FFCP PHASE1:Mm9::chr13:64263104..64263140,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56541|HGNC=|MCL_coexpression_id=0|UniProt=E9QKB2,Q3UJC1,Q9JKS5|association_with_transcript=-33bp_to_ENSMUST00000021929,NM_019986,uc011zaz.1_5end|description=CAGE_peak_3_at_Habp4_5end|id=chr13:64263104..64263140,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,9.09e-08,3;CL:0002614,1.24e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.80e-15!52;UBERON:0005068!1.80e-15!52;UBERON:0006241!1.80e-15!52;UBERON:0007135!1.80e-15!52;UBERON:0000955!4.90e-15!50;UBERON:0006238!4.90e-15!50;UBERON:0002616!1.36e-14!49;UBERON:0000073!8.92e-14!75;UBERON:0001016!8.92e-14!75;UBERON:0001017!1.06e-13!73;UBERON:0005743!1.06e-13!73;UBERON:0002346!9.99e-13!71;UBERON:0003075!9.99e-13!71;UBERON:0007284!9.99e-13!71;UBERON:0000033!9.56e-12!63;UBERON:0000025!4.74e-11!114;UBERON:0002020!5.08e-11!34;UBERON:0003080!1.23e-10!40;UBERON:0004121!1.66e-10!102;UBERON:0000924!1.66e-10!102;UBERON:0006601!1.66e-10!102;UBERON:0004111!1.77e-10!122;UBERON:0002780!4.92e-10!39;UBERON:0001890!4.92e-10!39;UBERON:0006240!4.92e-10!39;UBERON:0003056!3.53e-09!49;UBERON:0002791!4.73e-09!29;UBERON:0003528!4.73e-09!29;UBERON:0001893!4.73e-09!29;UBERON:0002021!1.66e-07!10;UBERON:0000411!1.66e-07!10;UBERON:0001950!1.66e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.81e-27,54;UBERON:0001049,6.46e-24,52;UBERON:0005068,6.46e-24,52;UBERON:0006241,6.46e-24,52;UBERON:0007135,6.46e-24,52;UBERON:0002616,7.00e-21,46;UBERON:0002021,1.23e-20,10;UBERON:0000411,1.23e-20,10;UBERON:0001950,1.23e-20,10;UBERON:0000955,2.55e-20,47;UBERON:0006238,2.55e-20,47;UBERON:0001017,4.07e-20,73;UBERON:0001016,2.11e-19,75;UBERON:0002346,2.81e-18,64;UBERON:0003075,2.81e-18,64;UBERON:0007284,2.81e-18,64;UBERON:0002020,2.94e-17,34;UBERON:0003528,4.16e-16,29;UBERON:0002791,4.16e-16,29;UBERON:0001893,4.16e-16,29;UBERON:0003080,6.07e-16,40;UBERON:0010371,2.86e-15,73;UBERON:0002780,1.88e-14,39;UBERON:0001890,1.88e-14,39;UBERON:0006240,1.88e-14,39;UBERON:0004121,6.59e-14,95;UBERON:0000924,6.59e-14,95;UBERON:0006601,6.59e-14,95;UBERON:0002619,1.35e-13,17;UBERON:0000956,1.14e-12,21;UBERON:0001869,1.14e-12,21;UBERON:0000203,1.14e-12,21;UBERON:0003056,3.40e-12,49;UBERON:0010314,7.23e-11,92;UBERON:0002950,8.02e-10,4;UBERON:0001891,8.02e-10,4;UBERON:0009616,8.02e-10,4;UBERON:0010286,8.02e-10,4;UBERON:0003076,7.90e-09,12;UBERON:0003057,7.90e-09,12;UBERON:0000025,1.92e-08,114;UBERON:0004684,9.09e-08,3;UBERON:0002275,9.09e-08,3;UBERON:0002038,1.24e-07,3;UBERON:0009663,1.24e-07,3;UBERON:0009661,1.24e-07,3;UBERON:0000125,1.24e-07,3;UBERON:0002308,1.24e-07,3;UBERON:0004111,1.71e-07,122|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0.342401459862411,0.174840804837995,0,0,0,0,0,0,47.539199194448,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0.65407546914134,0.439372365468944,0,0.279972843250725,0,0,0,0.336093799142464,0.257259436035947,0,0,0.606949382578793,0.528990979272033,0,0,1.77858959222228,0,0,0,0.599200221036809,0,0.207379224616955,0.270011876663381,0,2.28520787523043,0.883474163806454,0.244981598429908,0.287536413054709,0,1.10115880999389,5.36286819957788,3.99376986466233,0.527545150920775,0.731901148819277,0,3.62937898701795,1.68828783009504,3.36156145108982,2.35702868378934,0.996601765593721,0.186399445825301,0.37863096666592,0.0755715601067855,0.289864488701678,0,0,0.539703191637817,0,0,3.93244376368905,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,6.50848114398642,0,0.29688427812965,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,0,2.34224637609238,1.04723353406728,0,0,0,0,3.89455662452539,1.83000241127451,0.502617408451458,1.73824320192276,2.30143911597297,3.53