FFCP PHASE1:Hg19::chr3:71542684..71542720,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27086|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3823|TSSclassifier=S|UniProt=G5E965|association_with_transcript=0bp_to_ENST00000327590,uc003don.2_5end|coexpression_cluster_id=C18|description=CAGE_peak_18_at_FOXP1_5end|id=chr3:71542684..71542720,-|ontology_enrichment_celltype=CL:0000791!3.98e-22!18;CL:0000789!3.98e-22!18;CL:0002420!3.98e-22!18;CL:0002419!3.98e-22!18;CL:0000790!3.98e-22!18;CL:0000625!8.30e-16!11;CL:0000084!1.21e-15!25;CL:0000827!1.21e-15!25;CL:0000738!3.51e-15!140;CL:0002087!5.24e-13!119;CL:0002031!2.18e-11!124;CL:0000037!2.65e-10!172;CL:0000566!2.65e-10!172;CL:0000624!1.24e-09!6;CL:0000838!1.30e-09!52;CL:0000988!2.58e-09!182;CL:0000542!2.73e-09!53;CL:0000051!2.73e-09!53;CL:0002032!7.77e-09!165;CL:0000837!7.77e-09!165|ontology_enrichment_celltype_v019=CL:0000791;7.40e-51;18!CL:0000789;7.40e-51;18!CL:0002419;7.40e-51;18!CL:0000084;2.71e-35;25!CL:0000625;4.02e-35;11!CL:0000624;1.53e-20;6!CL:0000898;7.16e-11;3!CL:0000542;1.39e-10;53!CL:0000226;1.44e-10;3!CL:0000842;1.44e-10;3!CL:0000623;2.48e-10;3!CL:0000767;1.86e-09;3!CL:0000815;1.26e-07;2!CL:0000792;1.26e-07;2!CL:0002677;1.26e-07;2|ontology_enrichment_celltype_v019_2=CL:0000791,8.01e-51,18;CL:0000789,8.01e-51,18;CL:0002420,8.01e-51,18;CL:0002419,8.01e-51,18;CL:0000790,8.01e-51,18;CL:0000084,2.86e-35,25;CL:0000827,2.86e-35,25;CL:0000625,4.23e-35,11;CL:0000838,9.47e-21,52;CL:0000624,1.59e-20,6;CL:0000542,2.95e-20,53;CL:0000051,2.95e-20,53;CL:0000738,1.22e-14,136;CL:0002087,1.42e-13,115;CL:0000898,7.28e-11,3;CL:0000226,1.44e-10,3;CL:0000842,1.44e-10,3;CL:0000037,2.06e-10,168;CL:0000623,2.40e-10,3;CL:0000825,2.40e-10,3;CL:0000988,1.64e-09,177;CL:0002031,1.97e-09,120;CL:0000767,2.23e-09,3;CL:0002032,1.87e-08,161;CL:0000837,1.87e-08,161;CL:0000815,1.29e-07,2;CL:0000792,1.29e-07,2;CL:0002677,1.29e-07,2|ontology_enrichment_development_v019=CL:0000790;7.40e-51;18!CL:0000051;1.39e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!2.66e-11!15;UBERON:0000179!2.66e-11!15;UBERON:0000463!2.66e-11!15;UBERON:0007023!4.06e-10!115;UBERON:0002193!5.83e-10!112;UBERON:0002390!8.05e-10!102;UBERON:0003061!8.05e-10!102|ontology_enrichment_uberon_v019=UBERON:0000178;5.49e-23;15!UBERON:0000179;5.49e-23;15!UBERON:0000463;5.49e-23;15!UBERON:0002390;4.61e-13;32!UBERON:0002193;6.56e-10;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.14e-23,15;UBERON:0000179,5.14e-23,15;UBERON:0000463,5.14e-23,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,6.1412703695554,1.39334510984468,0,0,0,0,0,0,1.10799081706375,2.60707781711184,5.64228263861215,0.223915474239924,1.6194683300949,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0,0,0.512321413058201,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0,0,0.612167784741805,0.320929027076094,0,0,0.598390972864896,0.426224750532694,0,0,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0.382273228125229,0,3.36305137788922,0,40.9156321836773,23.1876350022007,20.1489469019519,1.33749196312542,15.6442687984123,21.305151258063,19.4826728407911,3.11949279278486,9.42738903919479,6.20294904834139,12.9985854607207,0.512365278902701,0.780356085359269,5.75532666112866,6.07970039128866,6.66547097190621,18.9806800847437,27.2891644651507,17.7710390468461,1.58633079776593,22.2267886289114,18.2122546105794,21.5066738216577,10.1940932583711,12.370585623272,10.4549724889321,15.3586621459328,17.7901389504642,21.2382235138988,14.680189626729,11.4957919568947,18.9510338631248,13.3720097891754,20.5650653513575,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0,0.348259474598534,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.836691811106,7.76259269494262,8.2139543219039,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0,15.7143699853394,9.92285323765637,10.1391179913272,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56702848308952,3.82318603571188,2.27858874869665,4.52640373369799,8.2272454617238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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27086 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |||
