FFCP PHASE1:Mm9::chr13:56175406..56175420,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=115|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:56175406..56175420,-|id=chr13:56175406..56175420,-|ontology_enrichment_celltype=CL:0000034!1.12e-07!97;CL:0000723!1.28e-07!91;CL:0000048!1.28e-07!91|ontology_enrichment_celltype_v019_2=CL:0000034,1.11e-07,97;CL:0000723,1.26e-07,91;CL:0000048,1.26e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=13.2923543096979,1.74487703819681,2.27499619694768,1.51232105653415,2.50447864973174,1.84667199103079,1.86890112476421,12.6540856972745,9.85521055061667,6.78787126333781,10.2730780935303,11.4871908953284,11.641649635322,13.5501623749446,2.6648780945253,3.44207954562704,5.59649502502517,11.0411757875383,7.95263714913285,8.06340338416257,6.63337663178344,149.13500870373,76.0091386394302,7.67963629408352,11.2410547722913,2.8711598205751,3.87685796543167,4.30942465371778,9.5011709728187,4.53654233567875,11.3082560434205,0,0,0,11.554064790051,17.6208724080002,15.7210404322024,25.5304294749514,32.0347491254758,16.7527598071615,25.8821854733646,24.589637458504,11.6522484727477,7.30201544258348,5.98123894195136,5.50640256485045,3.12956537739216,10.247182349881,5.93152693383074,5.8328969722285,13.0187372111587,11.5002051491977,12.080347636157,10.1550699881588,10.0828139742739,6.17422646486273,5.15760191889762,4.12537673821954,11.7343547298567,21.1596391708813,8.23980824558033,5.76035704517525,8.00365316500025,16.6481447697059,19.7773272513395,10.6572017241915,11.085204089181,13.0634223809329,10.5763404554647,24.436074838036,15.7743721013537,5.42736870367227,8.83474163806454,11.7591167246356,16.1020391310637,21.1420320920305,12.1127469099328,4.97980618532232,4.14737639791857,9.62769900430415,18.2060410768795,9.89735404057844,7.2587579740359,12.380777420697,9.77908785771585,3.24091444021034,10.1083893367363,10.2519695203915,6.81535739998656,4.53429360640713,4.63783181922684,3.44169550792555,2.719885334831,12.9528765993076,8.4470934268197,2.24013443548668,4.35377702408431,2.38602451609281,14.2882302531578,6.00677276667578,18.0279577314151,0,0,0,39.401369464041,34.4569417046134,39.4309067111531,8.67797485864856,1.55362730188303,2.3750742250372,16.654591369549,14.6143429589828,14.7593918243877,10.2491395575783,5.52666923537813,2.26199864393416,4.20231445148436,1.44599356919912,4.42305275974937,3.558870698843,5.30019644304944,9.21262980956922,5.59175283654366,3.51336956413857,3.97948742945565,5.10914110417183,138.62609905335,131.378698087556,171.798947002783,2.99581278809645,2.74500361691176,5.15182843662744,2.43354048269187,4.09144731728529,5.40248915854856,6.48965052271031,8.1471491080253,5.10068579501381,10.867078612648,2.31486041475121,24.8530046058764,8.04657365517155,6.12211241338187,12.5084998803643,5.10273743634959,12.811372028485,9.83868107877153,9.8307280880826,12.7185115830377,5.67318240503458,4.22282697993477,7.67185063496512,12.5121262151519,2.78601733217733,7.20237477427802,20.8985980159418,111.651896782804,66.3957600355965,92.6373008029632,4.14251545071004,8.20841209933837,7.02242039697958,2.13070262026689,6.68998387941173,7.0962871928194,4.65067889500816,2.41446061259657,3.38619492864792,4.11399624783701,2.95501435342371,2.02672023864639,4.38599962275997,3.29325172936576,3.75777972529041,2.73376933133365,6.17427674275707,3.63460661282178,5.28901133327089,18.5560777965654,19.9723537799977,3.47942145569652,3.83198696784351,5.11469500843202,4.56541502670142,11.3886974770683,9.55253937399263,16.0854533632172,9.15199771389294,7.60359939764569,1.79763881730844,11.0230405436094,7.76650965692032,8.53505554288868,15.3093006897037,3.38123207019241