239675751252,1.62241263067758,0.407357455401265,0.124406970610093,1.26361379216837,0.210441855886474,0.520481771850815,0.229902104433473,0.180062129805349,0,0.272145996605311,0,0.187403449119458,0,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0.473489471170421,0.590292695242212,0.771335564436891,0,0.804820204198858,0.467061369468678,0.822799249567402,0.164167464079095,0.243206428637567,0.438599962275997,0.219550115291051,0.402619256281115,1.05144974282064,0.617427674275707,0,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,0.403367049246685,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,1.1270773567308,0,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0.296452627087149,0.500535317148282,0,0,0.202860121388503,0,0,0,0,0,0,0.744281895337007,0,0.505157755894224,0.358794827043824,0,0.184753190166605,0,0,0,0.704070744865506,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,4.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| ||
|EntrezGene=56541 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=E9QKB2,Q3UJC1,Q9JKS5 | |||
|association_with_transcript=-33bp_to_ENSMUST00000021929,NM_019986,uc011zaz.1_5end | |||
|description=CAGE_peak_3_at_Habp4_5end | |||
|id=chr13:64263104..64263140,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,9.09e-08,3;CL:0002614,1.24e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.80e-15!52;UBERON:0005068!1.80e-15!52;UBERON:0006241!1.80e-15!52;UBERON:0007135!1.80e-15!52;UBERON:0000955!4.90e-15!50;UBERON:0006238!4.90e-15!50;UBERON:0002616!1.36e-14!49;UBERON:0000073!8.92e-14!75;UBERON:0001016!8.92e-14!75;UBERON:0001017!1.06e-13!73;UBERON:0005743!1.06e-13!73;UBERON:0002346!9.99e-13!71;UBERON:0003075!9.99e-13!71;UBERON:0007284!9.99e-13!71;UBERON:0000033!9.56e-12!63;UBERON:0000025!4.74e-11!114;UBERON:0002020!5.08e-11!34;UBERON:0003080!1.23e-10!40;UBERON:0004121!1.66e-10!102;UBERON:0000924!1.66e-10!102;UBERON:0006601!1.66e-10!102;UBERON:0004111!1.77e-10!122;UBERON:0002780!4.92e-10!39;UBERON:0001890!4.92e-10!39;UBERON:0006240!4.92e-10!39;UBERON:0003056!3.53e-09!49;UBERON:0002791!4.73e-09!29;UBERON:0003528!4.73e-09!29;UBERON:0001893!4.73e-09!29;UBERON:0002021!1.66e-07!10;UBERON:0000411!1.66e-07!10;UBERON:0001950!1.66e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.81e-27,54;UBERON:0001049,6.46e-24,52;UBERON:0005068,6.46e-24,52;UBERON:0006241,6.46e-24,52;UBERON:0007135,6.46e-24,52;UBERON:0002616,7.00e-21,46;UBERON:0002021,1.23e-20,10;UBERON:0000411,1.23e-20,10;UBERON:0001950,1.23e-20,10;UBERON:0000955,2.55e-20,47;UBERON:0006238,2.55e-20,47;UBERON:0001017,4.07e-20,73;UBERON:0001016,2.11e-19,75;UBERON:0002346,2.81e-18,64;UBERON:0003075,2.81e-18,64;UBERON:0007284,2.81e-18,64;UBERON:0002020,2.94e-17,34;UBERON:0003528,4.16e-16,29;UBERON:0002791,4.16e-16,29;UBERON:0001893,4.16e-16,29;UBERON:0003080,6.07e-16,40;UBERON:0010371,2.86e-15,73;UBERON:0002780,1.88e-14,39;UBERON:0001890,1.88e-14,39;UBERON:0006240,1.88e-14,39;UBERON:0004121,6.59e-14,95;UBERON:0000924,6.59e-14,95;UBERON:0006601,6.59e-14,95;UBERON:0002619,1.35e-13,17;UBERON:0000956,1.14e-12,21;UBERON:0001869,1.14e-12,21;UBERON:0000203,1.14e-12,21;UBERON:0003056,3.40e-12,49;UBERON:0010314,7.23e-11,92;UBERON:0002950,8.02e-10,4;UBERON:0001891,8.02e-10,4;UBERON:0009616,8.02e-10,4;UBERON:0010286,8.02e-10,4;UBERON:0003076,7.90e-09,12;UBERON:0003057,7.90e-09,12;UBERON:0000025,1.92e-08,114;UBERON:0004684,9.09e-08,3;UBERON:0002275,9.09e-08,3;UBERON:0002038,1.24e-07,3;UBERON:0009663,1.24e-07,3;UBERON:0009661,1.24e-07,3;UBERON:0000125,1.24e-07,3;UBERON:0002308,1.24e-07,3;UBERON:0004111,1.71e-07,122 