FFCP PHASE1:Hg19::chr3:62573093..62573109,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:62573093..62573109,+|id=chr3:62573093..62573109,+|ontology_enrichment_celltype=CL:0002368!4.34e-13!13;CL:0002139!5.97e-10!24;CL:0000071!8.74e-10!18;CL:0002546!8.74e-10!18;CL:0002076!1.96e-09!43;CL:0002551!3.50e-09!6;CL:0000220!1.34e-08!246;CL:0002321!1.96e-08!248;CL:1000413!3.05e-08!9;CL:0000068!5.42e-08!3;CL:0000069!5.42e-08!3;CL:0000307!5.42e-08!3;CL:0000377!5.42e-08!3;CL:0002371!6.78e-08!591;CL:0000223!1.37e-07!59;CL:0002621!2.30e-07!3;CL:0000115!3.30e-07!35;CL:0002618!7.58e-07!3|ontology_enrichment_celltype_v019=CL:0000307;2.59e-12;3!CL:0002368;3.21e-11;13!CL:0002149;8.48e-07;6!CL:0002569;8.48e-07;6!CL:0002255;8.48e-07;6|ontology_enrichment_celltype_v019_2=CL:0000068,2.59e-12,3;CL:0000069,2.59e-12,3;CL:0000307,2.59e-12,3;CL:0000377,2.59e-12,3;CL:0002368,3.21e-11,13;CL:0002076,7.40e-08,42;CL:0002149,7.58e-07,6;CL:0002255,7.58e-07,6;CL:0002569,8.97e-07,6|ontology_enrichment_development_v019=CL:0000377;2.59e-12;3!UBERON:0007123;6.55e-08;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3001;8.48e-07;6|ontology_enrichment_disease_v019_2=DOID:3001,7.58e-07,6|ontology_enrichment_uberon=UBERON:0001986!8.74e-10!18;UBERON:0004638!8.74e-10!18;UBERON:0004852!8.74e-10!18;UBERON:0001828!4.08e-09!8;UBERON:0003915!3.05e-08!9;UBERON:0004700!3.05e-08!9;UBERON:0001917!3.05e-08!9;UBERON:0000487!1.31e-07!22;UBERON:0001949!2.30e-07!3;UBERON:0003102!6.32e-07!95;UBERON:0000490!6.66e-07!138|ontology_enrichment_uberon_v019=UBERON:0002046;6.55e-08;5!UBERON:0003422;8.48e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002046,6.13e-08,5;UBERON:0004117,6.13e-08,5;UBERON:0007689,6.13e-08,5;UBERON:0007123,6.13e-08,5;UBERON:0003091,6.13e-08,5;UBERON:0003422,8.97e-07,6|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0.838998872419812,0.275118041940067,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.900891843866578,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0.624320153660641,0,0.448346041655403,0.469737994575059,0.323745888736263,0.561803226808994,0.204154171254893,0.61417158655884,0.206651562351531,0,0,0,0,0.505008341862199,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0.337552664482532,0,0,0,0,0.355009592516614,0,0,0.773043412653187,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0,0,0.257207374262142,0,0.266422179016099,0,1.08524321078289,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0,0,0.537101224341368,0,0.255679882248303,0,0.826424576804891,0.960950336825531,4.08360679982669,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0.865999014529609,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685209623233754,0.19871461170299,0,0,0.480952921509202,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818859587550484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:62573093..62573109,+ | |||
|id=chr3:62573093..62573109,+ | |||
|ontology_enrichment_celltype=CL:0002368!4.34e-13!13;CL:0002139!5.97e-10!24;CL:0000071!8.74e-10!18;CL:0002546!8.74e-10!18;CL:0002076!1.96e-09!43;CL:0002551!3.50e-09!6;CL:0000220!1.34e-08!246;CL:0002321!1.96e-08!248;CL:1000413!3.05e-08!9;CL:0000068!5.42e-08!3;CL:0000069!5.42e-08!3;CL:0000307!5.42e-08!3;CL:0000377!5.42e-08!3;CL:0002371!6.78e-08!591;CL:0000223!1.37e-07!59;CL:0002621!2.30e-07!3;CL:0000115!3.30e-07!35;CL:0002618!7.58e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000307;2.59e-12;3!CL:0002368;3.21e-11;13!CL:0002149;8.48e-07;6!CL:0002569;8.48e-07;6!CL:0002255;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.59e-12,3;CL:0000069,2.59e-12,3;CL:0000307,2.59e-12,3;CL:0000377,2.59e-12,3;CL:0002368,3.21e-11,13;CL:0002076,7.40e-08,42;CL:0002149,7.58e-07,6;CL:0002255,7.58e-07,6;CL:0002569,8.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000377;2.59e-12;3!UBERON:0007123;6.55e-08;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,7.58e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001986!8.74e-10!18;UBERON:0004638!8.74e-10!18;UBERON:0004852!8.74e-10!18;UBERON:0001828!4.08e-09!8;UBERON:0003915!3.05e-08!9;UBERON:0004700!3.05e-08!9;UBERON:0001917!3.05e-08!9;UBERON:0000487!1.31e-07!22;UBERON:0001949!2.30e-07!3;UBERON:0003102!6.32e-07!95;UBERON:0000490!6.66e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;6.55e-08;5!UBERON:0003422;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,6.13e-08,5;UBERON:0004117,6.13e-08,5;UBERON:0007689,6.13e-08,5;UBERON:0007123,6.13e-08,5;UBERON:0003091,6.13e-08,5;UBERON:0003422,8.97e-07,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0.838998872419812,0.275118041940067,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.900891843866578,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0.624320153660641,0,0.448346041655403,0.469737994575059,0.323745888736263,0.561803226808994,0.204154171254893,0.61417158655884,0.206651562351531,0,0,0,0,0.505008341862199,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0.337552664482532,0,0,0,0,0.355009592516614,0,0,0.773043412653187,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0,0,0.257207374262142,0,0.266422179016099,0,1.08524321078289,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0,0,0.537101224341368,0,0.255679882248303,0,0.826424576804891,0.960950336825531,4.08360679982669,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0.865999014529609,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685209623233754,0.19871461170299,0,0,0.480952921509202,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818859587550484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45771421354797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:62573093..62573109,+ | |||
}} |
Revision as of 01:08, 13 September 2013
Short description: | p@chr3:62573093..62573109, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:62573093..62573109, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.59e-12 | 3 |
branched duct epithelial cell | 2.59e-12 | 3 |
tracheal epithelial cell | 2.59e-12 | 3 |
tracheoblast | 2.59e-12 | 3 |
respiratory epithelial cell | 3.21e-11 | 13 |
endo-epithelial cell | 7.40e-08 | 42 |
epithelial cell of uterus | 7.58e-07 | 6 |
stromal cell of endometrium | 7.58e-07 | 6 |
mesenchymal stem cell of umbilical cord | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 6.13e-08 | 5 |
pharyngeal pouch | 6.13e-08 | 5 |
thyroid diverticulum | 6.13e-08 | 5 |
pharyngeal pouch 2 | 6.13e-08 | 5 |
thyroid primordium | 6.13e-08 | 5 |
mesenchyme of umbilical cord | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 7.58e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.