FFCP PHASE1:Hg19::chr3:69985792..69985803,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4286|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7105|TSSclassifier=S|UniProt=|association_with_transcript=12bp_to_ENST00000394348_5end|coexpression_cluster_id=C58|description=CAGE_peak_7_at_MITF_5end|id=chr3:69985792..69985803,+|ontology_enrichment_celltype=CL:0000148!7.41e-58!10;CL:0000541!7.41e-58!10;CL:0000147!4.29e-41!14;CL:0000710!1.67e-28!20;CL:0002567!3.27e-28!3;CL:0000075!7.14e-21!27;CL:0002077!6.67e-17!33;CL:0000453!1.41e-16!5;CL:0000325!3.77e-14!39;CL:0000333!9.67e-13!41;CL:0002566!8.14e-11!1;CL:0000990!1.84e-09!8;CL:0000133!1.11e-08!59;CL:0002274!5.61e-08!5;CL:0000457!5.61e-08!5;CL:0002191!5.61e-08!5;CL:0000097!5.61e-08!5;CL:0000831!5.61e-08!5;CL:0002028!5.61e-08!5;CL:0000451!7.83e-08!10;CL:0000221!4.38e-07!71|ontology_enrichment_celltype_v019=CL:0000148;2.69e-87;10!CL:0000147;2.24e-62;14!CL:0002567;1.02e-53;3!CL:0000710;1.16e-43;20!CL:0000075;2.53e-32;27!CL:0002077;1.22e-22;34!CL:0002566;1.30e-19;1|ontology_enrichment_celltype_v019_2=CL:0000148,2.52e-87,10;CL:0000541,2.52e-87,10;CL:0000147,2.14e-62,14;CL:0002567,9.35e-54,3;CL:0000710,1.12e-43,20;CL:0000075,2.47e-32,27;CL:0002077,1.19e-25,34;CL:0000333,3.04e-20,41;CL:0002566,1.30e-19,1;CL:0000133,3.39e-14,59;CL:0000221,1.20e-11,72|ontology_enrichment_development_v019=CL:0000133;6.56e-08;59!UBERON:0003056;2.79e-07;3|ontology_enrichment_disease=DOID:1909!7.08e-20!2|ontology_enrichment_disease_v019=DOID:1909;2.27e-37;2|ontology_enrichment_disease_v019_2=DOID:1909,2.27e-37,2|ontology_enrichment_uberon=UBERON:0000989!2.08e-10!1;UBERON:0008811!2.08e-10!1;UBERON:0006258!2.08e-10!1;UBERON:0005876!2.08e-10!1;UBERON:0004874!2.08e-10!1;UBERON:0007029!2.28e-10!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,36.1937997465363,12.2236296178649,8.20522130470329,1.71072446022705,13.3675740514321,28.5325904951722,38.3007419724975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.9408408573705,37.3959586943907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.865106333325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@MITF}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4286 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000394348_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_7_at_MITF_5end | |||
|id=chr3:69985792..69985803,+ | |||
|ontology_enrichment_celltype=CL:0000148!7.41e-58!10;CL:0000541!7.41e-58!10;CL:0000147!4.29e-41!14;CL:0000710!1.67e-28!20;CL:0002567!3.27e-28!3;CL:0000075!7.14e-21!27;CL:0002077!6.67e-17!33;CL:0000453!1.41e-16!5;CL:0000325!3.77e-14!39;CL:0000333!9.67e-13!41;CL:0002566!8.14e-11!1;CL:0000990!1.84e-09!8;CL:0000133!1.11e-08!59;CL:0002274!5.61e-08!5;CL:0000457!5.61e-08!5;CL:0002191!5.61e-08!5;CL:0000097!5.61e-08!5;CL:0000831!5.61e-08!5;CL:0002028!5.61e-08!5;CL:0000451!7.83e-08!10;CL:0000221!4.38e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.69e-87;10!CL:0000147;2.24e-62;14!CL:0002567;1.02e-53;3!CL:0000710;1.16e-43;20!CL:0000075;2.53e-32;27!CL:0002077;1.22e-22;34!CL:0002566;1.30e-19;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.52e-87,10;CL:0000541,2.52e-87,10;CL:0000147,2.14e-62,14;CL:0002567,9.35e-54,3;CL:0000710,1.12e-43,20;CL:0000075,2.47e-32,27;CL:0002077,1.19e-25,34;CL:0000333,3.04e-20,41;CL:0002566,1.30e-19,1;CL:0000133,3.39e-14,59;CL:0000221,1.20e-11,72 | |||
|ontology_enrichment_development_v019=CL:0000133;6.56e-08;59!UBERON:0003056;2.79e-07;3 | |||
|ontology_enrichment_disease=DOID:1909!7.08e-20!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.27e-37;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.27e-37,2 | |||
|ontology_enrichment_uberon=UBERON:0000989!2.08e-10!1;UBERON:0008811!2.08e-10!1;UBERON:0006258!2.08e-10!1;UBERON:0005876!2.08e-10!1;UBERON:0004874!2.08e-10!1;UBERON:0007029!2.28e-10!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,36.1937997465363,12.2236296178649,8.20522130470329,1.71072446022705,13.3675740514321,28.5325904951722,38.3007419724975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.9408408573705,37.3959586943907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.865106333325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@MITF | |||
}} |
Revision as of 01:17, 13 September 2013
Short description: | p7@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_MITF_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 12bp_to_ENST00000394348_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.52e-87 | 10 |
melanoblast | 2.52e-87 | 10 |
pigment cell | 2.14e-62 | 14 |
light melanocyte | 9.35e-54 | 3 |
neurecto-epithelial cell | 1.12e-43 | 20 |
columnar/cuboidal epithelial cell | 2.47e-32 | 27 |
ecto-epithelial cell | 1.19e-25 | 34 |
migratory neural crest cell | 3.04e-20 | 41 |
dark melanocyte | 1.30e-19 | 1 |
neurectodermal cell | 3.39e-14 | 59 |
ectodermal cell | 1.20e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.27e-37 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.