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0.342401459862411,0.174840804837995,0,0,0,0,0,0,47.539199194448,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0.65407546914134,0.439372365468944,0,0.279972843250725,0,0,0,0.336093799142464,0.257259436035947,0,0,0.606949382578793,0.528990979272033,0,0,1.77858959222228,0,0,0,0.599200221036809,0,0.207379224616955,0.270011876663381,0,2.28520787523043,0.883474163806454,0.244981598429908,0.287536413054709,0,1.10115880999389,5.36286819957788,3.99376986466233,0.527545150920775,0.731901148819277,0,3.62937898701795,1.68828783009504,3.36156145108982,2.35702868378934,0.996601765593721,0.186399445825301,0.37863096666592,0.0755715601067855,0.289864488701678,0,0,0.539703191637817,0,0,3.93244376368905,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,6.50848114398642,0,0.29688427812965,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,0,2.34224637609238,1.04723353406728,0,0,0,0,3.89455662452539,1.83000241127451,0.502617408451458,1.73824320192276,2.30143911597297,3.53239675751252,1.62241263067758,0.407357455401265,0.124406970610093,1.26361379216837,0.210441855886474,0.520481771850815,0.229902104433473,0.180062129805349,0,0.272145996605311,0,0.187403449119458,0,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0.473489471170421,0.590292695242212,0.771335564436891,0,0.804820204198858,0.467061369468678,0.822799249567402,0.164167464079095,0.243206428637567,0.438599962275997,0.219550115291051,0.402619256281115,1.05144974282064,0.617427674275707,0,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,0.403367049246685,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,1.1270773567308,0,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0.296452627087149,0.500535317148282,0,0,0.202860121388503,0,0,0,0,0,0,0.744281895337007,0,0.505157755894224,0.358794827043824,0,0.184753190166605,0,0,0,0.704070744865506,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,4.0137647496948,4.57125577709592,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0.642642632843614,0,0.534196811001766,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.900305470156551,0,0.214337035031592,0.354680467284547,0,0.329098041204242,0.304464949114599,0,0.42366414172764,0.220528398054962,0,0,0.241251699712623,0,0.164140899745061,0,3.8939313422207,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,0.259229946583586,0,283.537548158148,0.299033092087958,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.58678619322877,0.2604087696879,0.209718688851422,1.44950472495604,92.4576320087748,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.192423683280659,0,0,0.221985953374065,0,0.167884616364078,0,0,0.183151624267265,0.428736758158132,0.501572104035363,2.25900737046827,2.30162618253588,2.29158205375759,1.54667864109319,1.37016503954128,4.5323633843382,2.70009000092722,1.80128481289688,2.26571204492102,1.03552062350364,0.103787347584177,0,0,0.729320151204882,0.209613162627982,0,0.44449345560323,0.618105171716683,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.384150914429216,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.470546902076653,0.169229215783353,0.182927972872773,0,0,0,0.474540072496697,0.689531376628944,1.22769312950907,0.309873682371932,0.192906610981141,0.249810577937946,0.935726433781634,0,0.191288332068843,0,0 | |||
|short_description=p3@Habp4 | |||
}} |
Revision as of 01:00, 13 September 2013
Short description: | p3@Habp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Habp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -33bp_to_ENSMUST00000021929, NM_019986, uc011zaz.1_5end |
EntrezGene: | Habp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 9.09e-08 | 3 |
neuron of the substantia nigra | 1.24e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.