,15.8848035719345,10.0855293327165,4.83937157243198,3.79419222745544,4.87113488332687,6.43694784149637,4.56569506510662,5.63259991465583,2.8363667971736,4.52085688760367,4.72210436008193,2.84004169943904,5.54707467430559,8.14802725700543,5.75392274901621,12.9708181420028,13.7280706594041,44.5681440234799,8.55924179637558,11.2333562321242,6.56705082662491,6.81710171383266,8.20153986317724,2.95605104266567,7.57965647081939,4.23708938749267,15.9560380628677,12.6732734075791,2.51259386162724,2.14239276797412,3.51240566144038,2.67979744980525,5.09368786192182,1.59454768657487,5.73521601505083,6.90739927463582,6.07526046042349,19.6028669121054,22.3001330365671,4.42587845717133,4.96686143348518,3.85321415970701,4.21962071731931,5.24591825205361,7.32165688892682,11.042787679569,12.1036010731958,7.32439552291516,3.82350076724083,5.79276552614225,3.11384183867716,10.1202675418724,5.84511715822624,2.37172666767914,4.17717711348349,2.12910127812403,21.7240036474051,5.21238269931443,3.46437258242324,2.65490276679926,17.2374251670037,20.2556783166383,11.6935149448657,2.95301892880773,3.68922177532713,5.94385074286909,7.27067458955011,7.84294232446387,4.74055136903724,0,2.06271086496374,9.53230896110606,22.6876978479451,23.5432804484613,22.076714608254,7.09360934569094,15.33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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=115 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:56175406..56175420,- | |||
|id=chr13:56175406..56175420,- | |||
|ontology_enrichment_celltype=CL:0000034!1.12e-07!97;CL:0000723!1.28e-07!91;CL:0000048!1.28e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.11e-07,97;CL:0000723,1.26e-07,91;CL:0000048,1.26e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=13.2923543096979,1.74487703819681,2.27499619694768,1.51232105653415,2.50447864973174,1.84667199103079,1.86890112476421,12.6540856972745,9.85521055061667,6.78787126333781,10.2730780935303,11.4871908953284,11.641649635322,13.5501623749446,2.6648780945253,3.44207954562704,5.59649502502517,11.0411757875383,7.95263714913285,8.06340338416257,6.63337663178344,149.13500870373,76.0091386394302,7.67963629408352,11.2410547722913,2.8711598205751,3.87685796543167,4.30942465371778,9.5011709728187,4.53654233567875,11.3082560434205,0,0,0,11.554064790051,17.6208724080002,15.7210404322024,25.5304294749514,32.0347491254758,16.7527598071615,25.8821854733646,24.589637458504,11.6522484727477,7.30201544258348,5.98123894195136,5.50640256485045,3.12956537739216,10.247182349881,5.93152693383074,5.8328969722285,13.0187372111587,11.5002051491977,12.080347636157,10.1550699881588,10.0828139742739,6.17422646486273,5.15760191889762,4.12537673821954,11.7343547298567,21.1596391708813,8.23980824558033,5.76035704517525,8.00365316500025,16.6481447697059,19.7773272513395,10.6572017241915,11.085204089181,13.0634223809329,10.5763404554647,24.436074838036,15.7743721013537,5.42736870367227,8.83474163806454,11.7591167246356,16.1020391310637,21.1420320920305,12.1127469099328,4.97980618532232,4.14737639791857,9.62769900430415,18.2060410768795,9.89735404057844,7.2587579740359,12.380777420697,9.77908785771585,3.24091444021034,10.1083893367363,10.2519695203915,6.81535739998656,4.53429360640713,4.63783181922684,3.44169550792555,2.719885334831,12.9528765993076,8.4470934268197,2.24013443548668,4.35377702408431,2.38602451609281,14.2882302531578,6.00677276667578,18.0279577314151,0,0,0,39.401369464041,34.4569417046134,39.4309067111531,8.67797485864856,1.55362730188303,2.3750742250372,16.654591369549,14.6143429589828,14.7593918243877,10.2491395575783,5.52666923537813,2.26199864393416,4.20231445148436,1.44599356919