FFCP PHASE1:Mm9::chr13:83711523..83711548,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=169|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:83711523..83711548,+|id=chr13:83711523..83711548,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,9.23e-16,32;CL:0002032,9.23e-16,32;CL:0000037,9.23e-16,32;CL:0000837,9.23e-16,32;CL:0000049,1.29e-15,19;CL:0002320,2.63e-12,46;CL:0000134,2.63e-12,46;CL:0000034,5.35e-12,97;CL:0000219,3.74e-10,54;CL:0000723,1.67e-08,91;CL:0000048,1.67e-08,91;CL:0000763,3.39e-08,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.91e-13,3;DOID:4045,2.91e-13,3;DOID:0050686,7.45e-07,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.63e-12,46;UBERON:0002204,1.01e-08,32;UBERON:0002371,3.39e-08,16|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,1.10411757875383,1.23402990245165,2.12194825899015,0.0850432901510698,1.58865521921416,2.08959831311148,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,24.6933662134776,11.720030167857,4.71171369576418,47.0585190424811,14.3439551841274,9.71020706062307,0,0,0,0,0,0,0,0,0,8.38913030288682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,13.1796636956512,14.9975682748352,7.75128385145695,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.72434506044558,4.11756651383544,1.98914449576915,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.243206428637567,0.292399974850665,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0.387904974335251,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.457556346413045,14.6181449794716,17.4939315404573,9.95039811391851,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p@chr13:83711523..83711548,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=169 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:83711523..83711548,+ | |||
|id=chr13:83711523..83711548,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.23e-16,32;CL:0002032,9.23e-16,32;CL:0000037,9.23e-16,32;CL:0000837,9.23e-16,32;CL:0000049,1.29e-15,19;CL:0002320,2.63e-12,46;CL:0000134,2.63e-12,46;CL:0000034,5.35e-12,97;CL:0000219,3.74e-10,54;CL:0000723,1.67e-08,91;CL:0000048,1.67e-08,91;CL:0000763,3.39e-08,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.91e-13,3;DOID:4045,2.91e-13,3;DOID:0050686,7.45e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.63e-12,46;UBERON:0002204,1.01e-08,32;UBERON:0002371,3.39e-08,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,1.10411757875383,1.23402990245165,2.12194825899015,0.0850432901510698,1.58865521921416,2.08959831311148,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,24.6933662134776,11.720030167857,4.71171369576418,47.0585190424811,14.3439551841274,9.71020706062307,0,0,0,0,0,0,0,0,0,8.38913030288682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,13.1796636956512,14.9975682748352,7.75128385145695,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.72434506044558,4.11756651383544,1.98914449576915,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.243206428637567,0.292399974850665,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0.387904974335251,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.457556346413045,14.6181449794716,17.4939315404573,9.95039811391851,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:83711523..83711548,+ | |||
}} |
Revision as of 01:11, 13 September 2013
Short description: | p@chr13:83711523..83711548, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:83711523..83711548, + |
Coexpression cluster: | MCL_coexpression_mm9:169 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.23e-16 | 32 |
hematopoietic oligopotent progenitor cell | 9.23e-16 | 32 |
hematopoietic stem cell | 9.23e-16 | 32 |
hematopoietic multipotent progenitor cell | 9.23e-16 | 32 |
common myeloid progenitor | 1.29e-15 | 19 |
connective tissue cell | 2.63e-12 | 46 |
mesenchymal cell | 2.63e-12 | 46 |
stem cell | 5.35e-12 | 97 |
motile cell | 3.74e-10 | 54 |
somatic stem cell | 1.67e-08 | 91 |
multi fate stem cell | 1.67e-08 | 91 |
myeloid cell | 3.39e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.63e-12 | 46 |
musculoskeletal system | 1.01e-08 | 32 |
bone marrow | 3.39e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.91e-13 | 3 |
muscle cancer | 2.91e-13 | 3 |
organ system cancer | 7.45e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.