|TSSclassifier=S | |||
|UniProt=G5E965 | |||
|association_with_transcript=0bp_to_ENST00000327590,uc003don.2_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_18_at_FOXP1_5end | |||
|id=chr3:71542684..71542720,- | |||
|ontology_enrichment_celltype=CL:0000791!3.98e-22!18;CL:0000789!3.98e-22!18;CL:0002420!3.98e-22!18;CL:0002419!3.98e-22!18;CL:0000790!3.98e-22!18;CL:0000625!8.30e-16!11;CL:0000084!1.21e-15!25;CL:0000827!1.21e-15!25;CL:0000738!3.51e-15!140;CL:0002087!5.24e-13!119;CL:0002031!2.18e-11!124;CL:0000037!2.65e-10!172;CL:0000566!2.65e-10!172;CL:0000624!1.24e-09!6;CL:0000838!1.30e-09!52;CL:0000988!2.58e-09!182;CL:0000542!2.73e-09!53;CL:0000051!2.73e-09!53;CL:0002032!7.77e-09!165;CL:0000837!7.77e-09!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.40e-51;18!CL:0000789;7.40e-51;18!CL:0002419;7.40e-51;18!CL:0000084;2.71e-35;25!CL:0000625;4.02e-35;11!CL:0000624;1.53e-20;6!CL:0000898;7.16e-11;3!CL:0000542;1.39e-10;53!CL:0000226;1.44e-10;3!CL:0000842;1.44e-10;3!CL:0000623;2.48e-10;3!CL:0000767;1.86e-09;3!CL:0000815;1.26e-07;2!CL:0000792;1.26e-07;2!CL:0002677;1.26e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.01e-51,18;CL:0000789,8.01e-51,18;CL:0002420,8.01e-51,18;CL:0002419,8.01e-51,18;CL:0000790,8.01e-51,18;CL:0000084,2.86e-35,25;CL:0000827,2.86e-35,25;CL:0000625,4.23e-35,11;CL:0000838,9.47e-21,52;CL:0000624,1.59e-20,6;CL:0000542,2.95e-20,53;CL:0000051,2.95e-20,53;CL:0000738,1.22e-14,136;CL:0002087,1.42e-13,115;CL:0000898,7.28e-11,3;CL:0000226,1.44e-10,3;CL:0000842,1.44e-10,3;CL:0000037,2.06e-10,168;CL:0000623,2.40e-10,3;CL:0000825,2.40e-10,3;CL:0000988,1.64e-09,177;CL:0002031,1.97e-09,120;CL:0000767,2.23e-09,3;CL:0002032,1.87e-08,161;CL:0000837,1.87e-08,161;CL:0000815,1.29e-07,2;CL:0000792,1.29e-07,2;CL:0002677,1.29e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;7.40e-51;18!CL:0000051;1.39e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.66e-11!15;UBERON:0000179!2.66e-11!15;UBERON:0000463!2.66e-11!15;UBERON:0007023!4.06e-10!115;UBERON:0002193!5.83e-10!112;UBERON:0002390!8.05e-10!102;UBERON:0003061!8.05e-10!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.49e-23;15!UBERON:0000179;5.49e-23;15!UBERON:0000463;5.49e-23;15!UBERON:0002390;4.61e-13;32!UBERON:0002193;6.56e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.14e-23,15;UBERON:0000179,5.14e-23,15;UBERON:0000463,5.14e-23,15 | |||
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|short_description=p18@FOXP1 | |||
}} |
Revision as of 01:19, 13 September 2013
Short description: | p18@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_FOXP1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000327590, uc003don.2_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | G5E965 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.01e-51 | 18 |
alpha-beta T cell | 8.01e-51 | 18 |
immature T cell | 8.01e-51 | 18 |
mature T cell | 8.01e-51 | 18 |
immature alpha-beta T cell | 8.01e-51 | 18 |
T cell | 2.86e-35 | 25 |
pro-T cell | 2.86e-35 | 25 |
CD8-positive, alpha-beta T cell | 4.23e-35 | 11 |
lymphoid lineage restricted progenitor cell | 9.47e-21 | 52 |
CD4-positive, alpha-beta T cell | 1.59e-20 | 6 |
lymphocyte | 2.95e-20 | 53 |
common lymphoid progenitor | 2.95e-20 | 53 |
leukocyte | 1.22e-14 | 136 |
nongranular leukocyte | 1.42e-13 | 115 |
naive T cell | 7.28e-11 | 3 |
single nucleate cell | 1.44e-10 | 3 |
mononuclear cell | 1.44e-10 | 3 |
hematopoietic stem cell | 2.06e-10 | 168 |
natural killer cell | 2.40e-10 | 3 |
pro-NK cell | 2.40e-10 | 3 |
hematopoietic cell | 1.64e-09 | 177 |
hematopoietic lineage restricted progenitor cell | 1.97e-09 | 120 |
basophil | 2.23e-09 | 3 |
hematopoietic oligopotent progenitor cell | 1.87e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-08 | 161 |
regulatory T cell | 1.29e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.29e-07 | 2 |
naive regulatory T cell | 1.29e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.14e-23 | 15 |
haemolymphatic fluid | 5.14e-23 | 15 |
organism substance | 5.14e-23 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.