912,4.42305275974937,3.558870698843,5.30019644304944,9.21262980956922,5.59175283654366,3.51336956413857,3.97948742945565,5.10914110417183,138.62609905335,131.378698087556,171.798947002783,2.99581278809645,2.74500361691176,5.15182843662744,2.43354048269187,4.09144731728529,5.40248915854856,6.48965052271031,8.1471491080253,5.10068579501381,10.867078612648,2.31486041475121,24.8530046058764,8.04657365517155,6.12211241338187,12.5084998803643,5.10273743634959,12.811372028485,9.83868107877153,9.8307280880826,12.7185115830377,5.67318240503458,4.22282697993477,7.67185063496512,12.5121262151519,2.78601733217733,7.20237477427802,20.8985980159418,111.651896782804,66.3957600355965,92.6373008029632,4.14251545071004,8.20841209933837,7.02242039697958,2.13070262026689,6.68998387941173,7.0962871928194,4.65067889500816,2.41446061259657,3.38619492864792,4.11399624783701,2.95501435342371,2.02672023864639,4.38599962275997,3.29325172936576,3.75777972529041,2.73376933133365,6.17427674275707,3.63460661282178,5.28901133327089,18.5560777965654,19.9723537799977,3.47942145569652,3.83198696784351,5.11469500843202,4.56541502670142,11.3886974770683,9.55253937399263,16.0854533632172,9.15199771389294,7.60359939764569,1.79763881730844,11.0230405436094,7.76650965692032,8.53505554288868,15.3093006897037,3.38123207019241,15.8848035719345,10.0855293327165,4.83937157243198,3.79419222745544,4.87113488332687,6.43694784149637,4.56569506510662,5.63259991465583,2.8363667971736,4.52085688760367,4.72210436008193,2.84004169943904,5.54707467430559,8.14802725700543,5.75392274901621,12.9708181420028,13.7280706594041,44.5681440234799,8.55924179637558,11.2333562321242,6.56705082662491,6.81710171383266,8.20153986317724,2.95605104266567,7.57965647081939,4.23708938749267,15.9560380628677,12.6732734075791,2.51259386162724,2.14239276797412,3.51240566144038,2.67979744980525,5.09368786192182,1.59454768657487,5.73521601505083,6.90739927463582,6.07526046042349,19.6028669121054,22.3001330365671,4.42587845717133,4.96686143348518,3.85321415970701,4.21962071731931,5.24591825205361,7.32165688892682,11.042787679569,12.1036010731958,7.32439552291516,3.82350076724083,5.79276552614225,3.11384183867716,10.1202675418724,5.84511715822624,2.37172666767914,4.17717711348349,2.12910127812403,21.7240036474051,5.21238269931443,3.46437258242324,2.65490276679926,17.2374251670037,20.2556783166383,11.6935149448657,2.95301892880773,3.68922177532713,5.94385074286909,7.27067458955011,7.84294232446387,4.74055136903724,0,2.06271086496374,9.53230896110606,22.6876978479451,23.5432804484613,22.076714608254,7.09360934569094,15.3397183137781,17.6067452044269,10.3518082698964,4.22409074514679,3.38931313382112,1.7642271844397,1.15420377059036,3.87514624070173,2.65376869683886,7.40108532819446,5.0883678920969,8.45294426226567,1.48340241608408,5.29699730473343,13.002372681683,7.77817014952789,11.8672127912955,5.46776910884101,7.77845788902177,81.7596248270444,89.0091236778465,78.6357850947171,28.6401185404534,8.85740782027179,4.47302827679067,13.608672943547,15.6816222010852,13.9752040797554,8.09186078308924,4.05001933054146,10.2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| |||
|short_description=p@chr13:56175406..56175420,- | |||
}} | |||
Revision as of 00:52, 13 September 2013
| Short description: | p@chr13:56175406..56175420, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr13:56175406..56175420, - |
| Coexpression cluster: | MCL_coexpression_mm9:115 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| stem cell | 1.11e-07 | 97 |
| somatic stem cell | 1.26e-07 | 91 |
| multi fate stem cell | 1.26e-07 | 91 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
