879666139307728,0.741584903203122,0.289198713839823,0.884610551949874,0.808834249737046,1.10420759230197,1.45462575940567,1.86391761218122,0,1.04723353406728,0.510914110417183,0.479260498023681,0,0,0.748953197024114,0,0.376963056338593,0.173824320192276,0.767146371990992,0.62336413367868,0.973447578406546,0.81471491080253,0.870848794270651,0.252722758433675,0.210441855886474,0.390361328888111,0.919608417733892,0.180062129805349,0.753524089178575,1.08858398642125,0.640568601424249,0.187403449119458,0.776110112217047,0,0.189106080167819,0,0,1.66828349535359,0,1.23469281844766,0.398068533636986,0,0,1.13665399758237,0.207125772535502,0.938104239924385,1.08037236876609,0.946978942340841,0.983821158737019,1.07986979021165,0.465067889500816,0.536546802799238,0.934122738937356,0.987359099480883,0.820837320395476,0.56748166682099,0.877199924551994,1.3173006917463,2.28150911892632,0.210289948564127,0.617427674275707,1.65209391491899,0.793351699990633,0.213288250535234,1.39342003116263,0.38660238396628,1.81515172161008,0,0.380451252225118,23.7264530772256,0.164698954724011,1.25667604400135,0.795825888164603,0.38992817423824,28.7622210769351,2.37751854862164,2.19055400579804,0.189667900953082,0.799739588268102,0,0.407302655690628,0.387904974335251,0.701358198903186,0.758838445491087,0.295220295959204,0.470996183524124,0.493588655687202,2.07516838961004,0.333690211432188,0,0.899448449539415,1.01430060694251,0,1.01850340712568,0.287696137450811,1.78348749452539,1.37280706594041,53.1942364151212,0.372140947668503,1.87222603868736,1.76805214562978,2.87035861635059,2.41221760681684,1.29327233116623,1.51593129416388,0.325929952884052,0.509235257325564,0.938760993154008,0.335012514883631,0.952174563544055,0.585400943573396,0,0.664394068946325,0.797273843287435,1.47476983244164,1.03610989119537,1.88043776155965,0,1.08781136763742,0.491764273019036,0,0.481651769963376,1.40654023910644,7.21313759657372,1.26235463602186,2.52406575533005,2.34263246577983,3.23135096599198,2.38968797952552,1.78238939265915,8.49229592366497,1.61924280669958,1.75353514746787,4.34816555741176,0,0.141940085208269,0.534196811001766,0.325773918707152,0.494910368917606,2.65490276679926,1.94224508923985,0,0.943025398779491,1.18120757152309,0.922305443831782,0.516856586336442,1.45413491791002,2.13898427030833,2.21225730555071,6.32511651449993,4.12542172992747,0,0.720244376125241,1.55230420539305,1.92903331528433,1.06404140185364,0.356737635204141,1.64549020602121,3.04464949114599,0.469343416127421,1.48282449604674,0.441056796109924,0.49465875882444,0,0.422190474497091,0.596861720015682,1.14898629821543,9.32738677215522,0.18542530201051,0.854354403989263,0.619160603889667,0.370389054739423,1.69531611304222,0.546776910884101,1.14389086603261,0.339956859987711,0.559805809294632,0.414599921413271,0,0.474503990371703,0.406638934253697,0.540026704109006,0.209088296014469,0.655087691238533,0.674321731924103,0.41326727862668,4.4498510137285,0.518459893167171,0,2.25477175473676,0.149516546043979,0.330916980914195,0,1.16243841129958,0.337912250981556,1.05621514781179,1.0416350787516,0.314578033277133,1.20792060413003,0.576060012515731,0,0.810900861160657,1.23253148597793,0.51968329191118,0.537080087002444,0,0.841368146639782,0.886137163047463,0.504832249740738,0.457240839929999,0.705783295957884,0.584747284438515,0.577271049841977,0.584384510907845,0.226730383615211,1.33191572024439,2.06341870201794,0.335769232728157,0.19318959403219,0.375364950902364,0.36630324853453,0.428736758158132,0,3.95326289831947,3.22227665555024,4.58316410751517,2.749650917499,4.7955776383945,3.7769694869485,4.05013500139084,1.35096360967266,1.35942722695261,4.14208249401456,0.830298780673413,0,0.341467211508268,0.729320151204882,0,2.38996560985018,2.44471400581777,1.03017528619447,0.64183841918363,1.51618327058278,1.77435509923168,0.754505365544305,1.21733959710847,1.02440243847791,1.14870937911227,0.476293691283074,0.927074607558844,1.15745532278223,0.824171801606613,0.147198920134397,2.74295401908332,1.06485483695602,1.90748951957857,1.59881058295561,0.941093804153306,0.761531471025089,1.64635175585495,0.789209134313529,2.44447404922551,0.561142271657738,0.593175090620871,1.97008964751127,0,1.39443157067369,0.771626443924566,0.999242311751784,0.467863216890817,0,0.382576664137687,0.661774257358546,0.231867835620421 | |||
|short_description=p@chr13:97960589..97960594,- | |||
}} | |||
Revision as of 01:22, 13 September 2013
| Short description: | p@chr13:97960589..97960594, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr13:97960589..97960594, - |
| Coexpression cluster: | MCL_coexpression_mm9:203 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| somatic stem cell | 2.39e-12 | 91 |
| multi fate stem cell | 2.39e-12 | 91 |
| stem cell | 2.51e-11 | 97 |
| electrically responsive cell | 1.14e-08 | 39 |
| electrically active cell | 1.14e-08 | 39 |
| embryonic cell | 1.49e-08 | 70 |
| neuron | 2.25e-07 | 33 |
| neuronal stem cell | 2.25e-07 | 33 |
| neuroblast | 2.25e-07 | 33 |
| electrically signaling cell | 2.25e-07 | 33 |
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 6.17e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
